CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, vacuole, cytosol

Predictor Summary:

nucleus 1
peroxisome 1
plastid 1
mitochondrion 1
vacuole 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d045318_P001	Maize	cytosol	19.38	83.59
Os06t0152700-01	Rice	cytosol, endoplasmic reticulum, plastid	64.86	65.45
GSMUA_Achr2P03920_001	Banana	mitochondrion	38.41	56.68
GSMUA_Achr2P03930_001	Banana	cytosol	37.68	56.22
EES13178	Sorghum	nucleus	54.17	50.34
GSMUA_Achr1P06820_001	Banana	mitochondrion	29.17	50.16
GSMUA_Achr4P05440_001	Banana	nucleus	39.13	49.54
GSMUA_Achr4P11970_001	Banana	golgi, nucleus, plasma membrane	44.57	46.68
KXG26784	Sorghum	mitochondrion	40.4	43.98
EES07545	Sorghum	plastid	42.03	42.03
GSMUA_Achr1P06810_001	Banana	mitochondrion	41.49	41.56
EES11181	Sorghum	plastid	41.67	41.44
GSMUA_Achr2P03940_001	Banana	mitochondrion	42.21	38.77
EES17717	Sorghum	mitochondrion	31.52	35.01

Protein Annotations

MapMan:35.2	EntrezGene:8069162	EntrezGene:8071332	UniProt:C5Z4C1	EnsemblPlants:EER87863	ProteinID:EER87863
ProteinID:EER87863.2	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004518
GO:GO:0004519	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009451	GO:GO:0009987
GO:GO:0016787	GO:GO:0043231	GO:GO:0090305	InterPro:LipoPS_modifying	PFAM:PF05686	PANTHER:PTHR12203
PANTHER:PTHR12203:SF29	SMART:SM00672	EnsemblPlantsGene:SORBI_3010G042300	UniParc:UPI0001A895C9	RefSeq:XP_002436496.1	RefSeq:XP_002437850.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:3252759..3255918

Molecular Weight (calculated)

62689.7 Da

IEP (calculated)

7.292

GRAVY (calculated)

-0.463

Length

552 amino acids

Sequence
(BLAST)

001: MRSTTVFPAT TSSSGEEGSS PLVAPAMEEI TEEGRTPGKD GAALMVARTE RWLSSSPGTT VLRTSGVRSV MVGFVLLALL LGARRWTGLD APSLIGNTVS
101: IGARQRRRHH IDSTSPLLQI PFTCGNETSP HPHPPKCPGT PALPPPSTPP PLPGDDPAPS CPDYFRYIHD DLRPWRGAGI TREAVERARP HAYFRLVVVG
201: GRAYVETYRR AYQTRDVFTQ WGVLQLLRRY PGRVPDLDIM FACDDPGQVR AADFPTTPSD APPVFRYCKD ALTLDIVFPD WSFWGWPEVG IRPWPQLLEE
301: VRQENERVRW PVRQPYAFWK GNPEGYRIRH ELMRCNASNG QEWNARLFTQ NWHYAIQNGF KDSRIPKQCI YRYKVYVEGN AWSVSEKYIL ACDSPVLFVN
401: TPFQDILSRG LVAGKHYWPI NREHICKSIK FAVDWGNEHP AQAQLIGEQG SQFVREEMSM DYIYDYMLHL LTEYAKLLRY KPTVPEKAVE ICTESMACPA
501: QGMHRDCMMD SMERQVASFN PCTLPPPFTP EEAKEIADRE AEVLRKVEKM EG

Best Arabidopsis Sequence Match ( AT2G45830.1 )
(BLAST)

001: MLQRKSMKRN NNNLLTNKNK YVYLKTASHP AKSIAKATLF LVTSLFISAG LLDLLGCFDF TTFTGLKQVT TSIRKSPITS QRFPNQCGVV QNQTQLFPQN
101: GSSRNNDKPR SSHSRISTCP SYFRWIHEDL RPWKETGVTR GMLEKARRTA HFRVVILDGR VYVKKYRKSI QTRDVFTLWG IVQLLRWYPG RLPDLELMFD
201: PDDRPTVRSK DFQGQQHPAP PPLFRYCSDD ASLDIVFPDW SFWGWAEVNI KPWDKSLVAI EEGNKMTQWK DRVAYAYWRG NPNVAPTRRD LLRCNVSAQE
301: DWNTRLYIQD WDRESREGFK NSNLENQCTH RYKIYIEGWA WSVSEKYIMA CDSMTLYVRP MFYDFYVRGM MPLQHYWPIR DTSKCTSLKF AVHWGNTHLD
401: QASKIGEEGS RFIREEVKME YVYDYMFHLM NEYAKLLKFK PEIPWGATEI TPDIMGCSAT GRWRDFMEES MVMFPSEESP CEMPSPFNPH DLKEILERKT
501: NLTRQVEWWE DQYFHDLANI KKP

Arabidopsis Description

DTA2Downstream target of AGL15 2 [Source:UniProtKB/TrEMBL;Acc:F4IH50]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.