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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 3
  • vacuole 2
  • plasma membrane 2
  • golgi 3
  • plastid 3
  • cytosol 1
  • mitochondrion 2
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:secretory
ChloroP:plastid
EpiLoc:cytosol
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Plant-mPloc:nucleus
Predotar:plastid
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d002836_P006 Maize plastid 89.73 92.05
TraesCS2A01G368900.2 Wheat plastid 74.05 74.05
TraesCS2B01G386200.1 Wheat plastid 73.69 73.96
TraesCS2D01G365600.1 Wheat plastid 73.69 73.69
Os04t0534100-01 Rice mitochondrion 56.76 71.92
VIT_16s0050g00190.t01 Wine grape nucleus 34.41 68.21
GSMUA_Achr5P12260_001 Banana mitochondrion 46.67 68.16
EES07545 Sorghum plastid 64.86 65.22
VIT_02s0025g03710.t01 Wine grape cytosol 31.71 64.71
VIT_16s0050g00160.t01 Wine grape endoplasmic reticulum, golgi, vacuole 53.69 59.72
KRH08971 Soybean cytosol 25.59 59.41
VIT_15s0046g03110.t01 Wine grape cytosol 38.92 57.45
PGSC0003DMT400000701 Potato mitochondrion 7.93 57.14
VIT_15s0046g03140.t01 Wine grape cytosol 23.78 56.65
KRH65106 Soybean cytosol 17.48 56.07
KRH09038 Soybean cytosol 27.03 55.56
VIT_15s0046g03080.t01 Wine grape cytosol 42.16 55.32
VIT_15s0046g03050.t01 Wine grape cytosol 41.98 55.08
VIT_15s0046g03120.t01 Wine grape cytosol 42.7 54.99
CDY69828 Canola mitochondrion 37.84 54.69
PGSC0003DMT400037089 Potato endoplasmic reticulum, golgi, vacuole 50.45 54.47
Solyc03g025760.2.1 Tomato endoplasmic reticulum, golgi 49.55 53.5
KRH09051 Soybean cytosol, nucleus, plasma membrane 25.77 52.96
KRH08981 Soybean plastid 36.04 52.63
Solyc03g025770.2.1 Tomato endoplasmic reticulum, golgi, vacuole 47.21 52.61
Solyc03g025780.2.1 Tomato golgi 47.93 52.47
Bra009709.1-P Field mustard plastid 49.91 51.87
AT5G23850.1 Thale cress endoplasmic reticulum, mitochondrion, peroxisome, plastid 50.45 51.66
CDX88050 Canola plastid 49.55 51.5
CDX80388 Canola plastid 49.37 51.22
VIT_15s0046g03100.t01 Wine grape mitochondrion 11.71 50.78
VIT_15s0046g03150.t01 Wine grape golgi 47.39 50.67
KRH09010 Soybean cytosol, peroxisome, plasma membrane 47.93 50.67
KRH09011 Soybean cytosol 48.65 50.56
Bra018021.1-P Field mustard golgi 48.47 49.81
CDY08097 Canola plastid 48.47 49.18
CDY48932 Canola endoplasmic reticulum 43.42 49.08
Bra007590.1-P Field mustard cytosol 43.42 49.08
KRH40487 Soybean cytosol 30.63 48.99
Bra007592.1-P Field mustard cytosol 29.55 48.96
CDX71753 Canola endoplasmic reticulum 43.24 48.88
Bra007591.1-P Field mustard cytosol 37.84 48.84
CDX71752 Canola cytosol 37.84 48.84
CDY05887 Canola golgi 48.11 48.81
CDY45704 Canola endoplasmic reticulum, golgi 43.78 48.8
KXG26784 Sorghum mitochondrion 44.32 48.52
Solyc01g094390.2.1 Tomato endoplasmic reticulum, golgi, vacuole 41.26 48.52
CDY58789 Canola endoplasmic reticulum, golgi 43.42 48.39
Bra003444.1-P Field mustard endoplasmic reticulum, golgi 43.42 48.39
KRH65090 Soybean extracellular 41.44 48.32
AT3G48980.2 Thale cress plastid 47.39 48.26
KRH77521 Soybean endoplasmic reticulum, nucleus, plasma membrane, plastid 45.23 48.08
KRH48182 Soybean cytosol, golgi, plasma membrane 43.96 47.84
KRH08953 Soybean cytosol, extracellular, nucleus 12.43 47.59
KRH08960 Soybean plastid 17.84 47.37
VIT_15s0046g03130.t01 Wine grape cytosol 18.92 47.3
VIT_15s0046g03070.t01 Wine grape golgi 44.5 47.05
KRG88606 Soybean cytosol 18.02 46.51
KRH48168 Soybean plasma membrane 41.62 46.48
KRH65107 Soybean cytosol 12.79 46.41
AT3G61270.1 Thale cress cytosol, golgi, plasma membrane 41.44 46.18
KRH38478 Soybean cytosol 48.83 46.17
PGSC0003DMT400055754 Potato nucleus 12.61 46.05
AT3G61290.1 Thale cress cytosol 37.66 45.93
AT2G45830.1 Thale cress mitochondrion 42.88 45.51
CDY37069 Canola golgi 42.88 45.51
KRG88612 Soybean cytosol 22.88 45.36
KRH65092 Soybean endoplasmic reticulum, plasma membrane, vacuole 40.54 45.0
CDY27355 Canola golgi, mitochondrion, nucleus, plasma membrane, plastid 42.7 44.89
CDY18897 Canola golgi, mitochondrion, plastid, vacuole 41.26 44.81
VIT_15s0046g03090.t01 Wine grape cytoskeleton, golgi, nucleus 43.06 44.51
CDX89107 Canola mitochondrion 36.22 43.89
Solyc01g094380.2.1 Tomato cytosol, extracellular, golgi, plastid 40.54 43.86
KRH00707 Soybean cytosol 28.83 43.72
AT1G63420.1 Thale cress mitochondrion 44.14 42.39
CDX71750 Canola plasma membrane 39.46 42.12
Solyc05g048800.1.1 Tomato cytosol 18.38 41.98
CDX71749 Canola cytosol, golgi, plasma membrane 32.79 41.94
Bra027639.1-P Field mustard mitochondrion 43.6 41.87
CDY25494 Canola mitochondrion 43.6 41.8
EER87863 Sorghum cytosol, peroxisome, vacuole 41.44 41.67
AT2G45840.1 Thale cress plasma membrane 39.1 41.49
CDY48930 Canola plasma membrane 39.46 41.32
AT3G61280.1 Thale cress plasma membrane 39.82 41.23
Bra007593.1-P Field mustard endoplasmic reticulum, nucleus, plasma membrane 39.28 41.13
CDY18896 Canola golgi, plasma membrane, plastid 29.01 40.86
Bra039310.1-P Field mustard golgi, mitochondrion 31.71 40.74
EES17717 Sorghum mitochondrion 36.22 40.44
VIT_15s0046g03060.t01 Wine grape cytosol 8.47 39.5
CDY48931 Canola plasma membrane 22.7 38.41
VIT_02s0025g03720.t01 Wine grape endoplasmic reticulum, extracellular, plasma membrane 15.14 38.01
EES13178 Sorghum nucleus 40.18 37.54
KRG88496 Soybean cytosol 11.53 36.57
KRH09043 Soybean cytosol, golgi, mitochondrion, plastid 11.17 34.07
Bra004942.1-P Field mustard mitochondrion, peroxisome, plasma membrane, plastid 38.92 33.86
CDX74769 Canola mitochondrion, peroxisome, plasma membrane, plastid 38.56 33.54
PGSC0003DMT400000098 Potato cytosol 41.44 26.53
CDY42493 Canola cytosol 35.86 23.01
Protein Annotations
MapMan:35.2EntrezGene:8083318UniProt:C5YCX6ncoils:CoilEnsemblPlants:EES11181ProteinID:EES11181
ProteinID:EES11181.1GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005623GO:GO:0006629
GO:GO:0006664GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0012505GO:GO:0016740
GO:GO:0046527InterPro:LipoPS_modifyingPFAM:PF05686PANTHER:PTHR12203PANTHER:PTHR12203:SF33SMART:SM00672
EnsemblPlantsGene:SORBI_3006G159900unigene:Sbi.20161TMHMM:TMhelixUniParc:UPI0001A86EF7RefSeq:XP_002446853.1SEG:seg
Description
hypothetical protein
Coordinates
chr6:+:51808544..51815397
Molecular Weight (calculated)
62384.7 Da
IEP (calculated)
9.020
GRAVY (calculated)
-0.343
Length
555 amino acids
Sequence
(BLAST)
001: MATAAPAAAD CRLVRTVLAA ALSRTTAAFL FLSVVAVGVV VSGRWITAAT TAGPLTRLPI TAAIPAAAAV LHHPETQQLQ PPHPSTPPAP PPPSRPTPPP
101: SYSLSCPSLN LSNPAKAPKT SQTLARALSS PSICPASPSP PPPSPSAAGS PSSNNSCPSY FRFIHEDLRP WRAAGGITRA MLDRARLTAT FRLVVLGGRA
201: YVHRLRPAFQ TRDLFTIWGV LQLLRRYPGR VPDLDLMFDT VDWPIVRAHL YRGKYAEMLP PLFRYCGDDK TLDIVFPDWS FWGWPEINIK PWDALQEDLK
301: DGNNRVRWMD REPYAYWKGN PSVSATRKEL VKCNVSSTHD WNARIYAQDW FKESKAGYKD SDLSSQCAHR YKIYIEGSAW SISEKYILAC DSMTLLVTPR
401: YYDFFSRSLM PTQHYWPVRD DNKCASIKYA VDWGNSHKQM AQHIGKQASN FIQEELNMDH VYDYMLHLLT EYAKLLKFKP TKPPEAVEVC SESLVCQAEG
501: LEKKFLVESM VKFARDAGPC DLPPPFDPHE LKLLKQRKEN SIKQIQMWEQ RDLGA
Best Arabidopsis Sequence Match ( AT5G23850.1 )
(BLAST)
001: MRNSPSKNGS AGGHSRTYTD TIWSPFVKSG LGISPNRSYA LVSLLILLIV GAFISTRLLL DTTVLLEKKA ATTTTTKTQT QTITPKYPRP TTVITQSPKP
101: EFTLHCSANE TTASCPSNKY PTTTSFEDDD TNHPPTATCP DYFRWIHEDL RPWSRTGITR EALERAKKTA TFRLAIVGGK IYVEKFQDAF QTRDVFTIWG
201: FLQLLRKYPG KIPDLELMFD CVDWPVVRAT EFAGANAPSP PPLFRYCGNE ETLDIVFPDW SFWGWAEVNI KPWESLLKEL REGNERTKWI NREPYAYWKG
301: NPMVAETRQD LMKCNVSEEH EWNARLYAQD WIKESKEGYK QSDLASQCHH RYKIYIEGSA WSVSEKYILA CDSVTLLVKP HYYDFFTRGL LPAHHYWPVR
401: EHDKCRSIKF AVDWGNSHIQ KAQDIGKAAS DFIQQDLKMD YVYDYMYHLL TEYSKLLQFK PEIPRNAVEI CSETMACLRS GNERKFMTES LVKQPADSGP
501: CAMPPPYDPA TYYEVVKRKQ STNMRILQWE MKYWSKQNQT GS
Arabidopsis Description
At5g23850 [Source:UniProtKB/TrEMBL;Acc:Q9FF95]
SUBAcon: [mitochondrion,endoplasmic reticulum,plastid,peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.