CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
peroxisome 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, peroxisome, plastid
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052744_P001	Maize	cytosol	78.79	78.13
TraesCS7D01G325300.1	Wheat	cytosol	36.7	69.21
TraesCS7A01G328500.1	Wheat	cytosol	59.43	62.37
HORVU0Hr1G021480.1	Barley	cytosol, golgi, nucleus	58.92	61.95
TraesCS7B01G229100.2	Wheat	cytosol, endoplasmic reticulum, plastid	59.76	61.0
TraesCS7D01G325000.2	Wheat	cytosol	55.05	59.24
TraesCS7A01G328300.1	Wheat	endoplasmic reticulum	42.76	59.21
TraesCS7B01G317100.1	Wheat	endoplasmic reticulum	52.69	57.75
TraesCS7D01G410200.1	Wheat	cytosol, extracellular, golgi	52.19	57.62
GSMUA_Achr2P03930_001	Banana	cytosol	35.19	56.49
Os08t0101800-01	Rice	cytosol	54.55	55.96
GSMUA_Achr2P03920_001	Banana	mitochondrion	34.68	55.08
EER87863	Sorghum	cytosol, peroxisome, vacuole	50.34	54.17
GSMUA_Achr4P05440_001	Banana	nucleus	38.55	52.52
GSMUA_Achr1P06820_001	Banana	mitochondrion	27.78	51.4
GSMUA_Achr4P11970_001	Banana	golgi, nucleus, plasma membrane	43.1	48.58
KXG26784	Sorghum	mitochondrion	37.88	44.38
EES07545	Sorghum	plastid	38.22	41.12
EES11181	Sorghum	plastid	37.54	40.18
GSMUA_Achr1P06810_001	Banana	mitochondrion	36.36	39.2
GSMUA_Achr2P03940_001	Banana	mitochondrion	37.71	37.27
EES17717	Sorghum	mitochondrion	30.3	36.22

Protein Annotations

MapMan:35.2	EntrezGene:8067053	UniProt:C5YLC7	EnsemblPlants:EES13178	ProteinID:EES13178	ProteinID:EES13178.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006629	GO:GO:0006664
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0012505	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0046527	InterPro:LipoPS_modifying	ProteinID:OQU79745.1	PFAM:PF05686	PANTHER:PTHR12203
PANTHER:PTHR12203:SF31	SMART:SM00672	EnsemblPlantsGene:SORBI_3007G001100	unigene:Sbi.19023	TMHMM:TMhelix	UniParc:UPI0001A876AF
RefSeq:XP_002443683.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:111944..117146

Molecular Weight (calculated)

67116.2 Da

IEP (calculated)

7.144

GRAVY (calculated)

-0.555

Length

594 amino acids

Sequence
(BLAST)

001: MKKSLEEQRD EEEGAALVPQ HEHRQTISSP SPPHQDPEQS GDDDDDDAHH HHLVAAPAWW RRRAQKLVPT RGVGLVMAGL LVLALLVGSG STSRWIHLDG
101: YASLQSFLLG SGGGMKQHRW LPHHVPSPEA DLVPIPFSCG NGTGSPGTCR RRRDTTTTTV QSSPSPSPSS MPPVASSSKV KSASKKLAPP PPPECPEYFR
201: YIHSDLSPWR ETGITREAVE RGRHRAAFRL VVVDGRAYVE TYHRVFQTRD TFTQWGIAQL LARYPGRVPD LDLMFNCEDM PEVRAADFAA APSQAPPLFR
301: YCKDDSTLDI VFPDWSFWGW PEVNIRPWAP LLEEMAAETA RLPWAEREPY AYWKGNPGVS GERGDLLRCN DSSGEWRTRV FWQDWGAAIR DGFRNSNLAK
401: QCRYRYKIFV RGRSWSVSQK YILACDSPVL LVATPFKDFF SRGLVAGKHY WPIDPGAGKC AGIKFAVDWG NAHPEQARRM AEEGSGFARH DLSMDYVYDY
501: MLHLLTQYAA LLRYKPTVPE NAVELCAETV ACPAAKNNNN REFDFMMESR ERFVADYQPC TLPPPFTDDD IREMARRDQE VRANVHKLMT TMTP

Best Arabidopsis Sequence Match ( AT2G45830.1 )
(BLAST)

001: MLQRKSMKRN NNNLLTNKNK YVYLKTASHP AKSIAKATLF LVTSLFISAG LLDLLGCFDF TTFTGLKQVT TSIRKSPITS QRFPNQCGVV QNQTQLFPQN
101: GSSRNNDKPR SSHSRISTCP SYFRWIHEDL RPWKETGVTR GMLEKARRTA HFRVVILDGR VYVKKYRKSI QTRDVFTLWG IVQLLRWYPG RLPDLELMFD
201: PDDRPTVRSK DFQGQQHPAP PPLFRYCSDD ASLDIVFPDW SFWGWAEVNI KPWDKSLVAI EEGNKMTQWK DRVAYAYWRG NPNVAPTRRD LLRCNVSAQE
301: DWNTRLYIQD WDRESREGFK NSNLENQCTH RYKIYIEGWA WSVSEKYIMA CDSMTLYVRP MFYDFYVRGM MPLQHYWPIR DTSKCTSLKF AVHWGNTHLD
401: QASKIGEEGS RFIREEVKME YVYDYMFHLM NEYAKLLKFK PEIPWGATEI TPDIMGCSAT GRWRDFMEES MVMFPSEESP CEMPSPFNPH DLKEILERKT
501: NLTRQVEWWE DQYFHDLANI KKP

Arabidopsis Description

DTA2Downstream target of AGL15 2 [Source:UniProtKB/TrEMBL;Acc:F4IH50]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.