CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 5
extracellular 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024854_P001	Maize	mitochondrion	85.11	88.12
TraesCS1B01G117800.1	Wheat	mitochondrion	76.66	78.56
TraesCS1A01G089800.1	Wheat	endoplasmic reticulum, golgi, plastid	76.46	78.19
Os05t0149500-01	Rice	extracellular	44.87	75.34
HORVU1Hr1G020420.2	Barley	mitochondrion, plastid	77.46	75.05
TraesCS1D01G098300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	72.43	74.07
GSMUA_Achr7P06580_001	Banana	cytosol	38.43	61.02
KRG98287	Soybean	endoplasmic reticulum, golgi, vacuole	51.51	55.17
Solyc06g076980.2.1	Tomato	unclear	49.7	53.35
PGSC0003DMT400078044	Potato	endoplasmic reticulum, golgi, mitochondrion	49.5	53.13
KRH30306	Soybean	plastid	51.11	51.21
VIT_06s0004g06630.t01	Wine grape	plasma membrane	47.48	50.86
CDY10259	Canola	mitochondrion	49.9	49.3
Bra015563.1-P	Field mustard	mitochondrion	49.9	49.21
CDY06688	Canola	mitochondrion	49.9	49.21
Bra031558.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion	49.5	48.71
CDY59071	Canola	endoplasmic reticulum, golgi, vacuole	49.5	48.43
CDY09932	Canola	endoplasmic reticulum, golgi	49.09	48.41
AT1G07220.1	Thale cress	mitochondrion	49.3	48.32
KXG26784	Sorghum	mitochondrion	40.44	39.65
EES11181	Sorghum	plastid	40.44	36.22
EES07545	Sorghum	plastid	39.64	35.69
EER87863	Sorghum	cytosol, peroxisome, vacuole	35.01	31.52
EES13178	Sorghum	nucleus	36.22	30.3

Protein Annotations

MapMan:35.2	EntrezGene:8075979	UniProt:C5Z040	EnsemblPlants:EES17717	ProteinID:EES17717	ProteinID:EES17717.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006629	GO:GO:0006664
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0012505	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0046527	InterPro:LipoPS_modifying	PFAM:PF05686	PANTHER:PTHR12203	PANTHER:PTHR12203:SF28
SMART:SM00672	EnsemblPlantsGene:SORBI_3009G044700	TMHMM:TMhelix	UniParc:UPI0001A88768	RefSeq:XP_002439287.1	SEG:seg

Description

hypothetical protein

Coordinates

chr9:+:4266426..4268535

Molecular Weight (calculated)

55072.4 Da

IEP (calculated)

8.577

GRAVY (calculated)

-0.375

Length

497 amino acids

Sequence
(BLAST)

001: MAAEGAAGGR GGRAARYPPL SALVISAIAA SSAVIVLAVV HSAYDDALSR TRTLLGHNLE PTPWHPFPHS KGRPPARAAL RCAPSIACLP PLSHPPGTAN
101: ASSSAAAAAG EQRRQCPAYF AAIHRDLAPW RGPGRGVTRA LLDAARRRAS MRVTITGGGR RLHVDLYYAC VQSRALFTVW SLLQLMRRYP GRVPDVDLMF
201: DCMDRPAINR TDHGDGDPSS PPPPPLFRYC TTRDHFDIPF PDWSFWGWPE TNIKPWNREF KSIKMGARAT RWADRVPTAY WKGNPDVASP LRVALLGCND
301: TAAWRAEIMR QNWDDEAKSG YTHSKLSSQC THRYKIYAEG FAWSVSLKYI LSCGSMALLI EPRYEDFFSR GLEPRVNYWP VTETGMCESI RDAVDWGNAN
401: PGEAELVGRR GQRLVQELRM HAVYDYMLHL LTEYARLMDF RPAAPPPSSS SSHDAPQEAC EASVLCLADD KQRRFLEASR AEPAVSDEPC VLPPPPP

Best Arabidopsis Sequence Match ( AT1G07220.1 )
(BLAST)

001: MGLRLRLRLP HKSSPRSPSY LLLCVLALSF FSFTALLFYK VDDFIAQTKT LAGHNLEPTP WHIFPRKSFS AATKHSQAYR ILQCSYFSCP YKAVVQPKSL
101: HSESGSGRQT HQPQCPDFFR WIHRDLEPWA KTGVTKEHVK RAKANAAFRV VILSGKLYVD LYYACVQSRM MFTIWGILQL LTKYPGMVPD VDMMFDCMDK
201: PIINQTEYQS FPVPLFRYCT NEAHLDIPFP DWSFWGWSET NLRPWEEEFG DIKQGSRRRS WYNKQPRAYW KGNPDVVSPI RLELMKCNHS RLWGAQIMRQ
301: DWAEEAKGGF EQSKLSNQCN HRYKIYAEGY AWSVSLKYIL SCGSMTLIIS PEYEDFFSRG LLPKENYWPI SPTDLCRSIK YAVDWGNSNP SEAETIGKRG
401: QGYMESLSMN RVYDYMFHLI TEYSKLQKFK PEKPASANEV CAGSLLCIAE QKERELLERS RVVPSLDQPC KFPVEDRNRL EWLIQQKNKT IENVRYMEMT
501: RTQRGSK

Arabidopsis Description

F10K1.7 protein [Source:UniProtKB/TrEMBL;Acc:Q9LML4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.