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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, endoplasmic reticulum, golgi

Predictor Summary:
  • plastid 1
  • mitochondrion 3
  • endoplasmic reticulum 3
  • nucleus 1
  • extracellular 2
  • vacuole 2
  • plasma membrane 2
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi, mitochondrion
Any Predictor:mitochondrion, nucleus, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Plant-mPloc:nucleus
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY59071 Canola endoplasmic reticulum, golgi, vacuole 100.0 99.41
Bra015563.1-P Field mustard mitochondrion 86.93 87.1
AT1G07220.1 Thale cress mitochondrion 86.93 86.59
GSMUA_Achr7P06580_001 Banana cytosol 40.0 64.54
KRG98287 Soybean endoplasmic reticulum, golgi, vacuole 58.02 63.15
Solyc06g076980.2.1 Tomato unclear 56.83 61.99
PGSC0003DMT400078044 Potato endoplasmic reticulum, golgi, mitochondrion 56.83 61.99
VIT_06s0004g06630.t01 Wine grape plasma membrane 54.46 59.27
KRH30306 Soybean plastid 57.43 58.47
Os05t0149500-01 Rice extracellular 31.29 53.38
TraesCS1B01G117800.1 Wheat mitochondrion 48.91 50.93
Zm00001d024854_P001 Maize mitochondrion 48.32 50.83
TraesCS1A01G089800.1 Wheat endoplasmic reticulum, golgi, plastid 48.91 50.82
TraesCS1D01G098300.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 48.51 50.41
EES17717 Sorghum mitochondrion 48.71 49.5
HORVU1Hr1G020420.2 Barley mitochondrion, plastid 49.11 48.34
Bra007591.1-P Field mustard cytosol 35.64 41.86
Bra007592.1-P Field mustard cytosol 27.33 41.19
Bra007590.1-P Field mustard cytosol 39.21 40.33
Bra003444.1-P Field mustard endoplasmic reticulum, golgi 38.61 39.16
Bra009709.1-P Field mustard plastid 40.59 38.39
Bra018021.1-P Field mustard golgi 39.41 36.85
Bra007593.1-P Field mustard endoplasmic reticulum, nucleus, plasma membrane 38.02 36.23
Bra027639.1-P Field mustard mitochondrion 39.01 34.08
Bra039310.1-P Field mustard golgi, mitochondrion 27.92 32.64
Bra004942.1-P Field mustard mitochondrion, peroxisome, plasma membrane, plastid 36.83 29.15
Protein Annotations
EnsemblPlants:Bra031558.1EnsemblPlants:Bra031558.1-PEnsemblPlantsGene:Bra031558GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:LipoPS_modifyingPANTHER:PTHR12203PANTHER:PTHR12203:SF28PFAM:PF05686SEG:segSMART:SM00672
TMHMM:TMhelixUniParc:UPI000254343FUniProt:M4ERY1MapMan:35.2::
Description
AT1G07220 (E=2e-261) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipopolysaccharide-modifying protein (InterPro:IPR006598), Protein of unknown function DUF821, CAP10-like (InterPro:IPR008539); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23850.1); Has 456 Blast hits to 452 proteins in 94 species: Archae - 0; Bacteria - 34; Metazoa - 198; Fungi - 90; Plants - 113; Viruses - 2; Other Eukaryotes - 19 (source: NCBI BLink).
Coordinates
chrA09:+:35833199..35835210
Molecular Weight (calculated)
58710.5 Da
IEP (calculated)
8.953
GRAVY (calculated)
-0.511
Length
505 amino acids
Sequence
(BLAST)
001: MGLRLRLPQK TSPRSPSYLL LCLLALSFFS FTALLFYKVD DFIAQTKTLA GHNLEPTPWH IFPRKSFSEA SRRSQAYRIL QCSYFSCPYK PVIQPKSLLS
101: DSLSGRKTKQ PKCPDVFRWI QRDLEPWGET GVTKEHVEKA KESAAFRVVI LSGKLYVDLY YACVQSRMMF TVWGILQLLN KYPGMVPDVD MMFDCMDKPI
201: INRTETHSFP APLFRYCTNE AHLDIPFPDW SFWGWSETNL RPWDDEFGDI KQGSKRSSWG SKQPRAYWKG NPDVVSPIRM ELMKCNHSRL WGAQIMRQNW
301: AEEAKGGFEQ SKLANQCNHR YKIYAEGYAW SVSLKYIMSC GSMTLIISPE YEDFFSRGLL PKENYWPVST TDLCRSIKFA VDWGNANPSD AEAIGKRGQG
401: YMESISMNRV YDYMFHLITE YSKLQKFKPE KPYSAKEVCE GSLLCFAEQK ERDLLEKSRA VPSLDRPCTL PDEDRSILQR LIQQKKKTIE DVRHMEMTRT
501: ERGSR
Best Arabidopsis Sequence Match ( AT1G07220.1 )
(BLAST)
001: MGLRLRLRLP HKSSPRSPSY LLLCVLALSF FSFTALLFYK VDDFIAQTKT LAGHNLEPTP WHIFPRKSFS AATKHSQAYR ILQCSYFSCP YKAVVQPKSL
101: HSESGSGRQT HQPQCPDFFR WIHRDLEPWA KTGVTKEHVK RAKANAAFRV VILSGKLYVD LYYACVQSRM MFTIWGILQL LTKYPGMVPD VDMMFDCMDK
201: PIINQTEYQS FPVPLFRYCT NEAHLDIPFP DWSFWGWSET NLRPWEEEFG DIKQGSRRRS WYNKQPRAYW KGNPDVVSPI RLELMKCNHS RLWGAQIMRQ
301: DWAEEAKGGF EQSKLSNQCN HRYKIYAEGY AWSVSLKYIL SCGSMTLIIS PEYEDFFSRG LLPKENYWPI SPTDLCRSIK YAVDWGNSNP SEAETIGKRG
401: QGYMESLSMN RVYDYMFHLI TEYSKLQKFK PEKPASANEV CAGSLLCIAE QKERELLERS RVVPSLDQPC KFPVEDRNRL EWLIQQKNKT IENVRYMEMT
501: RTQRGSK
Arabidopsis Description
F10K1.7 protein [Source:UniProtKB/TrEMBL;Acc:Q9LML4]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.