Factsheet for Bra027639.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 4
plasma membrane 2
nucleus 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY25494	Canola	mitochondrion	98.1	97.93
AT1G63420.1	Thale cress	mitochondrion	84.95	84.95
VIT_02s0025g03710.t01	Wine grape	cytosol	29.24	62.13
GSMUA_Achr5P12260_001	Banana	mitochondrion	37.37	56.84
KRH77521	Soybean	endoplasmic reticulum, nucleus, plasma membrane, plastid	48.96	54.21
PGSC0003DMT400000701	Potato	mitochondrion	7.09	53.25
Bra007591.1-P	Field mustard	cytosol	37.02	49.77
Bra007592.1-P	Field mustard	cytosol	28.72	49.55
VIT_02s0025g03720.t01	Wine grape	endoplasmic reticulum, extracellular, plasma membrane	18.86	49.32
Os02t0642700-01	Rice	plastid	40.14	48.95
Bra007590.1-P	Field mustard	cytosol	41.18	48.47
Bra003444.1-P	Field mustard	endoplasmic reticulum, golgi	41.0	47.59
TraesCS2B01G093400.1	Wheat	golgi, mitochondrion, plastid	40.66	46.81
HORVU6Hr1G060750.4	Barley	cytosol, peroxisome	39.97	46.48
Bra009709.1-P	Field mustard	plastid	42.73	46.25
TraesCS6A01G237500.1	Wheat	cytosol, mitochondrion	37.2	45.84
TraesCS2D01G365600.1	Wheat	plastid	43.77	45.59
TraesCS2B01G386200.1	Wheat	plastid	43.08	45.03
Bra018021.1-P	Field mustard	golgi	41.87	44.81
TraesCS6D01G220200.2	Wheat	cytosol, mitochondrion	36.85	44.47
Zm00001d051287_P001	Maize	plastid	42.21	44.28
EES07545	Sorghum	plastid	42.21	44.2
Zm00001d002836_P006	Maize	plastid	41.35	44.18
TraesCS2A01G368900.2	Wheat	plastid	42.39	44.14
EES11181	Sorghum	plastid	41.87	43.6
Bra007593.1-P	Field mustard	endoplasmic reticulum, nucleus, plasma membrane	38.75	42.26
TraesCSU01G025200.1	Wheat	plastid	41.0	42.1
Os04t0534100-01	Rice	mitochondrion	31.49	41.55
Bra039310.1-P	Field mustard	golgi, mitochondrion	30.8	41.2
TraesCS6B01G266000.1	Wheat	plastid	42.39	40.1
Bra015563.1-P	Field mustard	mitochondrion	34.26	39.29
Bra031558.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion	34.08	39.01
Bra004942.1-P	Field mustard	mitochondrion, peroxisome, plasma membrane, plastid	38.93	35.27

Protein Annotations

EnsemblPlants:Bra027639.1	EnsemblPlants:Bra027639.1-P	EnsemblPlantsGene:Bra027639	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005768	GO:GO:0005794	GO:GO:0005802	GO:GO:0016020	GO:GO:0016021
InterPro:LipoPS_modifying	PANTHER:PTHR12203	PANTHER:PTHR12203:SF59	PFAM:PF05686	SEG:seg	SMART:SM00672
TMHMM:TMhelix	UniParc:UPI000254247A	UniProt:M4EFS6	MapMan:35.2	:	:

Description

AT1G63420 (E=1e-270) | INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lipopolysaccharide-modifying protein (InterPro:IPR006598), Protein of unknown function DUF821, CAP10-like (InterPro:IPR008539); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23850.1); Has 456 Blast hits to 452 proteins in 97 species: Archae - 0; Bacteria - 32; Metazoa - 199; Fungi - 74; Plants - 114; Viruses - 7; Other Eukaryotes - 30 (source: NCBI BLink).

Coordinates

chrA09:-:7206063..7208980

Molecular Weight (calculated)

66770.9 Da

IEP (calculated)

9.625

GRAVY (calculated)

-0.533

Length

578 amino acids

Sequence
(BLAST)

001: MTSLFSKPRA LTSLVSHFKT YRPITGKLHV ATLTLLLFLV AAAVAVTSSL WLSKTTKQFD RPTLVTTKPV PELESPQKTG VLVNCTSFLN KNRSGSCSRT
101: SLWLNKTKSY NPPTIITTKP VHAPVPVPEK KSTKKTRISV DCTSFLNQNR SGSCSRTAQP GYKDQTESNR ACPDYFKWIH VDLKPWRETG ITREMVERGQ
201: TTAHFRLLIV NGKVFVENYK KSIQTRDVFT LWGILQLLRK YPGKLPDVDL MFDCDDRPVI RSDGYDKSNL TAENAPPVLF RYGGDRWTAD IVFPDWSFWG
301: WQEINIKPWS KVLKEMEEGK KKKKFMERES YAYWKGNPFV ASPSREDLLT CNLSSQHDWN ARIFIQDWIS EGQKGFENSN VADQCTYRYK IYIEGYGWSV
401: SEKYILACDS VTLMVKPYYY DFFSRTLQPL QHYWPINDKN KCRSIKFAVD WLNNHTQKAQ EIGRGASEFM QRDLSMENVY DYMFHLLNEY SKLLKFKPQV
501: SQNSVEICTE AMVCPSGNAN GTNKKFLMGS LVDEPHISGP CSLPPPFDPN GLEKFHRKKL NLIRQVEKWE HAYWKNVQ

Best Arabidopsis Sequence Match ( AT1G63420.1 )
(BLAST)

001: MTSLFSKPRA LTSHITNFKT YRPVIGKLHV ATLTLLLFLI AAGIAVTSSL WLNKTTKAFD RPTLVATKPE PELEPPHETG VLVNCTSFLN QNRSGSCSRT
101: PLLNKKKPSH RPTITTIKPV PVRVSEKKSP EETGSSVDCS SFLNQNRSGS CSRTLQSGYN QNQTESNRSC PDYFKWIHED LKPWRETGIT KEMVERGKTT
201: AHFRLVILNG KVFVENYKKS IQTRDAFTLW GILQLLRKYP GKLPDVDLMF DCDDRPVIRS DGYNILNRTV ENAPPPLFRY CGDRWTVDIV FPDWSFWGWQ
301: EINIREWSKV LKEMEEGKKK KKFMERDAYA YWKGNPFVAS PSREDLLTCN LSSLHDWNAR IFIQDWISEG QRGFENSNVA NQCTYRYKIY IEGYAWSVSE
401: KYILACDSVT LMVKPYYYDF FSRTLQPLQH YWPIRDKDKC RSIKFAVDWL NNHTQKAQEI GREASEFMQR DLSMENVYDY MFHLLNEYSK LLKYKPQVPK
501: NSVELCTEAL VCPSEGEDVN GVDKKFMIGS LVSRPHASGP CSLPPPFDSN GLEKFHRKKL NLIRQVEKWE DSYWQKVL

Arabidopsis Description

Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:F4I232]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.