Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400000701 | Potato | mitochondrion | 19.91 | 57.14 |
| VIT_15s0046g03060.t01 | Wine grape | cytosol | 17.19 | 31.93 |
| VIT_16s0050g00160.t01 | Wine grape | endoplasmic reticulum, golgi, vacuole | 52.94 | 23.45 |
| VIT_15s0046g03150.t01 | Wine grape | golgi | 54.3 | 23.12 |
| VIT_15s0046g03080.t01 | Wine grape | cytosol | 42.99 | 22.46 |
| VIT_15s0046g03050.t01 | Wine grape | cytosol | 41.18 | 21.51 |
| KRH77521 | Soybean | endoplasmic reticulum, nucleus, plasma membrane, plastid | 49.32 | 20.88 |
| VIT_15s0046g03120.t01 | Wine grape | cytosol | 39.82 | 20.42 |
| AT1G63420.1 | Thale cress | mitochondrion | 50.23 | 19.2 |
| Os04t0534100-01 | Rice | mitochondrion | 38.01 | 19.18 |
| VIT_15s0046g03070.t01 | Wine grape | golgi | 45.25 | 19.05 |
| Bra027639.1-P | Field mustard | mitochondrion | 49.32 | 18.86 |
| CDY25494 | Canola | mitochondrion | 48.87 | 18.65 |
| HORVU6Hr1G060750.4 | Barley | cytosol, peroxisome | 41.63 | 18.51 |
| VIT_15s0046g03140.t01 | Wine grape | cytosol | 19.46 | 18.45 |
| GSMUA_Achr5P12260_001 | Banana | mitochondrion | 31.67 | 18.42 |
| Os02t0642700-01 | Rice | plastid | 39.37 | 18.35 |
| Zm00001d051287_P001 | Maize | plastid | 44.34 | 17.79 |
| EES07545 | Sorghum | plastid | 43.89 | 17.57 |
| TraesCS2B01G093400.1 | Wheat | golgi, mitochondrion, plastid | 39.82 | 17.53 |
| VIT_15s0046g03090.t01 | Wine grape | cytoskeleton, golgi, nucleus | 42.53 | 17.5 |
| VIT_06s0004g06630.t01 | Wine grape | plasma membrane | 35.75 | 17.03 |
| VIT_15s0046g03110.t01 | Wine grape | cytosol | 28.96 | 17.02 |
| TraesCS6B01G266000.1 | Wheat | plastid | 45.7 | 16.53 |
| TraesCSU01G025200.1 | Wheat | plastid | 41.18 | 16.16 |
| Zm00001d002836_P006 | Maize | plastid | 38.46 | 15.71 |
| TraesCS2D01G365600.1 | Wheat | plastid | 38.46 | 15.32 |
| TraesCS2A01G368900.2 | Wheat | plastid | 38.46 | 15.32 |
| EES11181 | Sorghum | plastid | 38.01 | 15.14 |
| TraesCS2B01G386200.1 | Wheat | plastid | 37.56 | 15.01 |
| TraesCS6A01G237500.1 | Wheat | cytosol, mitochondrion | 29.86 | 14.07 |
| TraesCS6D01G220200.2 | Wheat | cytosol, mitochondrion | 29.86 | 13.78 |
| VIT_15s0046g03100.t01 | Wine grape | mitochondrion | 1.36 | 2.34 |
| VIT_15s0046g03130.t01 | Wine grape | cytosol | 0.9 | 0.9 |
| VIT_16s0050g00190.t01 | Wine grape | nucleus | 0.9 | 0.71 |
| VIT_02s0025g03710.t01 | Wine grape | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:35.2 | ProteinID:CCB58361 | ProteinID:CCB58361.1 | UniProt:F6HUD8 | EMBL:FN596251 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0006629 | GO:GO:0006664 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0012505 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 |
| GO:GO:0046527 | InterPro:LipoPS_modifying | PFAM:PF05686 | PANTHER:PTHR12203 | PANTHER:PTHR12203:SF28 | TMHMM:TMhelix |
| UniParc:UPI0002108079 | ArrayExpress:VIT_02s0025g03720 | EnsemblPlantsGene:VIT_02s0025g03720 | EnsemblPlants:VIT_02s0025g03720.t01 | SEG:seg | : |
Description
No Description!
Coordinates
chr2:-:3230756..3231545
Molecular Weight (calculated)
25845.3 Da
IEP (calculated)
10.021
GRAVY (calculated)
-0.167
Length
221 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKAPAACSI TIYTFFLFFI LFVAAAFISF FCFSSRFIFL VNNSERKAVP ISENHRKTPR PIVVPLNCSA RNLTQTCPGN YPTTFDTDLA WKPVCPDYFR
101: WIHEDLKPWK TTGISRDMVE RAKRSAHFRL VIVKGKVYIE KYKKSIQTRD VFTIWGILQL LRRYPGKLLD LELTFDCNDR PVIRSGDHRG PNSTSPPPLF
201: RYCGDRWTLD VVFPDWSFWG W
101: WIHEDLKPWK TTGISRDMVE RAKRSAHFRL VIVKGKVYIE KYKKSIQTRD VFTIWGILQL LRRYPGKLLD LELTFDCNDR PVIRSGDHRG PNSTSPPPLF
201: RYCGDRWTLD VVFPDWSFWG W
001: MTSLFSKPRA LTSHITNFKT YRPVIGKLHV ATLTLLLFLI AAGIAVTSSL WLNKTTKAFD RPTLVATKPE PELEPPHETG VLVNCTSFLN QNRSGSCSRT
101: PLLNKKKPSH RPTITTIKPV PVRVSEKKSP EETGSSVDCS SFLNQNRSGS CSRTLQSGYN QNQTESNRSC PDYFKWIHED LKPWRETGIT KEMVERGKTT
201: AHFRLVILNG KVFVENYKKS IQTRDAFTLW GILQLLRKYP GKLPDVDLMF DCDDRPVIRS DGYNILNRTV ENAPPPLFRY CGDRWTVDIV FPDWSFWGWQ
301: EINIREWSKV LKEMEEGKKK KKFMERDAYA YWKGNPFVAS PSREDLLTCN LSSLHDWNAR IFIQDWISEG QRGFENSNVA NQCTYRYKIY IEGYAWSVSE
401: KYILACDSVT LMVKPYYYDF FSRTLQPLQH YWPIRDKDKC RSIKFAVDWL NNHTQKAQEI GREASEFMQR DLSMENVYDY MFHLLNEYSK LLKYKPQVPK
501: NSVELCTEAL VCPSEGEDVN GVDKKFMIGS LVSRPHASGP CSLPPPFDSN GLEKFHRKKL NLIRQVEKWE DSYWQKVL
101: PLLNKKKPSH RPTITTIKPV PVRVSEKKSP EETGSSVDCS SFLNQNRSGS CSRTLQSGYN QNQTESNRSC PDYFKWIHED LKPWRETGIT KEMVERGKTT
201: AHFRLVILNG KVFVENYKKS IQTRDAFTLW GILQLLRKYP GKLPDVDLMF DCDDRPVIRS DGYNILNRTV ENAPPPLFRY CGDRWTVDIV FPDWSFWGWQ
301: EINIREWSKV LKEMEEGKKK KKFMERDAYA YWKGNPFVAS PSREDLLTCN LSSLHDWNAR IFIQDWISEG QRGFENSNVA NQCTYRYKIY IEGYAWSVSE
401: KYILACDSVT LMVKPYYYDF FSRTLQPLQH YWPIRDKDKC RSIKFAVDWL NNHTQKAQEI GREASEFMQR DLSMENVYDY MFHLLNEYSK LLKYKPQVPK
501: NSVELCTEAL VCPSEGEDVN GVDKKFMIGS LVSRPHASGP CSLPPPFDSN GLEKFHRKKL NLIRQVEKWE DSYWQKVL
Arabidopsis Description
Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:F4I232]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.