Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_16s0050g00190.t01 | Wine grape | nucleus | 74.26 | 72.14 |
| VIT_15s0046g03130.t01 | Wine grape | cytosol | 45.59 | 55.86 |
| VIT_15s0046g03100.t01 | Wine grape | mitochondrion | 24.63 | 52.34 |
| GSMUA_Achr5P12260_001 | Banana | mitochondrion | 67.65 | 48.42 |
| VIT_15s0046g03110.t01 | Wine grape | cytosol | 66.91 | 48.4 |
| VIT_15s0046g03140.t01 | Wine grape | cytosol | 37.13 | 43.35 |
| VIT_16s0050g00160.t01 | Wine grape | endoplasmic reticulum, golgi, vacuole | 74.63 | 40.68 |
| VIT_15s0046g03080.t01 | Wine grape | cytosol | 59.56 | 38.3 |
| VIT_15s0046g03120.t01 | Wine grape | cytosol | 60.66 | 38.28 |
| VIT_15s0046g03050.t01 | Wine grape | cytosol | 58.46 | 37.59 |
| TraesCS6A01G237500.1 | Wheat | cytosol, mitochondrion | 63.24 | 36.67 |
| TraesCS6D01G220200.2 | Wheat | cytosol, mitochondrion | 63.97 | 36.33 |
| KRH77521 | Soybean | endoplasmic reticulum, nucleus, plasma membrane, plastid | 68.38 | 35.63 |
| Os02t0642700-01 | Rice | plastid | 61.76 | 35.44 |
| VIT_15s0046g03150.t01 | Wine grape | golgi | 66.91 | 35.07 |
| HORVU6Hr1G060750.4 | Barley | cytosol, peroxisome | 62.5 | 34.21 |
| TraesCS2B01G093400.1 | Wheat | golgi, mitochondrion, plastid | 61.76 | 33.47 |
| Zm00001d002836_P006 | Maize | plastid | 64.71 | 32.53 |
| EES11181 | Sorghum | plastid | 64.71 | 31.71 |
| VIT_15s0046g03070.t01 | Wine grape | golgi | 60.29 | 31.24 |
| Zm00001d051287_P001 | Maize | plastid | 62.13 | 30.67 |
| TraesCS2D01G365600.1 | Wheat | plastid | 62.13 | 30.45 |
| TraesCS2B01G386200.1 | Wheat | plastid | 61.76 | 30.38 |
| EES07545 | Sorghum | plastid | 61.4 | 30.25 |
| TraesCS2A01G368900.2 | Wheat | plastid | 61.03 | 29.91 |
| TraesCSU01G025200.1 | Wheat | plastid | 61.76 | 29.84 |
| VIT_15s0046g03090.t01 | Wine grape | cytoskeleton, golgi, nucleus | 58.46 | 29.61 |
| Bra027639.1-P | Field mustard | mitochondrion | 62.13 | 29.24 |
| AT1G63420.1 | Thale cress | mitochondrion | 61.76 | 29.07 |
| CDY25494 | Canola | mitochondrion | 61.4 | 28.84 |
| TraesCS6B01G266000.1 | Wheat | plastid | 63.24 | 28.15 |
| VIT_06s0004g06630.t01 | Wine grape | plasma membrane | 41.54 | 24.35 |
| Os04t0534100-01 | Rice | mitochondrion | 38.97 | 24.2 |
| VIT_15s0046g03060.t01 | Wine grape | cytosol | 5.88 | 13.45 |
| VIT_02s0025g03720.t01 | Wine grape | endoplasmic reticulum, extracellular, plasma membrane | 0.0 | 0.0 |
| PGSC0003DMT400000701 | Potato | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| MapMan:35.2 | ProteinID:CCB58360 | ProteinID:CCB58360.1 | UniProt:F6HUD7 | EMBL:FN596251 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0006629 | GO:GO:0006664 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0012505 | GO:GO:0016740 | GO:GO:0046527 | InterPro:LipoPS_modifying |
| PFAM:PF05686 | PANTHER:PTHR12203 | PANTHER:PTHR12203:SF59 | SMART:SM00672 | UniParc:UPI0002108078 | ArrayExpress:VIT_02s0025g03710 |
| EnsemblPlantsGene:VIT_02s0025g03710 | EnsemblPlants:VIT_02s0025g03710.t01 | RefSeq:XP_002269577 | RefSeq:XP_002269577.2 | : | : |
Description
No Description!
Coordinates
chr2:-:3227601..3228708
Molecular Weight (calculated)
31957.1 Da
IEP (calculated)
8.036
GRAVY (calculated)
-0.626
Length
272 amino acids
Sequence
(BLAST)
(BLAST)
001: MKPWGNLLKD LKEGNNRTKW MEREPYAYWK GNPLVAETRR DLLTCNVSDV QDWNARLFVQ DWMLESQQGY KQSDVSNQCT HRYKIYIEGW AWSVSEKYIL
101: ACDSVTLMVK PRYYDFFMRS LQPVHHYWPI KDNDKCRSIK FAVDWGNSHK QKAQAIGKAA SDFIQEELKM DYVYDYMFHL LNEYAKLLRF KPTIPEGAVE
201: VCSETVACSA EGVEKKFMME SLVNSPSVTS PCALPPPYDP PVLGALLRKK ANSIKQVERW ENRYWENLNQ QH
101: ACDSVTLMVK PRYYDFFMRS LQPVHHYWPI KDNDKCRSIK FAVDWGNSHK QKAQAIGKAA SDFIQEELKM DYVYDYMFHL LNEYAKLLRF KPTIPEGAVE
201: VCSETVACSA EGVEKKFMME SLVNSPSVTS PCALPPPYDP PVLGALLRKK ANSIKQVERW ENRYWENLNQ QH
001: MTSLFSKPRA LTSHITNFKT YRPVIGKLHV ATLTLLLFLI AAGIAVTSSL WLNKTTKAFD RPTLVATKPE PELEPPHETG VLVNCTSFLN QNRSGSCSRT
101: PLLNKKKPSH RPTITTIKPV PVRVSEKKSP EETGSSVDCS SFLNQNRSGS CSRTLQSGYN QNQTESNRSC PDYFKWIHED LKPWRETGIT KEMVERGKTT
201: AHFRLVILNG KVFVENYKKS IQTRDAFTLW GILQLLRKYP GKLPDVDLMF DCDDRPVIRS DGYNILNRTV ENAPPPLFRY CGDRWTVDIV FPDWSFWGWQ
301: EINIREWSKV LKEMEEGKKK KKFMERDAYA YWKGNPFVAS PSREDLLTCN LSSLHDWNAR IFIQDWISEG QRGFENSNVA NQCTYRYKIY IEGYAWSVSE
401: KYILACDSVT LMVKPYYYDF FSRTLQPLQH YWPIRDKDKC RSIKFAVDWL NNHTQKAQEI GREASEFMQR DLSMENVYDY MFHLLNEYSK LLKYKPQVPK
501: NSVELCTEAL VCPSEGEDVN GVDKKFMIGS LVSRPHASGP CSLPPPFDSN GLEKFHRKKL NLIRQVEKWE DSYWQKVL
101: PLLNKKKPSH RPTITTIKPV PVRVSEKKSP EETGSSVDCS SFLNQNRSGS CSRTLQSGYN QNQTESNRSC PDYFKWIHED LKPWRETGIT KEMVERGKTT
201: AHFRLVILNG KVFVENYKKS IQTRDAFTLW GILQLLRKYP GKLPDVDLMF DCDDRPVIRS DGYNILNRTV ENAPPPLFRY CGDRWTVDIV FPDWSFWGWQ
301: EINIREWSKV LKEMEEGKKK KKFMERDAYA YWKGNPFVAS PSREDLLTCN LSSLHDWNAR IFIQDWISEG QRGFENSNVA NQCTYRYKIY IEGYAWSVSE
401: KYILACDSVT LMVKPYYYDF FSRTLQPLQH YWPIRDKDKC RSIKFAVDWL NNHTQKAQEI GREASEFMQR DLSMENVYDY MFHLLNEYSK LLKYKPQVPK
501: NSVELCTEAL VCPSEGEDVN GVDKKFMIGS LVSRPHASGP CSLPPPFDSN GLEKFHRKKL NLIRQVEKWE DSYWQKVL
Arabidopsis Description
Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:F4I232]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.