Factsheet for VIT_15s0046g03100.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
plasma membrane 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_15s0046g03140.t01	Wine grape	cytosol	78.91	43.35
VIT_15s0046g03130.t01	Wine grape	cytosol	69.53	40.09
VIT_16s0050g00190.t01	Wine grape	nucleus	53.91	24.64
VIT_02s0025g03710.t01	Wine grape	cytosol	52.34	24.63
Bra007592.1-P	Field mustard	cytosol	60.16	22.99
VIT_15s0046g03110.t01	Wine grape	cytosol	55.47	18.88
KRH40487	Soybean	cytosol	50.78	18.73
GSMUA_Achr5P12260_001	Banana	mitochondrion	55.47	18.68
Bra007591.1-P	Field mustard	cytosol	59.38	17.67
CDX71752	Canola	cytosol	59.38	17.67
CDX89107	Canola	mitochondrion	60.94	17.03
AT3G61290.1	Thale cress	cytosol	59.38	16.7
VIT_15s0046g03120.t01	Wine grape	cytosol	53.91	16.01
VIT_15s0046g03050.t01	Wine grape	cytosol	52.34	15.84
VIT_15s0046g03080.t01	Wine grape	cytosol	50.78	15.37
CDX71750	Canola	plasma membrane	60.94	15.0
CDX71749	Canola	cytosol, golgi, plasma membrane	50.78	14.98
TraesCS6A01G237500.1	Wheat	cytosol, mitochondrion	54.69	14.93
VIT_15s0046g03150.t01	Wine grape	golgi	60.16	14.84
TraesCS6D01G220200.2	Wheat	cytosol, mitochondrion	54.69	14.61
VIT_16s0050g00160.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	56.25	14.43
CDY48930	Canola	plasma membrane	59.38	14.34
Bra007593.1-P	Field mustard	endoplasmic reticulum, nucleus, plasma membrane	58.59	14.15
Os02t0642700-01	Rice	plastid	51.56	13.92
HORVU6Hr1G060750.4	Barley	cytosol, peroxisome	53.91	13.88
KRH65090	Soybean	extracellular	51.56	13.87
AT3G61280.1	Thale cress	plasma membrane	57.81	13.81
AT2G45840.1	Thale cress	plasma membrane	55.47	13.58
TraesCS2B01G093400.1	Wheat	golgi, mitochondrion, plastid	52.34	13.35
VIT_15s0046g03070.t01	Wine grape	golgi	54.69	13.33
CDY18896	Canola	golgi, plasma membrane, plastid	39.84	12.94
KRH48168	Soybean	plasma membrane	50.0	12.88
Os04t0534100-01	Rice	mitochondrion	43.75	12.79
VIT_15s0046g03090.t01	Wine grape	cytoskeleton, golgi, nucleus	53.12	12.66
KRH65092	Soybean	endoplasmic reticulum, plasma membrane, vacuole	49.22	12.6
Zm00001d051287_P001	Maize	plastid	53.91	12.52
EES07545	Sorghum	plastid	53.91	12.5
Zm00001d002836_P006	Maize	plastid	50.78	12.01
TraesCSU01G025200.1	Wheat	plastid	52.34	11.9
TraesCS2B01G386200.1	Wheat	plastid	50.78	11.75
KRH00707	Soybean	cytosol	33.59	11.75
TraesCS2D01G365600.1	Wheat	plastid	50.78	11.71
TraesCS2A01G368900.2	Wheat	plastid	50.78	11.71
EES11181	Sorghum	plastid	50.78	11.71
TraesCS6B01G266000.1	Wheat	plastid	53.91	11.29
VIT_06s0004g06630.t01	Wine grape	plasma membrane	40.62	11.21
CDY42493	Canola	cytosol	60.16	8.9
VIT_15s0046g03060.t01	Wine grape	cytosol	6.25	6.72
VIT_02s0025g03720.t01	Wine grape	endoplasmic reticulum, extracellular, plasma membrane	2.34	1.36
CDY48931	Canola	plasma membrane	3.12	1.22

Protein Annotations

ArrayExpress:VIT_15s0046g03100	EMBL:FN596755	EnsemblPlants:VIT_15s0046g03100.t01	EnsemblPlantsGene:VIT_15s0046g03100	InterPro:LipoPS_modifying	PANTHER:PTHR12203
PANTHER:PTHR12203:SF28	PFAM:PF05686	ProteinID:CBI40331	ProteinID:CBI40331.3	SMART:SM00672	UniParc:UPI00015CA711
UniProt:D7UC66	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr15:-:19708709..19729106

Molecular Weight (calculated)

15129.6 Da

IEP (calculated)

9.839

GRAVY (calculated)

-0.319

Length

128 amino acids

Sequence
(BLAST)

001: MLLIYLFTKK KLGKRIQGGF KNSNLADQCT HRYKIYVEGW GWSVSEKYVL ACDSMTLLIK PYHHDFFTRS MVPLPHYWPI RPRNKCRDLK FAVEWGNTHP
101: EKAQEIGKAG SNFIHQRWIL CMTTCFIC

Best Arabidopsis Sequence Match ( AT3G61270.1 )
(BLAST)

001: MKMNNNDGQH NKTVTFPRKS IVKATVFIVV LFISAAILDL LGYLDFNAFA GLKLTTKTKE PNPYGCDFVQ NQSSQTPISQ NRKSRLNPNN SSKSSTCPSY
101: FRWIHEDLRP WKQTGITRGM IEEASRTAHF RLVIRNGKAY VKRYKKSIQT RDEFTLWGIL QLLRWYPGKL PDLELMFDAD DRPVVRSVDF IGQQKEPPPV
201: FRYCSDDASL DIVFPDWSFW GWAEVNVKPW GKSLEAIKEG NSMTQWKDRV AYAYWRGNPY VDPGRGDLLK CNATEHEEWN TRLYIQDWDK ETKEGFKNSN
301: LENQCTHRYK IYIEGWAWSV SEKYIMACDS MTLYVKPRFY DFYIRGMMPL QHYWPIRDDS KCTSLKFAVH WGNTHEDKAR EIGEVGSRFI REEVNMQYVY
401: DYMFHLLKEY ATLLKFKPEI PLDAEEITPD SMGCPATERW RDFKAESMII SPSEESPCEM LPPYDPLALK EVLERKANLT RQVELWENQY FQNLTNKP

Arabidopsis Description

Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:Q9M2D7]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.