CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007593.1-P	Field mustard	endoplasmic reticulum, nucleus, plasma membrane	98.68	98.68
CDX71749	Canola	cytosol, golgi, plasma membrane	74.72	91.24
CDX71750	Canola	plasma membrane	84.34	85.96
CDX71752	Canola	cytosol	67.17	82.79
CDY48931	Canola	plasma membrane	50.75	82.01
CDX89107	Canola	mitochondrion	64.34	74.45
VIT_15s0046g03100.t01	Wine grape	mitochondrion	14.34	59.38
VIT_15s0046g03140.t01	Wine grape	cytosol	24.72	56.22
CDY18896	Canola	golgi, plasma membrane, plastid	40.94	55.08
CDY69828	Canola	mitochondrion	38.49	53.12
KRH40487	Soybean	cytosol	34.72	53.03
GSMUA_Achr5P12260_001	Banana	mitochondrion	37.74	52.63
KRH00707	Soybean	cytosol	33.77	48.91
CDX71753	Canola	endoplasmic reticulum	44.91	48.47
CDY48932	Canola	endoplasmic reticulum	44.91	48.47
CDY45704	Canola	endoplasmic reticulum, golgi	45.09	47.99
KRH65090	Soybean	extracellular	43.02	47.9
CDY37069	Canola	golgi	46.98	47.61
CDY58789	Canola	endoplasmic reticulum, golgi	44.72	47.59
CDY27355	Canola	golgi, mitochondrion, nucleus, plasma membrane, plastid	47.17	47.35
CDY18897	Canola	golgi, mitochondrion, plastid, vacuole	45.28	46.97
KRH48168	Soybean	plasma membrane	43.58	46.48
Os02t0642700-01	Rice	plastid	40.94	45.78
KRH65092	Soybean	endoplasmic reticulum, plasma membrane, vacuole	43.02	45.6
VIT_15s0046g03130.t01	Wine grape	cytosol	19.06	45.5
CDX88050	Canola	plastid	44.91	44.57
CDY08097	Canola	plastid	45.66	44.24
CDX80388	Canola	plastid	44.34	43.93
CDY05887	Canola	golgi	45.28	43.88
HORVU6Hr1G060750.4	Barley	cytosol, peroxisome	40.57	43.26
EES07545	Sorghum	plastid	43.58	41.85
TraesCS2B01G093400.1	Wheat	golgi, mitochondrion, plastid	39.62	41.83
Zm00001d051287_P001	Maize	plastid	43.02	41.38
CDX74769	Canola	mitochondrion, peroxisome, plasma membrane, plastid	49.43	41.07
TraesCS6D01G220200.2	Wheat	cytosol, mitochondrion	36.98	40.92
Os04t0534100-01	Rice	mitochondrion	33.77	40.87
Zm00001d002836_P006	Maize	plastid	41.7	40.85
TraesCS6A01G237500.1	Wheat	cytosol, mitochondrion	36.04	40.72
EES11181	Sorghum	plastid	41.32	39.46
CDY42493	Canola	cytosol	64.15	39.31
CDY25494	Canola	mitochondrion	42.45	38.86
TraesCSU01G025200.1	Wheat	plastid	41.13	38.72
TraesCS2B01G386200.1	Wheat	plastid	40.19	38.52
TraesCS2D01G365600.1	Wheat	plastid	40.0	38.2
CDY10259	Canola	mitochondrion	36.23	38.17
TraesCS2A01G368900.2	Wheat	plastid	39.81	38.02
CDY06688	Canola	mitochondrion	36.04	37.9
CDY59071	Canola	endoplasmic reticulum, golgi, vacuole	36.23	37.8
CDY09932	Canola	endoplasmic reticulum, golgi	35.66	37.5
TraesCS6B01G266000.1	Wheat	plastid	42.08	36.5

Protein Annotations

EnsemblPlants:CDY48930	EnsemblPlantsGene:GSBRNA2T00092018001	GO:A0A078IDH0	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:LipoPS_modifying	ncoils:Coil	PANTHER:PTHR12203	PANTHER:PTHR12203:SF28	PFAM:PF05686	ProteinID:CDY48930
ProteinID:CDY48930.1	SEG:seg	SMART:SM00672	TMHMM:TMhelix	UniParc:UPI0004EEEB2C	UniProt:A0A078IDH0
MapMan:35.2	:	:	:	:	:

Description

BnaA09g39070DBnaA09g39070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IDH0]

Coordinates

chrLK032801:-:92874..96115

Molecular Weight (calculated)

62587.3 Da

IEP (calculated)

9.412

GRAVY (calculated)

-0.520

Length

530 amino acids

Sequence
(BLAST)

001: MRENIHVAQA TEDHHHQQQH KIATYLSSKL AKTRVTAKIH IFVFFIFLLS ASLSWIFFTF VLGESRFQVI SVFTRNTNKS ATTITNIPKT IPLNCTLLNN
101: TTTQTCPSNY PTKFEPTISS SETCPDYFRW IQQDLKVWQE TGITRETLER AKPNAHFRVV IKSGRLYVDQ YVKSYQTRDV FTIWGILQLL RTYPGQIPDL
201: ELLFLCYDKP VIWKRDFNKT REDTWPPPPL FRYCGHRDAY DIVFPDWSFW GWPEVNIKEW KKLSVALQEG NKRVKWKDRI PYAYWKGNPH VSTPIRKELM
301: RCNFSDKYDP MLRLYAQDWR IESKKGFKGS NLEDQCTHRY KIYIEGEAWS VSEKYILSCD SMTLLVKPEY HDFFIRSMVP MKHYWPIRQN NKCGDLKFAV
401: EWGNNNTDKA QVIGRQGSDY IMKNLEMKYV YDYMFYVLQG YGKLMKLDVT VPENATEVCS ETMACPITDG RLIRQCMDDS LVMSPSVKAA CNLPKPYGDY
501: ELKRILKKRQ SAERKVMKWT DEYWNLRSGK

Best Arabidopsis Sequence Match ( AT3G61280.1 )
(BLAST)

001: MRENTQVAQF TEDHHQRHQT PITCLSSKLA KIWTLFTTKI FIFVLFIILL SASVSWMYAF VLGENKFQVT SIFTRNTKKS TPTKTTTTTD IPKIAIKIPL
101: NCTSLNSNTT QTCPSNYPTK FEPAISSSET CPDYFKWIHR DLKVWQKTGI TRETLERARP NAHFRIVIKS GRLYVHQYEK AFQTRDVFTI WGILQLLRMY
201: PGQIPDLELL FLCHDRPAIW KRDLKKKRKD TWPPPPLFHY CGHRDAYDIV FPDWSFWGWP ELNIKEWNKL SVALKEGNKK VKWEDRVPYA YWKGNPHVSP
301: IRGDLMRCNF SDKYDPMVRL YVQDWRSEIE AGFRGSNLED QCTHRYKIYI EGNAWSVSEK YILSCDSMTL LVKPEYYDFF FRSMVPMKHF WPIRQNNKCG
401: DLKFAVEWGN NNTEKAQIIG RQGSEYMMKN LKMKYVYDYM LYVLQGYGKL MKLDVTVPEN ATEVCSETMA CSITDGGRIR QCMDDSLVMS PSVKAACDLP
501: PSYGDYELKK FRKKQESAER KVEQWTNKYW NLRDPK

Arabidopsis Description

Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:Q5Q0C1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.