CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plastid, plasma membrane

Predictor Summary:

plastid 3
plasma membrane 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra004942.1-P	Field mustard	mitochondrion, peroxisome, plasma membrane, plastid	96.08	96.08
CDY18897	Canola	golgi, mitochondrion, plastid, vacuole	64.58	80.63
CDY27355	Canola	golgi, mitochondrion, nucleus, plasma membrane, plastid	57.84	69.89
CDY37069	Canola	golgi	57.05	69.6
AT2G45830.1	Thale cress	mitochondrion	56.9	69.41
CDY69828	Canola	mitochondrion	38.56	64.06
CDX71753	Canola	endoplasmic reticulum	47.18	61.3
CDY48932	Canola	endoplasmic reticulum	47.18	61.3
CDY45704	Canola	endoplasmic reticulum, golgi	47.49	60.84
CDY58789	Canola	endoplasmic reticulum, golgi	47.34	60.64
VIT_15s0046g03110.t01	Wine grape	cytosol	35.74	60.64
KRH65106	Soybean	cytosol	16.14	59.54
CDX71752	Canola	cytosol	38.87	57.67
GSMUA_Achr5P12260_001	Banana	mitochondrion	31.97	53.68
VIT_15s0046g03150.t01	Wine grape	golgi	42.95	52.79
CDX89107	Canola	mitochondrion	37.3	51.97
KRH48182	Soybean	cytosol, golgi, plasma membrane	41.22	51.57
KRH65107	Soybean	cytosol	12.23	50.98
Solyc01g094380.2.1	Tomato	cytosol, extracellular, golgi, plastid	40.13	49.9
CDY48930	Canola	plasma membrane	41.07	49.43
CDX71750	Canola	plasma membrane	39.97	49.04
CDX71749	Canola	cytosol, golgi, plasma membrane	31.66	46.54
PGSC0003DMT400055754	Potato	nucleus	10.97	46.05
CDY18896	Canola	golgi, plasma membrane, plastid	28.06	45.43
Os02t0642700-01	Rice	plastid	33.54	45.15
Solyc05g048800.1.1	Tomato	cytosol	16.93	44.44
CDX88050	Canola	plastid	36.52	43.63
CDX80388	Canola	plastid	36.36	43.36
HORVU6Hr1G060750.4	Barley	cytosol, peroxisome	33.54	43.06
TraesCS2B01G093400.1	Wheat	golgi, mitochondrion, plastid	33.7	42.83
CDY08097	Canola	plastid	36.05	42.05
CDY05887	Canola	golgi	35.74	41.68
TraesCS6A01G237500.1	Wheat	cytosol, mitochondrion	30.25	41.15
EES07545	Sorghum	plastid	35.11	40.58
TraesCS6D01G220200.2	Wheat	cytosol, mitochondrion	30.25	40.29
CDY48931	Canola	plasma membrane	20.69	40.24
Zm00001d051287_P001	Maize	plastid	34.64	40.11
Os04t0534100-01	Rice	mitochondrion	27.43	39.95
Zm00001d002836_P006	Maize	plastid	33.86	39.93
TraesCS2D01G365600.1	Wheat	plastid	34.64	39.82
TraesCS2B01G386200.1	Wheat	plastid	34.48	39.78
TraesCS2A01G368900.2	Wheat	plastid	34.01	39.1
CDY25494	Canola	mitochondrion	35.27	38.86
EES11181	Sorghum	plastid	33.54	38.56
TraesCSU01G025200.1	Wheat	plastid	33.86	38.37
CDY59071	Canola	endoplasmic reticulum, golgi, vacuole	29.0	36.42
TraesCS6B01G266000.1	Wheat	plastid	34.8	36.33
CDY09932	Canola	endoplasmic reticulum, golgi	28.68	36.31
CDY10259	Canola	mitochondrion	28.53	36.18
CDY06688	Canola	mitochondrion	28.53	36.11
CDY42493	Canola	cytosol	36.68	27.05

Protein Annotations

EnsemblPlants:CDX74769	EnsemblPlantsGene:GSBRNA2T00116739001	GO:A0A078CF45	InterPro:LipoPS_modifying	ncoils:Coil	PANTHER:PTHR12203
PANTHER:PTHR12203:SF28	PFAM:PF05686	ProteinID:CDX74769	ProteinID:CDX74769.1	SEG:seg	SMART:SM00672
TMHMM:TMhelix	UniParc:UPI0004EF03F1	MapMan:35.2	:	:	:

Description

BnaA05g05150D

Coordinates

chrLK031802:+:536937..539728

Molecular Weight (calculated)

74611.8 Da

IEP (calculated)

8.776

GRAVY (calculated)

-0.687

Length

638 amino acids

Sequence
(BLAST)

001: MAQRKSTKGN NRDTQTNTHS NHASIKTSSH QGKRIAKATL LLVFSIFVSA GLLSFSGCFD YTTLTGLRQV TTTITKPPII TLHRFPRQCG VVQNQTQPVS
101: EDGTNKNKPR SNHSRPSTCP SYFRWIYEDL RPWRETGVTR EILQKASRKA HFRVIILDGK VYAKKYRRAI ETRDTFTLWG IVQLLQWYPG RLPDLELLFD
201: ADDRPTVRSS DYRGQQHPAP PPVFRYCSND ASLDIVFPDW SFWGWTELNI KPWAKSLVAI EEGNKMTQWE DRVPYAYWRG NPNVARTRKD LLRCNVSDQE
301: DWNTGLYIND WATEFKEGFK NSNLENQCTH RYKIYIEGWA WSVSEKYIMA CDSMTLYVRP TYYDFLIRGM VPLQHYWPIR DHGKCRSLKH AVHWGNTHLD
401: QARKIGEEGS RYIREEVNME YVYDYMFHLM NEYAKLLKFK PEIPLGAKEI TSDSMGCPAK GRWRDFLAES MVMSPSEVSP CEMPLPYSSL ELKEVLERKA
501: NLTRQVELWE DQYYQAKTIG RNGSGYVLKY LQMKYVYDYM FHILQSYGKL MKMNVEVPEG AKEVCPETMA CPVKGGRMRQ YMDDSLILSP SNKGSCETPP
601: PFEDDELKKF LEKKKSVEKE VEKWTNEYWE EQNKSLQH

Best Arabidopsis Sequence Match ( AT2G45830.1 )
(BLAST)

001: MLQRKSMKRN NNNLLTNKNK YVYLKTASHP AKSIAKATLF LVTSLFISAG LLDLLGCFDF TTFTGLKQVT TSIRKSPITS QRFPNQCGVV QNQTQLFPQN
101: GSSRNNDKPR SSHSRISTCP SYFRWIHEDL RPWKETGVTR GMLEKARRTA HFRVVILDGR VYVKKYRKSI QTRDVFTLWG IVQLLRWYPG RLPDLELMFD
201: PDDRPTVRSK DFQGQQHPAP PPLFRYCSDD ASLDIVFPDW SFWGWAEVNI KPWDKSLVAI EEGNKMTQWK DRVAYAYWRG NPNVAPTRRD LLRCNVSAQE
301: DWNTRLYIQD WDRESREGFK NSNLENQCTH RYKIYIEGWA WSVSEKYIMA CDSMTLYVRP MFYDFYVRGM MPLQHYWPIR DTSKCTSLKF AVHWGNTHLD
401: QASKIGEEGS RFIREEVKME YVYDYMFHLM NEYAKLLKFK PEIPWGATEI TPDIMGCSAT GRWRDFMEES MVMFPSEESP CEMPSPFNPH DLKEILERKT
501: NLTRQVEWWE DQYFHDLANI KKP

Arabidopsis Description

DTA2Downstream target of AGL15 2 [Source:UniProtKB/TrEMBL;Acc:F4IH50]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.