CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

plastid 2
mitochondrion 1
endoplasmic reticulum 3
extracellular 2
vacuole 2
plasma membrane 2
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY58789	Canola	endoplasmic reticulum, golgi	96.39	96.39
CDY69828	Canola	mitochondrion	66.87	86.72
CDY48932	Canola	endoplasmic reticulum	82.73	83.91
CDX71753	Canola	endoplasmic reticulum	82.73	83.91
AT3G61270.1	Thale cress	cytosol, golgi, plasma membrane	82.13	82.13
CDY37069	Canola	golgi	71.08	67.69
CDY27355	Canola	golgi, mitochondrion, nucleus, plasma membrane, plastid	70.88	66.86
CDY18897	Canola	golgi, mitochondrion, plastid, vacuole	68.47	66.73
KRH65106	Soybean	cytosol	22.29	64.16
VIT_15s0046g03110.t01	Wine grape	cytosol	47.79	63.3
GSMUA_Achr5P12260_001	Banana	mitochondrion	44.98	58.95
VIT_15s0046g03150.t01	Wine grape	golgi	57.83	55.49
KRH65107	Soybean	cytosol	16.47	53.59
KRH48182	Soybean	cytosol, golgi, plasma membrane	54.22	52.94
CDX71752	Canola	cytosol	45.18	52.33
PGSC0003DMT400055754	Potato	nucleus	15.66	51.32
Solyc01g094380.2.1	Tomato	cytosol, extracellular, golgi, plastid	52.41	50.88
Os02t0642700-01	Rice	plastid	47.79	50.21
CDX89107	Canola	mitochondrion	43.98	47.82
HORVU6Hr1G060750.4	Barley	cytosol, peroxisome	47.59	47.69
CDX74769	Canola	mitochondrion, peroxisome, plasma membrane, plastid	60.84	47.49
TraesCS2B01G093400.1	Wheat	golgi, mitochondrion, plastid	47.19	46.81
CDX71749	Canola	cytosol, golgi, plasma membrane	40.76	46.77
CDX88050	Canola	plastid	49.4	46.07
TraesCS6A01G237500.1	Wheat	cytosol, mitochondrion	42.97	45.63
CDX80388	Canola	plastid	48.8	45.42
CDY48930	Canola	plasma membrane	47.99	45.09
Solyc05g048800.1.1	Tomato	cytosol	21.89	44.86
TraesCS6D01G220200.2	Wheat	cytosol, mitochondrion	42.97	44.68
Zm00001d002836_P006	Maize	plastid	48.39	44.55
CDX71750	Canola	plasma membrane	46.39	44.42
EES11181	Sorghum	plastid	48.8	43.78
Zm00001d051287_P001	Maize	plastid	48.39	43.74
EES07545	Sorghum	plastid	48.39	43.66
TraesCS2D01G365600.1	Wheat	plastid	48.59	43.6
TraesCS2B01G386200.1	Wheat	plastid	47.79	43.04
CDY08097	Canola	plastid	46.99	42.78
TraesCS2A01G368900.2	Wheat	plastid	47.59	42.7
CDY05887	Canola	golgi	46.79	42.6
Os04t0534100-01	Rice	mitochondrion	37.35	42.47
TraesCSU01G025200.1	Wheat	plastid	47.79	42.27
CDY25494	Canola	mitochondrion	47.59	40.93
CDY18896	Canola	golgi, plasma membrane, plastid	32.33	40.86
CDY48931	Canola	plasma membrane	25.9	39.33
TraesCS6B01G266000.1	Wheat	plastid	47.99	39.12
CDY06688	Canola	mitochondrion	39.16	38.69
CDY09932	Canola	endoplasmic reticulum, golgi	39.16	38.69
CDY10259	Canola	mitochondrion	38.96	38.57
CDY59071	Canola	endoplasmic reticulum, golgi, vacuole	38.96	38.19
CDY42493	Canola	cytosol	42.97	24.74

Protein Annotations

EnsemblPlants:CDY45704	EnsemblPlantsGene:GSBRNA2T00082503001	GO:A0A078I8G8	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:LipoPS_modifying	ncoils:Coil	PANTHER:PTHR12203	PANTHER:PTHR12203:SF28	PFAM:PF05686	ProteinID:CDY45704
ProteinID:CDY45704.1	SMART:SM00672	TMHMM:TMhelix	UniParc:UPI0004EDBF4B	UniProt:A0A078I8G8	MapMan:35.2

Description

BnaCnng13690DBnaCnng13690D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I8G8]

Coordinates

chrLK032633:+:207646..209666

Molecular Weight (calculated)

58861.9 Da

IEP (calculated)

7.909

GRAVY (calculated)

-0.621

Length

498 amino acids

Sequence
(BLAST)

001: MKTNNNDEQR KTLPFPGKYI LKSTVFIVAS LFISAALLGF LGYLNFNAFA GFKLIPKRFK PRFPYQCDVQ DQTHQIPFSQ NITSRLHPNR SQPSSCPSYF
101: RWIHEDLRPW KATGITRDMV EKASKTAHFR LVIHRGKAYV KRYRKSIQTR DDFTLWGILQ LLRWYPGKLP DLDLMFDADD RPVVRSDDYT GQQNKDPPPL
201: FRYCSDDASL DIVFPDWSFW GWAEVNIKPW GKSLEAIQEG NNITQWKDRV AYAYWRGNPY VDPTRGELLK CNVSENEEWN TRLYVQDWDK ETKEGFKNSN
301: LENQCTHRYK IYIEGWAWSV SEKYIMACDS MTLYVKPRFY DFYIRGMMPL QHYWPIRDDA KCTSLKFAVH WGNTHVDKAR EIGELGSRFI REEVNMKYVY
401: DYMFHLLNEY AKLLKCKVNV PSDAEEITPE SLGCAATERW RDFMAESMVM SPSEEFPCDM VPPYDRLALK EVTERKANLT RQVELWEDQY FHDLANKP

Best Arabidopsis Sequence Match ( AT3G61270.1 )
(BLAST)

001: MKMNNNDGQH NKTVTFPRKS IVKATVFIVV LFISAAILDL LGYLDFNAFA GLKLTTKTKE PNPYGCDFVQ NQSSQTPISQ NRKSRLNPNN SSKSSTCPSY
101: FRWIHEDLRP WKQTGITRGM IEEASRTAHF RLVIRNGKAY VKRYKKSIQT RDEFTLWGIL QLLRWYPGKL PDLELMFDAD DRPVVRSVDF IGQQKEPPPV
201: FRYCSDDASL DIVFPDWSFW GWAEVNVKPW GKSLEAIKEG NSMTQWKDRV AYAYWRGNPY VDPGRGDLLK CNATEHEEWN TRLYIQDWDK ETKEGFKNSN
301: LENQCTHRYK IYIEGWAWSV SEKYIMACDS MTLYVKPRFY DFYIRGMMPL QHYWPIRDDS KCTSLKFAVH WGNTHEDKAR EIGEVGSRFI REEVNMQYVY
401: DYMFHLLKEY ATLLKFKPEI PLDAEEITPD SMGCPATERW RDFKAESMII SPSEESPCEM LPPYDPLALK EVLERKANLT RQVELWENQY FQNLTNKP

Arabidopsis Description

Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:Q9M2D7]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.