CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
endoplasmic reticulum 1
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra009709.1-P	Field mustard	plastid	98.69	98.69
CDX80388	Canola	plastid	98.5	98.32
AT5G23850.1	Thale cress	endoplasmic reticulum, mitochondrion, peroxisome, plastid	87.64	86.35
CDY05887	Canola	golgi	74.91	73.13
CDY08097	Canola	plastid	74.34	72.58
VIT_16s0050g00190.t01	Wine grape	nucleus	35.39	67.5
GSMUA_Achr5P12260_001	Banana	mitochondrion	46.44	65.26
KRH08971	Soybean	cytosol	28.84	64.44
VIT_16s0050g00160.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	58.61	62.73
KRH09038	Soybean	cytosol	31.09	61.48
KRH09011	Soybean	cytosol	60.49	60.49
KRH08981	Soybean	plastid	42.7	60.0
KRH09010	Soybean	cytosol, peroxisome, plasma membrane	58.05	59.05
KRH08960	Soybean	plastid	22.66	57.89
Os02t0642700-01	Rice	plastid	50.75	57.17
KRH09051	Soybean	cytosol, nucleus, plasma membrane	28.65	56.67
PGSC0003DMT400037089	Potato	endoplasmic reticulum, golgi, vacuole	54.12	56.23
Solyc03g025760.2.1	Tomato	endoplasmic reticulum, golgi	53.93	56.03
KRH38478	Soybean	cytosol	60.67	55.2
CDY69828	Canola	mitochondrion	39.14	54.43
Solyc03g025770.2.1	Tomato	endoplasmic reticulum, golgi, vacuole	50.19	53.82
HORVU6Hr1G060750.4	Barley	cytosol, peroxisome	49.81	53.52
KRH08953	Soybean	cytosol, extracellular, nucleus	14.42	53.1
TraesCS2B01G093400.1	Wheat	golgi, mitochondrion, plastid	49.81	52.99
CDX71752	Canola	cytosol	41.95	52.09
KRG88606	Soybean	cytosol	20.79	51.63
TraesCS6A01G237500.1	Wheat	cytosol, mitochondrion	44.57	50.75
Zm00001d051287_P001	Maize	plastid	52.06	50.45
EES07545	Sorghum	plastid	51.87	50.18
CDY58789	Canola	endoplasmic reticulum, golgi	46.63	50.0
Zm00001d002836_P006	Maize	plastid	50.56	49.91
CDX71753	Canola	endoplasmic reticulum	45.88	49.9
TraesCS6D01G220200.2	Wheat	cytosol, mitochondrion	44.76	49.9
CDY48932	Canola	endoplasmic reticulum	45.69	49.69
EES11181	Sorghum	plastid	51.5	49.55
CDY45704	Canola	endoplasmic reticulum, golgi	46.07	49.4
CDX89107	Canola	mitochondrion	41.76	48.69
KRG88612	Soybean	cytosol	25.47	48.57
TraesCSU01G025200.1	Wheat	plastid	51.12	48.49
Os04t0534100-01	Rice	mitochondrion	39.7	48.4
TraesCS2D01G365600.1	Wheat	plastid	49.81	47.93
CDY18897	Canola	golgi, mitochondrion, plastid, vacuole	45.69	47.75
TraesCS2B01G386200.1	Wheat	plastid	49.44	47.74
TraesCS2A01G368900.2	Wheat	plastid	49.44	47.57
CDY37069	Canola	golgi	46.44	47.42
CDY27355	Canola	golgi, mitochondrion, nucleus, plasma membrane, plastid	46.44	46.97
CDX71750	Canola	plasma membrane	44.01	45.19
TraesCS6B01G266000.1	Wheat	plastid	51.69	45.17
CDY48930	Canola	plasma membrane	44.57	44.91
CDY18896	Canola	golgi, plasma membrane, plastid	32.4	43.91
CDX71749	Canola	cytosol, golgi, plasma membrane	35.58	43.78
CDY25494	Canola	mitochondrion	45.88	42.31
CDY48931	Canola	plasma membrane	24.91	40.55
CDY09932	Canola	endoplasmic reticulum, golgi	37.83	40.08
CDY59071	Canola	endoplasmic reticulum, golgi, vacuole	38.02	39.96
CDY10259	Canola	mitochondrion	37.64	39.96
CDY06688	Canola	mitochondrion	37.27	39.48
KRG88496	Soybean	cytosol	12.17	37.14
CDX74769	Canola	mitochondrion, peroxisome, plasma membrane, plastid	43.63	36.52
KRH09043	Soybean	cytosol, golgi, mitochondrion, plastid	12.36	36.26
CDY42493	Canola	cytosol	41.2	25.43

Protein Annotations

EnsemblPlants:CDX88050	EnsemblPlantsGene:GSBRNA2T00147463001	GO:A0A078DFS6	InterPro:LipoPS_modifying	PANTHER:PTHR12203	PANTHER:PTHR12203:SF59
PFAM:PF05686	ProteinID:CDX88050	ProteinID:CDX88050.1	SEG:seg	SMART:SM00672	TMHMM:TMhelix
UniParc:UPI0004EDBC43	MapMan:35.2	:	:	:	:

Description

BnaA06g26410D

Coordinates

chrLK031854:+:301072..303828

Molecular Weight (calculated)

61677.1 Da

IEP (calculated)

8.272

GRAVY (calculated)

-0.562

Length

534 amino acids

Sequence
(BLAST)

001: MRNSPSKNEP GGGHSRNFTN WSPFVKSSGF GISPNRSYAL LSLLTLLIVG AFISTRILLD PTVLLEKEAV TTKTRSHTIF PKYPPPTPVT TQSPKPEFTL
101: HCSANDTNAT CPRNNYPATA SFGEDAPTAT CPDYFRWIHE DLRPWAKTGI TREALERAKK TANFRLAIVG GRVYVEKFQD AFQTRDVFTI WGFLQLLRKY
201: PGKIPDLELM FDCVDWPVVR ALDFAGVDAP SPPPLFRYCG NEETLDIVFP DWSFWGWSEV NIKPWESLLK ELREGNQRTT WINREPYAYW KGNPSVAETR
301: QDLMKCNVSE EHEWNARVYA QDWIRESKEG YKQSDLASQC HHRYKIYIEG SAWSVSEKYI LACDSVTLLV KPHYYDFFTR GLLPAHHYWP VREHDKCRSI
401: KFAVHWGNSH IQKAQDIGKT ASEFIQQELK MDYVYDYMYH LLTGYAKLLQ FKPEIPQNAM EICSETMACP RSGNERKFMT ESLVKHPAET GPCAMPTPYD
501: PASFYAVEKR KQSTTKRILQ WEMKYWNKQN QTGS

Best Arabidopsis Sequence Match ( AT5G23850.1 )
(BLAST)

001: MRNSPSKNGS AGGHSRTYTD TIWSPFVKSG LGISPNRSYA LVSLLILLIV GAFISTRLLL DTTVLLEKKA ATTTTTKTQT QTITPKYPRP TTVITQSPKP
101: EFTLHCSANE TTASCPSNKY PTTTSFEDDD TNHPPTATCP DYFRWIHEDL RPWSRTGITR EALERAKKTA TFRLAIVGGK IYVEKFQDAF QTRDVFTIWG
201: FLQLLRKYPG KIPDLELMFD CVDWPVVRAT EFAGANAPSP PPLFRYCGNE ETLDIVFPDW SFWGWAEVNI KPWESLLKEL REGNERTKWI NREPYAYWKG
301: NPMVAETRQD LMKCNVSEEH EWNARLYAQD WIKESKEGYK QSDLASQCHH RYKIYIEGSA WSVSEKYILA CDSVTLLVKP HYYDFFTRGL LPAHHYWPVR
401: EHDKCRSIKF AVDWGNSHIQ KAQDIGKAAS DFIQQDLKMD YVYDYMYHLL TEYSKLLQFK PEIPRNAVEI CSETMACLRS GNERKFMTES LVKQPADSGP
501: CAMPPPYDPA TYYEVVKRKQ STNMRILQWE MKYWSKQNQT GS

Arabidopsis Description

At5g23850 [Source:UniProtKB/TrEMBL;Acc:Q9FF95]
SUBAcon: [plastid,endoplasmic reticulum,peroxisome,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.