Factsheet for Solyc03g025760.2.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 6
plastid 3
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol, nucleus, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400037089	Potato	endoplasmic reticulum, golgi, vacuole	95.14	95.14
VIT_16s0050g00190.t01	Wine grape	nucleus	39.88	73.21
Solyc03g025770.2.1	Tomato	endoplasmic reticulum, golgi, vacuole	69.26	71.49
VIT_16s0050g00160.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	65.76	67.74
GSMUA_Achr5P12260_001	Banana	mitochondrion	49.81	67.37
KRH08971	Soybean	cytosol	28.99	62.34
KRH09038	Soybean	cytosol	30.74	58.52
Solyc03g025780.2.1	Tomato	golgi	57.2	57.99
KRH08981	Soybean	plastid	42.8	57.89
KRH09011	Soybean	cytosol	58.37	56.18
KRH09051	Soybean	cytosol, nucleus, plasma membrane	29.18	55.56
Os02t0642700-01	Rice	plastid	51.17	55.49
Solyc01g094390.2.1	Tomato	endoplasmic reticulum, golgi, vacuole	50.78	55.3
KRH09010	Soybean	cytosol, peroxisome, plasma membrane	56.03	54.86
AT5G23850.1	Thale cress	endoplasmic reticulum, mitochondrion, peroxisome, plastid	57.2	54.24
KRH08960	Soybean	plastid	21.98	54.07
CDX88050	Canola	plastid	56.03	53.93
Bra009709.1-P	Field mustard	plastid	55.84	53.75
HORVU6Hr1G060750.4	Barley	cytosol, peroxisome	51.95	53.72
CDX80388	Canola	plastid	55.45	53.27
AT3G48980.2	Thale cress	plastid	56.03	52.84
KRH08953	Soybean	cytosol, extracellular, nucleus	14.79	52.41
KRH38478	Soybean	cytosol	59.53	52.13
Bra018021.1-P	Field mustard	golgi	54.47	51.85
TraesCS6A01G237500.1	Wheat	cytosol, mitochondrion	47.28	51.81
TraesCS2B01G093400.1	Wheat	golgi, mitochondrion, plastid	50.39	51.59
CDY08097	Canola	plastid	54.86	51.55
CDY05887	Canola	golgi	54.47	51.19
TraesCS6D01G220200.2	Wheat	cytosol, mitochondrion	47.47	50.94
Zm00001d002836_P006	Maize	plastid	53.11	50.46
KRG88606	Soybean	cytosol	21.01	50.23
EES11181	Sorghum	plastid	53.5	49.55
TraesCS2D01G365600.1	Wheat	plastid	53.31	49.37
Zm00001d051287_P001	Maize	plastid	52.72	49.18
EES07545	Sorghum	plastid	52.72	49.09
TraesCS2A01G368900.2	Wheat	plastid	52.92	49.01
TraesCS2B01G386200.1	Wheat	plastid	52.72	49.01
KRG88612	Soybean	cytosol	25.88	47.5
TraesCSU01G025200.1	Wheat	plastid	51.95	47.42
Solyc05g048800.1.1	Tomato	cytosol	22.18	46.91
Solyc01g094380.2.1	Tomato	cytosol, extracellular, golgi, plastid	46.69	46.78
Os04t0534100-01	Rice	mitochondrion	39.11	45.89
TraesCS6B01G266000.1	Wheat	plastid	52.92	44.52
Solyc06g076980.2.1	Tomato	unclear	38.52	42.76
KRG88496	Soybean	cytosol	13.42	39.43
KRH09043	Soybean	cytosol, golgi, mitochondrion, plastid	13.23	37.36

Protein Annotations

MapMan:35.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006629
GO:GO:0006664	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0012505	GO:GO:0016740
GO:GO:0046527	UniProt:K4BF49	InterPro:LipoPS_modifying	PFAM:PF05686	PANTHER:PTHR12203	PANTHER:PTHR12203:SF59
SMART:SM00672	EnsemblPlantsGene:Solyc03g025760.2	EnsemblPlants:Solyc03g025760.2.1	TMHMM:TMhelix	UniParc:UPI0002768E8F	SEG:seg

Description

No Description!

Coordinates

chr3:-:3150547..3154927

Molecular Weight (calculated)

60020.6 Da

IEP (calculated)

9.020

GRAVY (calculated)

-0.579

Length

514 amino acids

Sequence
(BLAST)

001: MATKTTSSLT LFVSLLLFIG AIFSTHFLYS PFNNSTTGYS PRKTIVTRVI RYNHTYATPS VSKQPLKKLE IQLNCTLGNL TRTCPASYYP LKFTEQNESS
101: TSSSPPPTCP DYFRWIYDDL WHWRETGITK EMVMRAKRTA DFRLVIVNGR AYVETYHKAF QSRDTFTLWG ILQMLRRYPG KVPDLDLMFD CVDWPVLKTE
201: FYRHPKAPVP PPLFRYCGND SSLDIVFPDW SFWGWPEINI KPWETLSKDL KKGNEKMKWT EREPYAYWKG NPVVAETRRD LLKCNASEKQ DWNARVYAQD
301: WAQAEKQGYK QSDLANQCIH RYKIYVEGSA WSVSEKYILA CDSVTLLIKP QYYDFYTRGL MPLQHYWPVK DKDKCRSIKH AVDWGNTHEQ EAQAIGKAAS
401: DFIQEQLKMD YVYDYMFHLL SEYAKLLKYK PTVPRKAVEL CSEAMACSAE GLTKKFMLES MVEGPSDATP CNMPPPYGPA GLHSILDRKE NSIKQVDSWE
501: QQYWKNKSKQ QRRF

Best Arabidopsis Sequence Match ( AT5G23850.1 )
(BLAST)

001: MRNSPSKNGS AGGHSRTYTD TIWSPFVKSG LGISPNRSYA LVSLLILLIV GAFISTRLLL DTTVLLEKKA ATTTTTKTQT QTITPKYPRP TTVITQSPKP
101: EFTLHCSANE TTASCPSNKY PTTTSFEDDD TNHPPTATCP DYFRWIHEDL RPWSRTGITR EALERAKKTA TFRLAIVGGK IYVEKFQDAF QTRDVFTIWG
201: FLQLLRKYPG KIPDLELMFD CVDWPVVRAT EFAGANAPSP PPLFRYCGNE ETLDIVFPDW SFWGWAEVNI KPWESLLKEL REGNERTKWI NREPYAYWKG
301: NPMVAETRQD LMKCNVSEEH EWNARLYAQD WIKESKEGYK QSDLASQCHH RYKIYIEGSA WSVSEKYILA CDSVTLLVKP HYYDFFTRGL LPAHHYWPVR
401: EHDKCRSIKF AVDWGNSHIQ KAQDIGKAAS DFIQQDLKMD YVYDYMYHLL TEYSKLLQFK PEIPRNAVEI CSETMACLRS GNERKFMTES LVKQPADSGP
501: CAMPPPYDPA TYYEVVKRKQ STNMRILQWE MKYWSKQNQT GS

Arabidopsis Description

At5g23850 [Source:UniProtKB/TrEMBL;Acc:Q9FF95]
SUBAcon: [mitochondrion,endoplasmic reticulum,plastid,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.