Factsheet for Bra018021.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 1
plastid 3
golgi 2
mitochondrion 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY08097	Canola	plastid	99.63	98.35
AT3G48980.2	Thale cress	plastid	85.56	84.77
Bra009709.1-P	Field mustard	plastid	73.7	74.53
VIT_16s0050g00190.t01	Wine grape	nucleus	34.63	66.79
GSMUA_Achr5P12260_001	Banana	mitochondrion	45.19	64.21
KRH08971	Soybean	cytosol	28.15	63.6
VIT_16s0050g00160.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	57.78	62.53
KRH09038	Soybean	cytosol	30.37	60.74
KRH08981	Soybean	plastid	42.22	60.0
KRH09011	Soybean	cytosol	58.7	59.36
KRH09010	Soybean	cytosol, peroxisome, plasma membrane	56.48	58.1
KRH09051	Soybean	cytosol, nucleus, plasma membrane	28.52	57.04
KRH08960	Soybean	plastid	22.04	56.94
Os02t0642700-01	Rice	plastid	49.44	56.33
PGSC0003DMT400037089	Potato	endoplasmic reticulum, golgi, vacuole	52.04	54.67
Solyc03g025770.2.1	Tomato	endoplasmic reticulum, golgi, vacuole	50.37	54.62
Solyc03g025760.2.1	Tomato	endoplasmic reticulum, golgi	51.85	54.47
KRH38478	Soybean	cytosol	58.89	54.17
Bra007592.1-P	Field mustard	cytosol	32.78	52.84
HORVU6Hr1G060750.4	Barley	cytosol, peroxisome	48.52	52.72
Bra007591.1-P	Field mustard	cytosol	41.48	52.09
KRH08953	Soybean	cytosol, extracellular, nucleus	13.89	51.72
TraesCS2B01G093400.1	Wheat	golgi, mitochondrion, plastid	47.96	51.59
KRG88606	Soybean	cytosol	20.37	51.16
Zm00001d051287_P001	Maize	plastid	51.48	50.45
EES07545	Sorghum	plastid	50.93	49.82
TraesCS6A01G237500.1	Wheat	cytosol, mitochondrion	42.96	49.47
Zm00001d002836_P006	Maize	plastid	49.07	48.98
TraesCS6D01G220200.2	Wheat	cytosol, mitochondrion	43.33	48.85
KRG88612	Soybean	cytosol	25.19	48.57
EES11181	Sorghum	plastid	49.81	48.47
Bra007590.1-P	Field mustard	cytosol	43.89	48.27
Bra003444.1-P	Field mustard	endoplasmic reticulum, golgi	44.07	47.79
TraesCS2D01G365600.1	Wheat	plastid	48.89	47.57
Os04t0534100-01	Rice	mitochondrion	38.52	47.49
TraesCSU01G025200.1	Wheat	plastid	49.26	47.25
TraesCS2A01G368900.2	Wheat	plastid	48.52	47.21
TraesCS2B01G386200.1	Wheat	plastid	48.33	47.2
Bra007593.1-P	Field mustard	endoplasmic reticulum, nucleus, plasma membrane	44.44	45.28
TraesCS6B01G266000.1	Wheat	plastid	50.19	44.35
Bra027639.1-P	Field mustard	mitochondrion	44.81	41.87
Bra039310.1-P	Field mustard	golgi, mitochondrion	33.33	41.67
Bra015563.1-P	Field mustard	mitochondrion	37.04	39.68
Bra031558.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion	36.85	39.41
KRG88496	Soybean	cytosol	12.41	38.29
Bra004942.1-P	Field mustard	mitochondrion, peroxisome, plasma membrane, plastid	43.15	36.52
KRH09043	Soybean	cytosol, golgi, mitochondrion, plastid	12.04	35.71

Protein Annotations

EnsemblPlants:Bra018021.1	EnsemblPlants:Bra018021.1-P	EnsemblPlantsGene:Bra018021	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:LipoPS_modifying	PANTHER:PTHR12203	PANTHER:PTHR12203:SF59	PFAM:PF05686	SEG:seg	SMART:SM00672
TMHMM:TMhelix	UniParc:UPI000253F23A	UniProt:M4DND4	MapMan:35.2	:	:

Description

AT3G48980 (E=1e-272) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Lipopolysaccharide-modifying protein (InterPro:IPR006598), Protein of unknown function DUF821, CAP10-like (InterPro:IPR008539); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23850.1); Has 462 Blast hits to 458 proteins in 90 species: Archae - 0; Bacteria - 36; Metazoa - 203; Fungi - 74; Plants - 116; Viruses - 2; Other Eukaryotes - 31 (source: NCBI BLink).

Coordinates

chrA06:-:9554400..9556933

Molecular Weight (calculated)

62641.4 Da

IEP (calculated)

8.586

GRAVY (calculated)

-0.592

Length

540 amino acids

Sequence
(BLAST)

001: MRNSPSYGSS GGHSRHFDTI LSPLVKTGAG ASNRSYAFFS FFLFLLLGVF LTTRLLLDPS VLIAKETALV TETLKAGESP KYPQSTKLIT EKPKEFKLNC
101: PAFSDNATVT CPRDNYPTSL LPGSRKDDSG RSPPATCPDY FRWIHEDLRP WEKTGITREA LERANATANF RLAIIDGRIY VEKLREAFQT RDVFTIWGFV
201: QLLRRYPGKI PDLELMFDCV DWPVVKAAAF GGFEQLTPPP LFRYCGNNET LDIVFPDWSY WGWAEVNIKP WESLLKELKE GNQRSKWVDR EPYAYWKGNP
301: TVADTRLDLM KCNVSEGHDW KARLYQQDWA RESKEGYKQS DLASQCHHRY KIYIEGSAWS VSEKYILACD SVTLLVNPHY YDFFTRGMLP GQHYWPVKED
401: DKCRSIKFAV DWGNQHKLKA QDIGKKASEF VQQELKMDYV YDYMYHLLTQ YSKLLRFKPE IPKNSTELCS ETMACPRDGN ERKFMMESLV THPAETGPCT
501: MPPPYDPASF FSVLKRRQST ARRIEQWESK YWRKHNQTRS

Best Arabidopsis Sequence Match ( AT3G48980.2 )
(BLAST)

001: MQQQGEMMRN SPSYTSATHS RNFDTILSPL VKTGTGASNR SYAFFSIFLF LLLGAFLSTR LLLDPSVLIE KEAVSVTERE TTQSPEYPQS TKLITEKPKE
101: FTLNCAAFSG NDTGTCPKDN YPTSFRSSAG EGESDRSPSA TCPDYFRWIH EDLRPWEKTG ITREALERAN ATAIFRLAII NGRIYVEKFR EAFQTRDVFT
201: IWGFVQLLRR YPGKIPDLEL MFDCVDWPVV KAAEFAGVDQ PPPPPLFRYC ANDETLDIVF PDWSYWGWAE VNIKPWESLL KELREGNQRT KWIDREPYAY
301: WKGNPTVAET RLDLMKCNLS EVYDWKARLY KQDWVKESKE GYKQSDLASQ CHHRYKIYIE GSAWSVSEKY ILACDSVTLM VKPHYYDFFT RGMFPGHHYW
401: PVKEDDKCRS IKFAVDWGNL HMRKAQDIGK KASEFVQQEL KMDYVYDYMF HLLIQYSKLL RFKPEIPQNS TELCSEAMAC PRDGNERKFM MESLVKRPAE
501: TGPCAMPPPY DPASFYSVLK RRQSTTSRIE QWESKYWRKQ NKTGS

Arabidopsis Description

O-glucosyltransferase rumi-like protein (DUF821) [Source:UniProtKB/TrEMBL;Acc:A0A178VAW3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.