Factsheet for Bra007592.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007591.1-P	Field mustard	cytosol	82.69	64.42
CDX71750	Canola	plasma membrane	98.21	63.27
VIT_15s0046g03100.t01	Wine grape	mitochondrion	22.99	60.16
Bra007593.1-P	Field mustard	endoplasmic reticulum, nucleus, plasma membrane	88.06	55.66
AT3G61280.1	Thale cress	plasma membrane	88.66	55.41
VIT_15s0046g03130.t01	Wine grape	cytosol	29.85	45.05
GSMUA_Achr5P12260_001	Banana	mitochondrion	49.85	43.95
VIT_15s0046g03140.t01	Wine grape	cytosol	28.36	40.77
KRH40487	Soybean	cytosol	40.3	38.9
CDY48931	Canola	plasma membrane	37.31	38.11
Bra007590.1-P	Field mustard	cytosol	51.64	35.23
Os02t0642700-01	Rice	plastid	49.55	35.02
KRH65090	Soybean	extracellular	49.55	34.87
TraesCS6A01G237500.1	Wheat	cytosol, mitochondrion	48.06	34.33
TraesCS6D01G220200.2	Wheat	cytosol, mitochondrion	48.66	34.03
Bra003444.1-P	Field mustard	endoplasmic reticulum, golgi	50.45	33.94
KRH48168	Soybean	plasma membrane	50.15	33.8
KRH65092	Soybean	endoplasmic reticulum, plasma membrane, vacuole	49.55	33.2
KRH00707	Soybean	cytosol	35.82	32.79
Bra018021.1-P	Field mustard	golgi	52.84	32.78
Bra009709.1-P	Field mustard	plastid	51.64	32.4
HORVU6Hr1G060750.4	Barley	cytosol, peroxisome	47.76	32.19
TraesCS2B01G093400.1	Wheat	golgi, mitochondrion, plastid	47.46	31.67
Bra004942.1-P	Field mustard	mitochondrion, peroxisome, plasma membrane, plastid	59.1	31.03
Zm00001d002836_P006	Maize	plastid	49.55	30.68
Zm00001d051287_P001	Maize	plastid	50.15	30.49
EES07545	Sorghum	plastid	50.15	30.43
EES11181	Sorghum	plastid	48.96	29.55
TraesCS2B01G386200.1	Wheat	plastid	48.66	29.48
TraesCS2D01G365600.1	Wheat	plastid	48.36	29.19
TraesCS2A01G368900.2	Wheat	plastid	47.76	28.83
Os04t0534100-01	Rice	mitochondrion	37.61	28.77
Bra027639.1-P	Field mustard	mitochondrion	49.55	28.72
TraesCSU01G025200.1	Wheat	plastid	47.46	28.24
Bra031558.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion	41.19	27.33
Bra015563.1-P	Field mustard	mitochondrion	40.9	27.18
TraesCS6B01G266000.1	Wheat	plastid	47.76	26.19
Bra039310.1-P	Field mustard	golgi, mitochondrion	32.24	25.0

Protein Annotations

EnsemblPlants:Bra007592.1	EnsemblPlants:Bra007592.1-P	EnsemblPlantsGene:Bra007592	InterPro:LipoPS_modifying	PANTHER:PTHR12203	PANTHER:PTHR12203:SF28
PFAM:PF05686	SMART:SM00672	UniParc:UPI000254294D	UniProt:M4CTP8	MapMan:35.2	:

Description

AT3G61280 (E=2e-189) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Lipopolysaccharide-modifying protein (InterPro:IPR006598), Protein of unknown function DUF821, CAP10-like (InterPro:IPR008539); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G61290.1); Has 467 Blast hits to 463 proteins in 98 species: Archae - 0; Bacteria - 38; Metazoa - 201; Fungi - 82; Plants - 115; Viruses - 4; Other Eukaryotes - 27 (source: NCBI BLink).

Coordinates

chrA09:+:29927228..29928760

Molecular Weight (calculated)

39784.8 Da

IEP (calculated)

8.734

GRAVY (calculated)

-0.660

Length

335 amino acids

Sequence
(BLAST)

001: MYPGQIPDLE LLFLCHDKPA IWKRDFKKDT WPPPPLFHYC GHRDAYDIVF PDWSFWGWPE LNIKEWNKLS VALKEGNKRV KWEDRIPYAY WKGNPNVSPV
101: RGELMRCNFS DKYDPMVRLY VQDWRSEIEK GFRGSNLEDQ CTHRYKIYVE GNAWSVSEKY ILSCDSMTLL VKPEYYDFFI RSMVPMKHYW PIRRNNKCRD
201: LKFAVEWGNN NTEKAQVIGR QGSDYVMQNL EMKYVYDYML YVLQGYGKLM KLDVTVPENA TEVCSETMAC PITDGGLIRQ CMDDSLVMSP SIKAACKLPK
301: PYGDNELKRI LKKQESVKRR VRKWTDEYWN VRSGK

Best Arabidopsis Sequence Match ( AT3G61280.1 )
(BLAST)

001: MRENTQVAQF TEDHHQRHQT PITCLSSKLA KIWTLFTTKI FIFVLFIILL SASVSWMYAF VLGENKFQVT SIFTRNTKKS TPTKTTTTTD IPKIAIKIPL
101: NCTSLNSNTT QTCPSNYPTK FEPAISSSET CPDYFKWIHR DLKVWQKTGI TRETLERARP NAHFRIVIKS GRLYVHQYEK AFQTRDVFTI WGILQLLRMY
201: PGQIPDLELL FLCHDRPAIW KRDLKKKRKD TWPPPPLFHY CGHRDAYDIV FPDWSFWGWP ELNIKEWNKL SVALKEGNKK VKWEDRVPYA YWKGNPHVSP
301: IRGDLMRCNF SDKYDPMVRL YVQDWRSEIE AGFRGSNLED QCTHRYKIYI EGNAWSVSEK YILSCDSMTL LVKPEYYDFF FRSMVPMKHF WPIRQNNKCG
401: DLKFAVEWGN NNTEKAQIIG RQGSEYMMKN LKMKYVYDYM LYVLQGYGKL MKLDVTVPEN ATEVCSETMA CSITDGGRIR QCMDDSLVMS PSVKAACDLP
501: PSYGDYELKK FRKKQESAER KVEQWTNKYW NLRDPK

Arabidopsis Description

Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:Q5Q0C1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.