CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 3
extracellular 1
golgi 1
endoplasmic reticulum 1
vacuole 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007592.1-P	Field mustard	cytosol	63.27	98.21
CDY48931	Canola	plasma membrane	57.69	91.46
CDY48930	Canola	plasma membrane	85.96	84.34
AT3G61280.1	Thale cress	plasma membrane	85.77	83.21
CDX71752	Canola	cytosol	67.31	81.4
CDX71749	Canola	cytosol, golgi, plasma membrane	67.31	80.65
CDX89107	Canola	mitochondrion	65.77	74.67
VIT_15s0046g03100.t01	Wine grape	mitochondrion	15.0	60.94
VIT_15s0046g03140.t01	Wine grape	cytosol	24.81	55.36
CDY18896	Canola	golgi, plasma membrane, plastid	40.77	53.81
KRH40487	Soybean	cytosol	34.62	51.87
CDY69828	Canola	mitochondrion	37.69	51.04
GSMUA_Achr5P12260_001	Banana	mitochondrion	37.12	50.79
KRH00707	Soybean	cytosol	33.27	47.27
CDX71753	Canola	endoplasmic reticulum	44.42	47.05
CDY48932	Canola	endoplasmic reticulum	44.42	47.05
KRH65090	Soybean	extracellular	42.5	46.43
CDY45704	Canola	endoplasmic reticulum, golgi	44.42	46.39
CDY18897	Canola	golgi, mitochondrion, plastid, vacuole	45.58	46.38
VIT_15s0046g03130.t01	Wine grape	cytosol	19.62	45.95
CDY58789	Canola	endoplasmic reticulum, golgi	43.65	45.58
CDY27355	Canola	golgi, mitochondrion, nucleus, plasma membrane, plastid	46.15	45.45
KRH48168	Soybean	plasma membrane	43.27	45.27
CDY37069	Canola	golgi	45.38	45.12
Os02t0642700-01	Rice	plastid	40.96	44.94
CDX88050	Canola	plastid	45.19	44.01
KRH65092	Soybean	endoplasmic reticulum, plasma membrane, vacuole	42.31	44.0
CDY08097	Canola	plastid	46.15	43.88
CDY05887	Canola	golgi	45.77	43.51
CDX80388	Canola	plastid	44.23	42.99
HORVU6Hr1G060750.4	Barley	cytosol, peroxisome	40.19	42.05
TraesCS2B01G093400.1	Wheat	golgi, mitochondrion, plastid	39.81	41.24
EES07545	Sorghum	plastid	43.08	40.58
Zm00001d051287_P001	Maize	plastid	42.88	40.47
Os04t0534100-01	Rice	mitochondrion	34.04	40.41
Zm00001d002836_P006	Maize	plastid	41.92	40.3
CDX74769	Canola	mitochondrion, peroxisome, plasma membrane, plastid	49.04	39.97
TraesCS6A01G237500.1	Wheat	cytosol, mitochondrion	35.77	39.66
EES11181	Sorghum	plastid	42.12	39.46
TraesCS6D01G220200.2	Wheat	cytosol, mitochondrion	36.35	39.46
CDY42493	Canola	cytosol	65.38	39.31
TraesCS2B01G386200.1	Wheat	plastid	41.73	39.24
TraesCS2D01G365600.1	Wheat	plastid	41.54	38.92
CDY25494	Canola	mitochondrion	43.27	38.86
TraesCS2A01G368900.2	Wheat	plastid	40.96	38.38
TraesCSU01G025200.1	Wheat	plastid	41.35	38.19
CDY10259	Canola	mitochondrion	36.92	38.17
CDY06688	Canola	mitochondrion	36.54	37.7
CDY59071	Canola	endoplasmic reticulum, golgi, vacuole	36.35	37.2
CDY09932	Canola	endoplasmic reticulum, golgi	35.77	36.9
TraesCS6B01G266000.1	Wheat	plastid	41.54	35.35

Protein Annotations

EnsemblPlants:CDX71750	EnsemblPlantsGene:GSBRNA2T00155448001	GO:A0A078C4J0	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:LipoPS_modifying	PANTHER:PTHR12203	PANTHER:PTHR12203:SF28	PFAM:PF05686	ProteinID:CDX71750	ProteinID:CDX71750.1
SEG:seg	SMART:SM00672	TMHMM:TMhelix	UniParc:UPI0004EE8217	MapMan:35.2	:

Description

BnaC08g31240D

Coordinates

chrLK031795:-:302638..305045

Molecular Weight (calculated)

61531.1 Da

IEP (calculated)

9.387

GRAVY (calculated)

-0.528

Length

520 amino acids

Sequence
(BLAST)

001: MREDKHVAQA TEDHHHQRQQ NLAKTWITTK IYIFVLFIFL LCASLSWIFT FVLGESRFQV TSVFTRNTNK SATTTTNIPK IIIKIPLNCT LFHNNTTQTC
101: PSNYLTKFEP AISSSETCPD YFRWIHRDLK VWQKTGITRD TLEKARPHAH FRVVIKSGRL YVHQYEKAFQ TRDVFTIWGI LQLLRMYPGQ IPDLELLFLC
201: HDKPAIWKRD FKKDTWPPPP LFHYCGHRDA YDIVFPDWSF WGWPELNIKE WNKLSVALKE GNRRVKWEGR IPYAYWKGNP NVSPLRGELM RCNFSDKYDP
301: MVRLYVQDWR SEIEKGFRGS NLEDQCTHRY KIYVEGNAWS VSEKYILSCD SMTLLVKPEY YDFFIRSMVP MKHYWPIRRN NKCRDLKFAV EWGNNNTEKA
401: QVIGRQGSDY MMQNLEMKYV YDYMLYVLQG YGKLMKLDVT VPENATEVCS ETMACPITDG GLIRQCMDDS LVMSPSIKAA CNLPKPYGDN ELKRILKKQE
501: SVKRRVRKWT DEYWNGRSGK

Best Arabidopsis Sequence Match ( AT3G61280.1 )
(BLAST)

001: MRENTQVAQF TEDHHQRHQT PITCLSSKLA KIWTLFTTKI FIFVLFIILL SASVSWMYAF VLGENKFQVT SIFTRNTKKS TPTKTTTTTD IPKIAIKIPL
101: NCTSLNSNTT QTCPSNYPTK FEPAISSSET CPDYFKWIHR DLKVWQKTGI TRETLERARP NAHFRIVIKS GRLYVHQYEK AFQTRDVFTI WGILQLLRMY
201: PGQIPDLELL FLCHDRPAIW KRDLKKKRKD TWPPPPLFHY CGHRDAYDIV FPDWSFWGWP ELNIKEWNKL SVALKEGNKK VKWEDRVPYA YWKGNPHVSP
301: IRGDLMRCNF SDKYDPMVRL YVQDWRSEIE AGFRGSNLED QCTHRYKIYI EGNAWSVSEK YILSCDSMTL LVKPEYYDFF FRSMVPMKHF WPIRQNNKCG
401: DLKFAVEWGN NNTEKAQIIG RQGSEYMMKN LKMKYVYDYM LYVLQGYGKL MKLDVTVPEN ATEVCSETMA CSITDGGRIR QCMDDSLVMS PSVKAACDLP
501: PSYGDYELKK FRKKQESAER KVEQWTNKYW NLRDPK

Arabidopsis Description

Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:Q5Q0C1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.