CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 3
extracellular 1
golgi 1
endoplasmic reticulum 1
vacuole 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX71749	Canola	cytosol, golgi, plasma membrane	82.32	62.21
CDX71750	Canola	plasma membrane	91.46	57.69
AT3G61280.1	Thale cress	plasma membrane	83.84	51.31
CDY48930	Canola	plasma membrane	82.01	50.75
CDY18896	Canola	golgi, plasma membrane, plastid	51.22	42.64
CDX71752	Canola	cytosol	55.18	42.09
CDX89107	Canola	mitochondrion	55.18	39.52
Bra007592.1-P	Field mustard	cytosol	38.11	37.31
KRH40487	Soybean	cytosol	34.15	32.28
KRH00707	Soybean	cytosol	35.06	31.42
Os04t0534100-01	Rice	mitochondrion	37.5	28.08
CDY18897	Canola	golgi, mitochondrion, plastid, vacuole	41.46	26.61
CDY27355	Canola	golgi, mitochondrion, nucleus, plasma membrane, plastid	42.68	26.52
KRH65090	Soybean	extracellular	38.41	26.47
CDY37069	Canola	golgi	42.07	26.39
KRH48168	Soybean	plasma membrane	39.94	26.36
GSMUA_Achr5P12260_001	Banana	mitochondrion	30.49	26.32
CDX71753	Canola	endoplasmic reticulum	39.02	26.07
CDY48932	Canola	endoplasmic reticulum	39.02	26.07
CDY45704	Canola	endoplasmic reticulum, golgi	39.33	25.9
KRH65092	Soybean	endoplasmic reticulum, plasma membrane, vacuole	38.72	25.4
Os02t0642700-01	Rice	plastid	36.59	25.32
CDY08097	Canola	plastid	42.07	25.23
CDY58789	Canola	endoplasmic reticulum, golgi	38.11	25.1
CDX88050	Canola	plastid	40.55	24.91
CDY05887	Canola	golgi	41.16	24.68
CDY69828	Canola	mitochondrion	28.35	24.22
CDX80388	Canola	plastid	39.33	24.11
HORVU6Hr1G060750.4	Barley	cytosol, peroxisome	35.98	23.74
EES07545	Sorghum	plastid	38.72	23.01
Zm00001d051287_P001	Maize	plastid	38.41	22.87
Zm00001d002836_P006	Maize	plastid	37.5	22.74
TraesCS2B01G093400.1	Wheat	golgi, mitochondrion, plastid	34.76	22.71
EES11181	Sorghum	plastid	38.41	22.7
CDY10259	Canola	mitochondrion	34.15	22.27
CDY06688	Canola	mitochondrion	33.84	22.02
TraesCS2A01G368900.2	Wheat	plastid	36.89	21.8
TraesCS2B01G386200.1	Wheat	plastid	36.59	21.7
TraesCSU01G025200.1	Wheat	plastid	37.2	21.67
TraesCS2D01G365600.1	Wheat	plastid	36.59	21.62
CDY59071	Canola	endoplasmic reticulum, golgi, vacuole	33.23	21.46
CDY09932	Canola	endoplasmic reticulum, golgi	32.93	21.43
CDY42493	Canola	cytosol	55.18	20.92
CDY25494	Canola	mitochondrion	36.59	20.73
CDX74769	Canola	mitochondrion, peroxisome, plasma membrane, plastid	40.24	20.69
TraesCS6B01G266000.1	Wheat	plastid	37.8	20.29
TraesCS6D01G220200.2	Wheat	cytosol, mitochondrion	28.66	19.62
TraesCS6A01G237500.1	Wheat	cytosol, mitochondrion	27.74	19.4
VIT_15s0046g03140.t01	Wine grape	cytosol	12.2	17.17
VIT_15s0046g03100.t01	Wine grape	mitochondrion	1.22	3.12
VIT_15s0046g03130.t01	Wine grape	cytosol	0.91	1.35

Protein Annotations

EnsemblPlants:CDY48931	EnsemblPlantsGene:GSBRNA2T00092019001	GO:A0A078IFZ3	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:LipoPS_modifying	PANTHER:PTHR12203	PANTHER:PTHR12203:SF28	PFAM:PF05686	ProteinID:CDY48931	ProteinID:CDY48931.1
SEG:seg	SMART:SM00672	TMHMM:TMhelix	UniParc:UPI0004EDC0AE	UniProt:A0A078IFZ3	MapMan:35.2

Description

BnaA09g39060DBnaA09g39060D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IFZ3]

Coordinates

chrLK032801:-:96400..100419

Molecular Weight (calculated)

38736.8 Da

IEP (calculated)

9.643

GRAVY (calculated)

-0.331

Length

328 amino acids

Sequence
(BLAST)

001: MREDKDVAQA TEDHHHQRQQ NLATSLSSKL ARTWITTKIY IFVLFIFLLC ASLSWIFTFV LGESRFQVTS VFTRNTNKSA TTTTNIPKII IKIPLNCTLL
101: NNNTTQTCPS NYPTKFEPAI SSSETCPDYF RWIHRDLKVW QKTGITRDTL EKARPHAHFR VVIKSGRLYV HQYEKAFQTR DVFTIWGILQ LLRMYPGQIP
201: DLELLFLCHD KPAIWKRDFK KDTWPPPPLF HYCGHRDAYD IVFPDWSFWG WPELNIKEWN KLSVALKEGN KRVKWEDRIP YAYWKGNPNV SPVRGELMRC
301: NFSDKYDPMV RLYVQLCNIL IINMLNII

Best Arabidopsis Sequence Match ( AT3G61280.2 )
(BLAST)

001: MRENTQVAQF TEDHHQRHQT PITCLSSKLA KIWTLFTTKI FIFVLFIILL SASVSWMYAF VLGENKFQVT SIFTRNTKKS TPTKTTTTTD IPKIAIKIPL
101: NCTSLNSNTT QTCPSNYPTK FEPAISSSET CPDYFKWIHR DLKVWQKTGI TRETLERARP NAHFRIVIKS GRLYVHQYEK AFQTRDVFTI WGILQLLRMY
201: PGQIPDLELL FLCHDRPAIW KRDLKKKRKD TWPPPPLFHY CGHRDAYDIV FPDWSFWGWP ELNIKEWNKL SVALKEGNKK VKWEDRVPYA YWKGNPHVSP
301: IRGDLMRCNF SDKYDPMVRL YVQDWRSEIE AGFRGSNLED QCTHRYMCRI HSLDHVYLIN IRFVFNILVN ILDLNLDI

Arabidopsis Description

Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:Q5Q0C1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.