CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, cytosol

Predictor Summary:

nucleus 1
plasma membrane 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, plasma membrane
Any Predictor:	golgi, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48931	Canola	plasma membrane	62.21	82.32
CDY48930	Canola	plasma membrane	91.24	74.72
CDX71750	Canola	plasma membrane	80.65	67.31
CDX71752	Canola	cytosol	60.6	61.16
CDX89107	Canola	mitochondrion	58.99	55.9
CDY18896	Canola	golgi, plasma membrane, plastid	48.16	53.05
VIT_15s0046g03100.t01	Wine grape	mitochondrion	14.98	50.78
KRH40487	Soybean	cytosol	37.1	46.4
VIT_15s0046g03140.t01	Wine grape	cytosol	23.73	44.21
CDY69828	Canola	mitochondrion	38.48	43.49
GSMUA_Achr5P12260_001	Banana	mitochondrion	37.1	42.37
CDX71753	Canola	endoplasmic reticulum	46.31	40.94
CDY48932	Canola	endoplasmic reticulum	46.31	40.94
CDY45704	Canola	endoplasmic reticulum, golgi	46.77	40.76
CDY58789	Canola	endoplasmic reticulum, golgi	46.54	40.56
CDY37069	Canola	golgi	48.39	40.15
CDY27355	Canola	golgi, mitochondrion, nucleus, plasma membrane, plastid	48.62	39.96
KRH00707	Soybean	cytosol	33.64	39.89
Os04t0534100-01	Rice	mitochondrion	40.09	39.73
CDY18897	Canola	golgi, mitochondrion, plastid, vacuole	46.31	39.33
KRH65090	Soybean	extracellular	42.17	38.45
Os02t0642700-01	Rice	plastid	40.55	37.13
KRH48168	Soybean	plasma membrane	42.4	37.02
KRH65092	Soybean	endoplasmic reticulum, plasma membrane, vacuole	41.71	36.2
CDX88050	Canola	plastid	43.78	35.58
HORVU6Hr1G060750.4	Barley	cytosol, peroxisome	40.55	35.41
CDY08097	Canola	plastid	44.24	35.1
CDX80388	Canola	plastid	43.09	34.95
CDY05887	Canola	golgi	43.78	34.73
TraesCS2B01G093400.1	Wheat	golgi, mitochondrion, plastid	39.4	34.06
EES07545	Sorghum	plastid	42.63	33.51
Zm00001d002836_P006	Maize	plastid	41.47	33.27
Zm00001d051287_P001	Maize	plastid	41.94	33.03
EES11181	Sorghum	plastid	41.94	32.79
TraesCS6A01G237500.1	Wheat	cytosol, mitochondrion	34.79	32.2
TraesCS6D01G220200.2	Wheat	cytosol, mitochondrion	35.48	32.15
TraesCS2B01G386200.1	Wheat	plastid	40.78	32.01
TraesCS2A01G368900.2	Wheat	plastid	40.78	31.89
TraesCSU01G025200.1	Wheat	plastid	41.24	31.79
TraesCS2D01G365600.1	Wheat	plastid	40.55	31.71
CDX74769	Canola	mitochondrion, peroxisome, plasma membrane, plastid	46.54	31.66
CDY10259	Canola	mitochondrion	36.64	31.61
CDY09932	Canola	endoplasmic reticulum, golgi	36.64	31.55
CDY06688	Canola	mitochondrion	36.41	31.35
CDY59071	Canola	endoplasmic reticulum, golgi, vacuole	36.64	31.3
CDY25494	Canola	mitochondrion	41.24	30.92
CDY42493	Canola	cytosol	59.22	29.71
TraesCS6B01G266000.1	Wheat	plastid	41.71	29.62
VIT_15s0046g03130.t01	Wine grape	cytosol	13.59	26.58

Protein Annotations

EnsemblPlants:CDX71749	EnsemblPlantsGene:GSBRNA2T00155447001	GO:A0A078C6G8	InterPro:LipoPS_modifying	PANTHER:PTHR12203	PANTHER:PTHR12203:SF28
PFAM:PF05686	ProteinID:CDX71749	ProteinID:CDX71749.1	SEG:seg	SMART:SM00672	TMHMM:TMhelix
UniParc:UPI0004EDAF03	MapMan:35.2	:	:	:	:

Description

BnaC08g31250D

Coordinates

chrLK031795:-:298071..300546

Molecular Weight (calculated)

51237.5 Da

IEP (calculated)

9.448

GRAVY (calculated)

-0.464

Length

434 amino acids

Sequence
(BLAST)

001: MRENLHVARA TEDHHHQQQH KLATNLSSKL AKTRVTAKIH IFVLCIFLLS ASLSWIFFTF VLGESRFQVT SVFTRDTNKS ATTITTIPKT IPLNCTLLDN
101: TTIQTCPSNY PTKFEPTISS SETCPGYFRW IQQDLKVWQE TGITRETLEK AKPHAHFRVV IKSGRLYVDQ YVKSYQTRDV FTIWGILQLL RMYPGQIPDL
201: ELLFLCYDKP AIWKRDFNKT RKDTWPPPPL FRYCGHRDAY DIVFPDWSFW GWPEVNIKEW KKLSVALQEG NRRVKWKDRI PYAYWKGNPH VSTPIRKELM
301: RCNFSDKYDP MVRLYAQDWR SESKKGFKGS NLEDQCTHRY KIYIEGEAWS VSEKYILSCD SMTLLVKPEF HDFFIRSMVP MKHYWPIRQN SKCGDLKFAV
401: EWGNNNTDKV NNTPYVYYIS VTLTILTEIK EIVE

Best Arabidopsis Sequence Match ( AT3G61280.2 )
(BLAST)

001: MRENTQVAQF TEDHHQRHQT PITCLSSKLA KIWTLFTTKI FIFVLFIILL SASVSWMYAF VLGENKFQVT SIFTRNTKKS TPTKTTTTTD IPKIAIKIPL
101: NCTSLNSNTT QTCPSNYPTK FEPAISSSET CPDYFKWIHR DLKVWQKTGI TRETLERARP NAHFRIVIKS GRLYVHQYEK AFQTRDVFTI WGILQLLRMY
201: PGQIPDLELL FLCHDRPAIW KRDLKKKRKD TWPPPPLFHY CGHRDAYDIV FPDWSFWGWP ELNIKEWNKL SVALKEGNKK VKWEDRVPYA YWKGNPHVSP
301: IRGDLMRCNF SDKYDPMVRL YVQDWRSEIE AGFRGSNLED QCTHRYMCRI HSLDHVYLIN IRFVFNILVN ILDLNLDI

Arabidopsis Description

Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:Q5Q0C1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.