CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 1
mitochondrion 1
endoplasmic reticulum 3
extracellular 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, endoplasmic reticulum, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX71753	Canola	endoplasmic reticulum	98.98	98.98
Bra007590.1-P	Field mustard	cytosol	98.17	98.17
CDY69828	Canola	mitochondrion	74.54	95.31
CDY58789	Canola	endoplasmic reticulum, golgi	83.91	82.73
CDY45704	Canola	endoplasmic reticulum, golgi	83.91	82.73
AT3G61270.1	Thale cress	cytosol, golgi, plasma membrane	83.3	82.13
CDY18897	Canola	golgi, mitochondrion, plastid, vacuole	70.47	67.71
CDY37069	Canola	golgi	71.28	66.92
CDY27355	Canola	golgi, mitochondrion, nucleus, plasma membrane, plastid	71.28	66.29
KRH65106	Soybean	cytosol	23.22	65.9
VIT_15s0046g03110.t01	Wine grape	cytosol	48.68	63.56
GSMUA_Achr5P12260_001	Banana	mitochondrion	46.64	60.26
KRH65107	Soybean	cytosol	17.72	56.86
VIT_15s0046g03150.t01	Wine grape	golgi	58.25	55.11
KRH48182	Soybean	cytosol, golgi, plasma membrane	57.03	54.9
CDX71752	Canola	cytosol	45.62	52.09
Solyc01g094380.2.1	Tomato	cytosol, extracellular, golgi, plastid	52.95	50.68
PGSC0003DMT400055754	Potato	nucleus	15.68	50.66
Os02t0642700-01	Rice	plastid	47.25	48.95
CDX74769	Canola	mitochondrion, peroxisome, plasma membrane, plastid	61.3	47.18
CDX89107	Canola	mitochondrion	43.79	46.94
HORVU6Hr1G060750.4	Barley	cytosol, peroxisome	47.45	46.88
CDX71749	Canola	cytosol, golgi, plasma membrane	40.94	46.31
TraesCS2B01G093400.1	Wheat	golgi, mitochondrion, plastid	47.05	46.02
CDX88050	Canola	plastid	49.69	45.69
Solyc05g048800.1.1	Tomato	cytosol	22.4	45.27
CDX80388	Canola	plastid	49.08	45.05
CDY48930	Canola	plasma membrane	48.47	44.91
CDX71750	Canola	plasma membrane	47.05	44.42
TraesCS6A01G237500.1	Wheat	cytosol, mitochondrion	42.36	44.35
Zm00001d002836_P006	Maize	plastid	48.27	43.81
TraesCS6D01G220200.2	Wheat	cytosol, mitochondrion	42.36	43.42
EES11181	Sorghum	plastid	49.08	43.42
CDY08097	Canola	plastid	48.07	43.14
EES07545	Sorghum	plastid	48.27	42.93
TraesCS2A01G368900.2	Wheat	plastid	48.47	42.88
CDY05887	Canola	golgi	47.66	42.78
TraesCS2D01G365600.1	Wheat	plastid	48.27	42.7
TraesCS2B01G386200.1	Wheat	plastid	48.07	42.68
Zm00001d051287_P001	Maize	plastid	47.86	42.65
CDY18896	Canola	golgi, plasma membrane, plastid	33.6	41.88
CDY25494	Canola	mitochondrion	49.29	41.8
Os04t0534100-01	Rice	mitochondrion	37.27	41.78
TraesCSU01G025200.1	Wheat	plastid	47.66	41.56
CDY09932	Canola	endoplasmic reticulum, golgi	40.94	39.88
CDY06688	Canola	mitochondrion	40.53	39.48
CDY59071	Canola	endoplasmic reticulum, golgi, vacuole	40.73	39.37
CDY10259	Canola	mitochondrion	40.33	39.36
CDY48931	Canola	plasma membrane	26.07	39.02
TraesCS6B01G266000.1	Wheat	plastid	47.66	38.3
CDY42493	Canola	cytosol	43.18	24.51

Protein Annotations

EnsemblPlants:CDY48932	EnsemblPlantsGene:GSBRNA2T00092020001	GO:A0A078IG09	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:LipoPS_modifying	ncoils:Coil	PANTHER:PTHR12203	PANTHER:PTHR12203:SF28	PFAM:PF05686	ProteinID:CDY48932
ProteinID:CDY48932.1	SMART:SM00672	TMHMM:TMhelix	UniParc:UPI0004EE7AFB	UniProt:A0A078IG09	MapMan:35.2

Description

BnaA09g39050DBnaA09g39050D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IG09]

Coordinates

chrLK032801:-:108003..109934

Molecular Weight (calculated)

57921.1 Da

IEP (calculated)

7.778

GRAVY (calculated)

-0.585

Length

491 amino acids

Sequence
(BLAST)

001: MKLNNNDEQH KVVSLLGKNV VKATVFIVVS LFILGYLHFN DSADFKLITK INVPKFPNQC GAVQNQSHQV HISQNLASRL NLNRSKQTTC PSYFRWIHED
101: LRPWKATGIT RDMVEKAGRT AHFRLVIHGG KAYVKRYKKS IQTRADFTLW GILQLLRWYP GRLPDLELMF DADDRPIVRS DDFKGQNMDP PPLFRYCSDD
201: ASLDIVFPDW SFWGWAEINI EPWGKSLEAI KKGNNITQWK DRVAYAYWKG NPDVDPGRKD LLRCNVSEHE DWNTRLYIQD WDKESKEGFK NSNLENQCTH
301: RYKIYIEGWA WSVSEKYIMA CDSMTLYVKP RFYDFYIRGM MPLQHYWPIR DDSKCTSLKF AVHWGNTHVD KAREIGEVGS RFIREEVNMK YVYDYMFHLL
401: NEYAKLLKFK PEFPSYAEEI TPDSMGCPAT ERWRDFMAES MVMSPSEDLP CEMLPPYDRL ALKEVLEKKA NLTRQVELWE DQYFHDLTNK P

Best Arabidopsis Sequence Match ( AT3G61270.1 )
(BLAST)

001: MKMNNNDGQH NKTVTFPRKS IVKATVFIVV LFISAAILDL LGYLDFNAFA GLKLTTKTKE PNPYGCDFVQ NQSSQTPISQ NRKSRLNPNN SSKSSTCPSY
101: FRWIHEDLRP WKQTGITRGM IEEASRTAHF RLVIRNGKAY VKRYKKSIQT RDEFTLWGIL QLLRWYPGKL PDLELMFDAD DRPVVRSVDF IGQQKEPPPV
201: FRYCSDDASL DIVFPDWSFW GWAEVNVKPW GKSLEAIKEG NSMTQWKDRV AYAYWRGNPY VDPGRGDLLK CNATEHEEWN TRLYIQDWDK ETKEGFKNSN
301: LENQCTHRYK IYIEGWAWSV SEKYIMACDS MTLYVKPRFY DFYIRGMMPL QHYWPIRDDS KCTSLKFAVH WGNTHEDKAR EIGEVGSRFI REEVNMQYVY
401: DYMFHLLKEY ATLLKFKPEI PLDAEEITPD SMGCPATERW RDFKAESMII SPSEESPCEM LPPYDPLALK EVLERKANLT RQVELWENQY FQNLTNKP

Arabidopsis Description

Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:Q9M2D7]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.