Factsheet for Bra007590.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
endoplasmic reticulum 2
plastid 1
cytosol 3
extracellular 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol, plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48932	Canola	endoplasmic reticulum	98.17	98.17
CDX71753	Canola	endoplasmic reticulum	97.96	97.96
Bra003444.1-P	Field mustard	endoplasmic reticulum, golgi	83.71	82.53
AT3G61270.1	Thale cress	cytosol, golgi, plasma membrane	83.1	81.93
KRH65106	Soybean	cytosol	23.22	65.9
VIT_15s0046g03110.t01	Wine grape	cytosol	48.68	63.56
Bra039310.1-P	Field mustard	golgi, mitochondrion	54.38	61.81
GSMUA_Achr5P12260_001	Banana	mitochondrion	46.64	60.26
KRH65107	Soybean	cytosol	17.72	56.86
KRH48182	Soybean	cytosol, golgi, plasma membrane	57.23	55.1
VIT_15s0046g03150.t01	Wine grape	golgi	58.04	54.91
Bra007591.1-P	Field mustard	cytosol	45.42	51.86
Bra007592.1-P	Field mustard	cytosol	35.23	51.64
PGSC0003DMT400055754	Potato	nucleus	15.89	51.32
Solyc01g094380.2.1	Tomato	cytosol, extracellular, golgi, plastid	52.75	50.49
Os02t0642700-01	Rice	plastid	47.25	48.95
Bra004942.1-P	Field mustard	mitochondrion, peroxisome, plasma membrane, plastid	61.71	47.49
HORVU6Hr1G060750.4	Barley	cytosol, peroxisome	47.66	47.08
Solyc05g048800.1.1	Tomato	cytosol	22.61	45.68
TraesCS2B01G093400.1	Wheat	golgi, mitochondrion, plastid	46.64	45.62
Bra009709.1-P	Field mustard	plastid	49.49	45.51
TraesCS6A01G237500.1	Wheat	cytosol, mitochondrion	42.36	44.35
Bra007593.1-P	Field mustard	endoplasmic reticulum, nucleus, plasma membrane	47.66	44.15
Bra018021.1-P	Field mustard	golgi	48.27	43.89
Zm00001d002836_P006	Maize	plastid	48.27	43.81
TraesCS6D01G220200.2	Wheat	cytosol, mitochondrion	42.36	43.42
EES11181	Sorghum	plastid	49.08	43.42
EES07545	Sorghum	plastid	48.47	43.12
Zm00001d051287_P001	Maize	plastid	48.07	42.83
TraesCS2A01G368900.2	Wheat	plastid	48.27	42.7
TraesCS2D01G365600.1	Wheat	plastid	48.07	42.52
TraesCS2B01G386200.1	Wheat	plastid	47.86	42.5
TraesCSU01G025200.1	Wheat	plastid	47.66	41.56
Os04t0534100-01	Rice	mitochondrion	37.07	41.55
Bra027639.1-P	Field mustard	mitochondrion	48.47	41.18
Bra031558.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion	40.33	39.21
Bra015563.1-P	Field mustard	mitochondrion	40.12	39.09
TraesCS6B01G266000.1	Wheat	plastid	47.86	38.46

Protein Annotations

EnsemblPlants:Bra007590.1	EnsemblPlants:Bra007590.1-P	EnsemblPlantsGene:Bra007590	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:LipoPS_modifying	ncoils:Coil	PANTHER:PTHR12203	PANTHER:PTHR12203:SF28	PFAM:PF05686	SMART:SM00672
TMHMM:TMhelix	UniParc:UPI000254294B	UniProt:M4CTP6	MapMan:35.2	:	:

Description

AT3G61270 (E=5e-247) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Lipopolysaccharide-modifying protein (InterPro:IPR006598), Protein of unknown function DUF821, CAP10-like (InterPro:IPR008539); BEST Arabidopsis thaliana protein match is: DTA2 (DOWNSTREAM TARGET OF AGL15 2) (TAIR:AT2G45830.1); Has 461 Blast hits to 457 proteins in 95 species: Archae - 0; Bacteria - 32; Metazoa - 201; Fungi - 83; Plants - 117; Viruses - 4; Other Eukaryotes - 24 (source: NCBI BLink).

Coordinates

chrA09:+:29916845..29918778

Molecular Weight (calculated)

57856.9 Da

IEP (calculated)

7.569

GRAVY (calculated)

-0.595

Length

491 amino acids

Sequence
(BLAST)

001: MKLNNNDEQH KVVSLLGKNI VKATVFIAVS LFTLAYLHFN DSADFKLITK INVPKFPNQC GAVQNQTHQV HVSQNLASRL NLNRSKQTTC PSYFRWIHED
101: LRPWKATGIT RDMVEKAGRT AHFRLVIHGG KAYVKRYKKS IQTRADFTLW GILQLLRWYP GRLPDLELMF DADDRPIVRS DDFKGQNMDP PPLFRYCSDD
201: ASLDIVFPDW SFWGWAEINI EPWGKSLEAI KKGNNITQWK DRVAYAYWKG NPDVDPGRKD LLRCNVSEHE DWNTRLYIQD WDKESKEGFK NSNLENQCTH
301: RYKIYIEGWA WSVSEKYIMA CDSMTLYVKP RFYDFYIRGM MPLQHYWPIR DDSKCTSLKF AVHWGNTHVD KAREIGEVGS RFIREEVNMK YVYDYMFHLL
401: NEYAKLLKFK PEFPSDAEEI TPDSMGCPAT ERWRDFMAES MVISPSEELP CEMLPPYDRL ALKEVLEKKA NLTRQVELWE DQYFHDLTNK P

Best Arabidopsis Sequence Match ( AT3G61270.1 )
(BLAST)

001: MKMNNNDGQH NKTVTFPRKS IVKATVFIVV LFISAAILDL LGYLDFNAFA GLKLTTKTKE PNPYGCDFVQ NQSSQTPISQ NRKSRLNPNN SSKSSTCPSY
101: FRWIHEDLRP WKQTGITRGM IEEASRTAHF RLVIRNGKAY VKRYKKSIQT RDEFTLWGIL QLLRWYPGKL PDLELMFDAD DRPVVRSVDF IGQQKEPPPV
201: FRYCSDDASL DIVFPDWSFW GWAEVNVKPW GKSLEAIKEG NSMTQWKDRV AYAYWRGNPY VDPGRGDLLK CNATEHEEWN TRLYIQDWDK ETKEGFKNSN
301: LENQCTHRYK IYIEGWAWSV SEKYIMACDS MTLYVKPRFY DFYIRGMMPL QHYWPIRDDS KCTSLKFAVH WGNTHEDKAR EIGEVGSRFI REEVNMQYVY
401: DYMFHLLKEY ATLLKFKPEI PLDAEEITPD SMGCPATERW RDFKAESMII SPSEESPCEM LPPYDPLALK EVLERKANLT RQVELWENQY FQNLTNKP

Arabidopsis Description

Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:Q9M2D7]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.