Factsheet for Bra039310.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi

Predictor Summary:

plastid 2
golgi 2
nucleus 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37069	Canola	golgi	98.38	81.26
AT2G45830.1	Thale cress	mitochondrion	80.09	66.16
Bra003444.1-P	Field mustard	endoplasmic reticulum, golgi	64.81	56.22
Bra007590.1-P	Field mustard	cytosol	61.81	54.38
KRH65106	Soybean	cytosol	21.3	53.18
VIT_15s0046g03110.t01	Wine grape	cytosol	40.74	46.81
Bra004942.1-P	Field mustard	mitochondrion, peroxisome, plasma membrane, plastid	66.67	45.14
VIT_15s0046g03150.t01	Wine grape	golgi	53.01	44.12
GSMUA_Achr5P12260_001	Banana	mitochondrion	37.73	42.89
Solyc05g048800.1.1	Tomato	cytosol	23.38	41.56
KRH48182	Soybean	cytosol, golgi, plasma membrane	48.84	41.37
KRH65107	Soybean	cytosol	14.35	40.52
Solyc01g094380.2.1	Tomato	cytosol, extracellular, golgi, plastid	47.45	39.96
Bra007591.1-P	Field mustard	cytosol	38.43	38.6
PGSC0003DMT400055754	Potato	nucleus	12.96	36.84
Os02t0642700-01	Rice	plastid	38.89	35.44
TraesCS2B01G093400.1	Wheat	golgi, mitochondrion, plastid	40.74	35.06
Bra007593.1-P	Field mustard	endoplasmic reticulum, nucleus, plasma membrane	42.36	34.53
Bra009709.1-P	Field mustard	plastid	42.59	34.46
HORVU6Hr1G060750.4	Barley	cytosol, peroxisome	39.58	34.41
Bra018021.1-P	Field mustard	golgi	41.67	33.33
TraesCS2A01G368900.2	Wheat	plastid	42.36	32.97
TraesCS2D01G365600.1	Wheat	plastid	41.67	32.43
TraesCS2B01G386200.1	Wheat	plastid	41.44	32.37
Bra007592.1-P	Field mustard	cytosol	25.0	32.24
Zm00001d002836_P006	Maize	plastid	40.05	31.98
EES11181	Sorghum	plastid	40.74	31.71
TraesCSU01G025200.1	Wheat	plastid	40.97	31.44
Zm00001d051287_P001	Maize	plastid	39.35	30.85
Bra027639.1-P	Field mustard	mitochondrion	41.2	30.8
EES07545	Sorghum	plastid	38.89	30.43
TraesCS6A01G237500.1	Wheat	cytosol, mitochondrion	32.64	30.06
TraesCS6D01G220200.2	Wheat	cytosol, mitochondrion	32.87	29.65
Os04t0534100-01	Rice	mitochondrion	28.94	28.54
TraesCS6B01G266000.1	Wheat	plastid	40.28	28.48
Bra015563.1-P	Field mustard	mitochondrion	33.1	28.37
Bra031558.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion	32.64	27.92

Protein Annotations

EnsemblPlants:Bra039310.1	EnsemblPlants:Bra039310.1-P	EnsemblPlantsGene:Bra039310	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:LipoPS_modifying	ncoils:Coil	PANTHER:PTHR12203	PANTHER:PTHR12203:SF28	PFAM:PF05686	SEG:seg
SMART:SM00672	TMHMM:TMhelix	UniParc:UPI0002544453	UniProt:M4FDY9	MapMan:35.2	:

Description

AT2G45830 (E=2e-142) DTA2 | DTA2 (DOWNSTREAM TARGET OF AGL15 2)

Coordinates

chrA04:+:18657984..18659958

Molecular Weight (calculated)

50530.2 Da

IEP (calculated)

8.976

GRAVY (calculated)

-0.702

Length

432 amino acids

Sequence
(BLAST)

001: MLQRKSMKRN NNSDTLTNRH ASLKTTSYPG KRIAKATLFF VSCLFISAGL LDLLGCFDST TFAGLKQVTT IRKQPITTHH KFPDQCDVVQ NQTQQQQERQ
101: QLPMSEDGTK NDKARSSHSR PSTCPSYFRW IHEDLRPWRE TGITRGMLEK ARNNKAHFRV IILDGKVYVK KYRKSIDTRD VFTLWGILQL LRWYPGRLPD
201: LELMFDANDR PTVRSNDYRG QQHPAPPPIF RYCSDDASLD IVFPDWSFWG WAEVNIKPWA KSMVAIQEGN KMTPWKDRVA YAYWRGNPNV APTRRDLLTC
301: NVSDQQDWNT RLYINARKIG EEGSRYIREE VNIEHVYDYM FHLMNEYAKL LKFKPEIPWG ATEITPDSMG CPATGRWRDF MEESMVMSPC EVSPCEMPLP
401: YSPVELREVL ERKANATRQV ELWEDQYYSN KP

Best Arabidopsis Sequence Match ( AT2G45830.1 )
(BLAST)

001: MLQRKSMKRN NNNLLTNKNK YVYLKTASHP AKSIAKATLF LVTSLFISAG LLDLLGCFDF TTFTGLKQVT TSIRKSPITS QRFPNQCGVV QNQTQLFPQN
101: GSSRNNDKPR SSHSRISTCP SYFRWIHEDL RPWKETGVTR GMLEKARRTA HFRVVILDGR VYVKKYRKSI QTRDVFTLWG IVQLLRWYPG RLPDLELMFD
201: PDDRPTVRSK DFQGQQHPAP PPLFRYCSDD ASLDIVFPDW SFWGWAEVNI KPWDKSLVAI EEGNKMTQWK DRVAYAYWRG NPNVAPTRRD LLRCNVSAQE
301: DWNTRLYIQD WDRESREGFK NSNLENQCTH RYKIYIEGWA WSVSEKYIMA CDSMTLYVRP MFYDFYVRGM MPLQHYWPIR DTSKCTSLKF AVHWGNTHLD
401: QASKIGEEGS RFIREEVKME YVYDYMFHLM NEYAKLLKFK PEIPWGATEI TPDIMGCSAT GRWRDFMEES MVMFPSEESP CEMPSPFNPH DLKEILERKT
501: NLTRQVEWWE DQYFHDLANI KKP

Arabidopsis Description

DTA2Downstream target of AGL15 2 [Source:UniProtKB/TrEMBL;Acc:F4IH50]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.