Factsheet for VIT_15s0046g03110.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
peroxisome 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_15s0046g03150.t01	Wine grape	golgi	95.21	68.98
KRH65106	Soybean	cytosol	31.38	68.21
VIT_02s0025g03710.t01	Wine grape	cytosol	48.4	66.91
KRH65107	Soybean	cytosol	26.86	66.01
VIT_16s0050g00190.t01	Wine grape	nucleus	46.28	62.14
CDY69828	Canola	mitochondrion	62.77	61.46
GSMUA_Achr5P12260_001	Banana	mitochondrion	60.64	60.0
PGSC0003DMT400055754	Potato	nucleus	24.2	59.87
VIT_15s0046g03130.t01	Wine grape	cytosol	34.04	57.66
VIT_15s0046g03100.t01	Wine grape	mitochondrion	18.88	55.47
KRH48182	Soybean	cytosol, golgi, plasma membrane	68.88	50.78
CDX71753	Canola	endoplasmic reticulum	63.83	48.88
Bra007590.1-P	Field mustard	cytosol	63.56	48.68
CDY48932	Canola	endoplasmic reticulum	63.56	48.68
CDY58789	Canola	endoplasmic reticulum, golgi	64.36	48.59
VIT_15s0046g03080.t01	Wine grape	cytosol	54.52	48.46
Bra003444.1-P	Field mustard	endoplasmic reticulum, golgi	64.1	48.39
AT3G61270.1	Thale cress	cytosol, golgi, plasma membrane	63.83	48.19
VIT_15s0046g03140.t01	Wine grape	cytosol	29.79	48.07
VIT_15s0046g03120.t01	Wine grape	cytosol	55.05	48.03
VIT_16s0050g00160.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	63.56	47.9
CDY45704	Canola	endoplasmic reticulum, golgi	63.3	47.79
Solyc01g094380.2.1	Tomato	cytosol, extracellular, golgi, plastid	64.89	47.56
VIT_15s0046g03050.t01	Wine grape	cytosol	53.46	47.52
AT2G45830.1	Thale cress	mitochondrion	65.16	46.85
CDY37069	Canola	golgi	64.89	46.65
CDY18897	Canola	golgi, mitochondrion, plastid, vacuole	62.77	46.18
Os02t0642700-01	Rice	plastid	57.98	45.99
CDY27355	Canola	golgi, mitochondrion, nucleus, plasma membrane, plastid	64.36	45.83
TraesCS6A01G237500.1	Wheat	cytosol, mitochondrion	56.91	45.63
TraesCS6D01G220200.2	Wheat	cytosol, mitochondrion	57.45	45.09
HORVU6Hr1G060750.4	Barley	cytosol, peroxisome	57.18	43.26
TraesCS2B01G093400.1	Wheat	golgi, mitochondrion, plastid	57.18	42.83
Bra039310.1-P	Field mustard	golgi, mitochondrion	46.81	40.74
Zm00001d002836_P006	Maize	plastid	57.18	39.74
TraesCS2B01G386200.1	Wheat	plastid	58.24	39.6
Solyc05g048800.1.1	Tomato	cytosol	25.53	39.51
TraesCS2D01G365600.1	Wheat	plastid	57.98	39.28
VIT_15s0046g03070.t01	Wine grape	golgi	54.52	39.05
EES11181	Sorghum	plastid	57.45	38.92
TraesCS2A01G368900.2	Wheat	plastid	57.18	38.74
Zm00001d051287_P001	Maize	plastid	56.12	38.29
TraesCSU01G025200.1	Wheat	plastid	56.91	38.01
EES07545	Sorghum	plastid	55.59	37.86
VIT_15s0046g03090.t01	Wine grape	cytoskeleton, golgi, nucleus	53.19	37.24
Os04t0534100-01	Rice	mitochondrion	42.82	36.76
Bra004942.1-P	Field mustard	mitochondrion, peroxisome, plasma membrane, plastid	60.9	35.89
CDX74769	Canola	mitochondrion, peroxisome, plasma membrane, plastid	60.64	35.74
TraesCS6B01G266000.1	Wheat	plastid	56.65	34.86
VIT_15s0046g03060.t01	Wine grape	cytosol	10.64	33.61
VIT_06s0004g06630.t01	Wine grape	plasma membrane	39.89	32.33
VIT_02s0025g03720.t01	Wine grape	endoplasmic reticulum, extracellular, plasma membrane	17.02	28.96

Protein Annotations

EntrezGene:100249927	MapMan:35.2	EMBL:AM472559	ProteinID:CAN70601	ProteinID:CAN70601.1	ProteinID:CCB62395
ProteinID:CCB62395.1	UniProt:F6I5Z9	EMBL:FN596755	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005623	GO:GO:0006629	GO:GO:0006664	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0012505	GO:GO:0016740	GO:GO:0046527	InterPro:LipoPS_modifying	PFAM:PF05686	PANTHER:PTHR12203
PANTHER:PTHR12203:SF28	SMART:SM00672	UniParc:UPI00015CA710	ArrayExpress:VIT_15s0046g03110	EnsemblPlantsGene:VIT_15s0046g03110	EnsemblPlants:VIT_15s0046g03110.t01
RefSeq:XP_019081184.1	:	:	:	:	:

Description

No Description!

Coordinates

chr15:-:19730089..19731809

Molecular Weight (calculated)

44705.0 Da

IEP (calculated)

7.714

GRAVY (calculated)

-0.752

Length

376 amino acids

Sequence
(BLAST)

001: MDPSRSTALK ADRNHQGHVE KFRKSIQTRD MFTLWGILQL LRWYPGRLPD LELMFDCDDR PVVRMRDFRG PSAAPPPLFR YCGDDWSLDI VFPDWSFWGW
101: AETNIKPWRN VLKDIKEGNR RTKWKDRVPL AYWRGNPHVA PTRGDLLKCN VSDKADWNTR LYLQDWDQQS KIGYRQSNLE DQCTHIYKIY IEGWAWSVSE
201: KYILACDSMT LLTRPRYYDF FIRGLVPLQH YWPIRDNNKC RDLRFAVEWG NNHTDKAQTM GETTSKFIQE DLKMDYVYDY MFHLLNEYAK LLKFKPTIPP
301: GAVEVCAETM ACPAEGAWRK FMEESLEKIP TDTTPCSLPP PYDPPGFHDF IERKANATRQ VELWENEYWD KQNKKQ

Best Arabidopsis Sequence Match ( AT2G45830.1 )
(BLAST)

001: MLQRKSMKRN NNNLLTNKNK YVYLKTASHP AKSIAKATLF LVTSLFISAG LLDLLGCFDF TTFTGLKQVT TSIRKSPITS QRFPNQCGVV QNQTQLFPQN
101: GSSRNNDKPR SSHSRISTCP SYFRWIHEDL RPWKETGVTR GMLEKARRTA HFRVVILDGR VYVKKYRKSI QTRDVFTLWG IVQLLRWYPG RLPDLELMFD
201: PDDRPTVRSK DFQGQQHPAP PPLFRYCSDD ASLDIVFPDW SFWGWAEVNI KPWDKSLVAI EEGNKMTQWK DRVAYAYWRG NPNVAPTRRD LLRCNVSAQE
301: DWNTRLYIQD WDRESREGFK NSNLENQCTH RYKIYIEGWA WSVSEKYIMA CDSMTLYVRP MFYDFYVRGM MPLQHYWPIR DTSKCTSLKF AVHWGNTHLD
401: QASKIGEEGS RFIREEVKME YVYDYMFHLM NEYAKLLKFK PEIPWGATEI TPDIMGCSAT GRWRDFMEES MVMFPSEESP CEMPSPFNPH DLKEILERKT
501: NLTRQVEWWE DQYFHDLANI KKP

Arabidopsis Description

DTA2Downstream target of AGL15 2 [Source:UniProtKB/TrEMBL;Acc:F4IH50]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.