Factsheet for Bra003444.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

plastid 3
mitochondrion 1
endoplasmic reticulum 3
cytosol 1
extracellular 2
vacuole 2
plasma membrane 2
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol, plastid
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY58789	Canola	endoplasmic reticulum, golgi	99.0	99.0
Bra007590.1-P	Field mustard	cytosol	82.53	83.71
AT3G61270.1	Thale cress	cytosol, golgi, plasma membrane	81.93	81.93
Bra039310.1-P	Field mustard	golgi, mitochondrion	56.22	64.81
KRH65106	Soybean	cytosol	22.49	64.74
VIT_15s0046g03110.t01	Wine grape	cytosol	48.39	64.1
GSMUA_Achr5P12260_001	Banana	mitochondrion	45.18	59.21
VIT_15s0046g03150.t01	Wine grape	golgi	58.43	56.07
KRH65107	Soybean	cytosol	17.07	55.56
KRH48182	Soybean	cytosol, golgi, plasma membrane	55.22	53.92
Solyc01g094380.2.1	Tomato	cytosol, extracellular, golgi, plastid	53.21	51.66
Bra007591.1-P	Field mustard	cytosol	44.38	51.4
PGSC0003DMT400055754	Potato	nucleus	15.66	51.32
Bra007592.1-P	Field mustard	cytosol	33.94	50.45
Os02t0642700-01	Rice	plastid	47.39	49.79
HORVU6Hr1G060750.4	Barley	cytosol, peroxisome	47.39	47.48
Bra004942.1-P	Field mustard	mitochondrion, peroxisome, plasma membrane, plastid	60.64	47.34
TraesCS2B01G093400.1	Wheat	golgi, mitochondrion, plastid	47.39	47.01
Bra009709.1-P	Field mustard	plastid	50.0	46.63
TraesCS6A01G237500.1	Wheat	cytosol, mitochondrion	42.97	45.63
Solyc05g048800.1.1	Tomato	cytosol	22.09	45.27
TraesCS6D01G220200.2	Wheat	cytosol, mitochondrion	42.97	44.68
Bra007593.1-P	Field mustard	endoplasmic reticulum, nucleus, plasma membrane	47.39	44.53
Zm00001d002836_P006	Maize	plastid	47.99	44.18
Bra018021.1-P	Field mustard	golgi	47.79	44.07
EES11181	Sorghum	plastid	48.39	43.42
Zm00001d051287_P001	Maize	plastid	47.99	43.38
EES07545	Sorghum	plastid	47.99	43.3
TraesCS2D01G365600.1	Wheat	plastid	48.19	43.24
TraesCS2A01G368900.2	Wheat	plastid	47.39	42.52
TraesCS2B01G386200.1	Wheat	plastid	47.19	42.5
Os04t0534100-01	Rice	mitochondrion	37.35	42.47
TraesCSU01G025200.1	Wheat	plastid	47.79	42.27
Bra027639.1-P	Field mustard	mitochondrion	47.59	41.0
TraesCS6B01G266000.1	Wheat	plastid	47.79	38.95
Bra015563.1-P	Field mustard	mitochondrion	39.36	38.89
Bra031558.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion	39.16	38.61

Protein Annotations

EnsemblPlants:Bra003444.1	EnsemblPlants:Bra003444.1-P	EnsemblPlantsGene:Bra003444	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:LipoPS_modifying	ncoils:Coil	PANTHER:PTHR12203	PANTHER:PTHR12203:SF28	PFAM:PF05686	SMART:SM00672
TMHMM:TMhelix	UniParc:UPI0002541804	UniProt:M4CGW1	MapMan:35.2	:	:

Description

AT3G61270 (E=3e-250) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Lipopolysaccharide-modifying protein (InterPro:IPR006598), Protein of unknown function DUF821, CAP10-like (InterPro:IPR008539); BEST Arabidopsis thaliana protein match is: DTA2 (DOWNSTREAM TARGET OF AGL15 2) (TAIR:AT2G45830.1); Has 461 Blast hits to 457 proteins in 95 species: Archae - 0; Bacteria - 32; Metazoa - 201; Fungi - 83; Plants - 117; Viruses - 4; Other Eukaryotes - 24 (source: NCBI BLink).

Coordinates

chrA07:+:13211967..13213789

Molecular Weight (calculated)

59023.1 Da

IEP (calculated)

7.755

GRAVY (calculated)

-0.623

Length

498 amino acids

Sequence
(BLAST)

001: MKTNNNDEQR KTLPFPGKYI LKSTVFIVAS LFISAALLGF LGYLNFNAFA GFKLIPKRFK PRFPYQCDVQ DQTHQIHFSQ NLTSRLHTSR SQPSSCPSYF
101: RWIHEDLRPW KETGITRNMV EKASKTAHFR LVIHRGKAYV KRYRKSIQTR DDFTLWGILQ LLRWYPGKLP DLDLMFDADD RPVVRSDDYT GQQNKDPPPL
201: FRYCSDDASL DIVFPDWSFW GWAEVNIKPW GESLEAIQEG NNITQWKDRV AYAYWRGNPY VDPTRGDLLK CNVSENEEWN TRLYVQDWDK ETKEGFKNSN
301: LDHQCTHRYK IYIEGWAWSV SEKYIMACDS MTLYVKPRFY DFYIRGMMPL QHYWPIRDDS KCTSLKFAVH WGNTHVDKAR EIGELGSRFI REEVNMKYVY
401: DYMFHLLNEY AKLLKFKVKI PSDAEEITPE SLGCAATERW RDFMAESMVM SPSEEFPCEM VPPYDRLALK EVIERKANLT RQVELWEDQY FNDLANKP

Best Arabidopsis Sequence Match ( AT3G61270.1 )
(BLAST)

001: MKMNNNDGQH NKTVTFPRKS IVKATVFIVV LFISAAILDL LGYLDFNAFA GLKLTTKTKE PNPYGCDFVQ NQSSQTPISQ NRKSRLNPNN SSKSSTCPSY
101: FRWIHEDLRP WKQTGITRGM IEEASRTAHF RLVIRNGKAY VKRYKKSIQT RDEFTLWGIL QLLRWYPGKL PDLELMFDAD DRPVVRSVDF IGQQKEPPPV
201: FRYCSDDASL DIVFPDWSFW GWAEVNVKPW GKSLEAIKEG NSMTQWKDRV AYAYWRGNPY VDPGRGDLLK CNATEHEEWN TRLYIQDWDK ETKEGFKNSN
301: LENQCTHRYK IYIEGWAWSV SEKYIMACDS MTLYVKPRFY DFYIRGMMPL QHYWPIRDDS KCTSLKFAVH WGNTHEDKAR EIGEVGSRFI REEVNMQYVY
401: DYMFHLLKEY ATLLKFKPEI PLDAEEITPD SMGCPATERW RDFKAESMII SPSEESPCEM LPPYDPLALK EVLERKANLT RQVELWENQY FQNLTNKP

Arabidopsis Description

Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:Q9M2D7]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.