Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69828 | Canola | mitochondrion | 66.47 | 86.2 |
| CDX71753 | Canola | endoplasmic reticulum | 82.73 | 83.91 |
| CDY48932 | Canola | endoplasmic reticulum | 82.13 | 83.3 |
| Bra007590.1-P | Field mustard | cytosol | 81.93 | 83.1 |
| CDY58789 | Canola | endoplasmic reticulum, golgi | 82.33 | 82.33 |
| CDY45704 | Canola | endoplasmic reticulum, golgi | 82.13 | 82.13 |
| Bra003444.1-P | Field mustard | endoplasmic reticulum, golgi | 81.93 | 81.93 |
| AT2G45830.1 | Thale cress | mitochondrion | 74.3 | 70.75 |
| KRH65106 | Soybean | cytosol | 22.69 | 65.32 |
| VIT_15s0046g03110.t01 | Wine grape | cytosol | 48.19 | 63.83 |
| GSMUA_Achr5P12260_001 | Banana | mitochondrion | 43.98 | 57.63 |
| VIT_15s0046g03150.t01 | Wine grape | golgi | 58.63 | 56.26 |
| KRH65107 | Soybean | cytosol | 16.87 | 54.9 |
| KRH48182 | Soybean | cytosol, golgi, plasma membrane | 55.42 | 54.12 |
| Solyc01g094380.2.1 | Tomato | cytosol, extracellular, golgi, plastid | 52.81 | 51.27 |
| PGSC0003DMT400055754 | Potato | nucleus | 15.26 | 50.0 |
| Os02t0642700-01 | Rice | plastid | 45.38 | 47.68 |
| AT3G61290.1 | Thale cress | cytosol | 43.37 | 47.47 |
| AT5G23850.1 | Thale cress | endoplasmic reticulum, mitochondrion, peroxisome, plastid | 50.0 | 45.94 |
| HORVU6Hr1G060750.4 | Barley | cytosol, peroxisome | 45.78 | 45.88 |
| TraesCS2B01G093400.1 | Wheat | golgi, mitochondrion, plastid | 45.78 | 45.42 |
| Solyc05g048800.1.1 | Tomato | cytosol | 22.09 | 45.27 |
| AT3G48980.2 | Thale cress | plastid | 48.8 | 44.59 |
| TraesCS6A01G237500.1 | Wheat | cytosol, mitochondrion | 41.16 | 43.71 |
| AT2G45840.1 | Thale cress | plasma membrane | 45.78 | 43.59 |
| TraesCS6D01G220200.2 | Wheat | cytosol, mitochondrion | 40.96 | 42.59 |
| TraesCS2D01G365600.1 | Wheat | plastid | 46.99 | 42.16 |
| Zm00001d002836_P006 | Maize | plastid | 45.58 | 41.96 |
| TraesCS2B01G386200.1 | Wheat | plastid | 46.59 | 41.95 |
| AT3G61280.1 | Thale cress | plasma membrane | 44.98 | 41.79 |
| AT1G63420.1 | Thale cress | mitochondrion | 48.39 | 41.7 |
| EES07545 | Sorghum | plastid | 46.18 | 41.67 |
| Zm00001d051287_P001 | Maize | plastid | 45.98 | 41.56 |
| TraesCS2A01G368900.2 | Wheat | plastid | 46.18 | 41.44 |
| EES11181 | Sorghum | plastid | 46.18 | 41.44 |
| TraesCSU01G025200.1 | Wheat | plastid | 46.18 | 40.85 |
| Os04t0534100-01 | Rice | mitochondrion | 35.54 | 40.41 |
| TraesCS6B01G266000.1 | Wheat | plastid | 45.98 | 37.48 |
| AT1G07220.1 | Thale cress | mitochondrion | 37.35 | 36.69 |
Protein Annotations
| MapMan:35.2 | EntrezGene:825299 | ProteinID:AEE80181.1 | ProteinID:ANM65455.1 | ArrayExpress:AT3G61270 | EnsemblPlantsGene:AT3G61270 |
| RefSeq:AT3G61270 | TAIR:AT3G61270 | RefSeq:AT3G61270-TAIR-G | EnsemblPlants:AT3G61270.1 | TAIR:AT3G61270.1 | EMBL:BT002869 |
| EMBL:BT004389 | ProteinID:CAB71057.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0006629 | GO:GO:0006664 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0012505 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0046527 | EMBL:KJ138781 |
| InterPro:LipoPS_modifying | RefSeq:NP_001327420.1 | RefSeq:NP_191686.1 | PFAM:PF05686 | PANTHER:PTHR12203 | PANTHER:PTHR12203:SF28 |
| UniProt:Q9M2D7 | SMART:SM00672 | TMHMM:TMhelix | UniParc:UPI000000BE0B | SEG:seg | : |
Description
Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:Q9M2D7]
Coordinates
chr3:+:22678034..22680509
Molecular Weight (calculated)
58526.6 Da
IEP (calculated)
7.719
GRAVY (calculated)
-0.634
Length
498 amino acids
Sequence
(BLAST)
(BLAST)
001: MKMNNNDGQH NKTVTFPRKS IVKATVFIVV LFISAAILDL LGYLDFNAFA GLKLTTKTKE PNPYGCDFVQ NQSSQTPISQ NRKSRLNPNN SSKSSTCPSY
101: FRWIHEDLRP WKQTGITRGM IEEASRTAHF RLVIRNGKAY VKRYKKSIQT RDEFTLWGIL QLLRWYPGKL PDLELMFDAD DRPVVRSVDF IGQQKEPPPV
201: FRYCSDDASL DIVFPDWSFW GWAEVNVKPW GKSLEAIKEG NSMTQWKDRV AYAYWRGNPY VDPGRGDLLK CNATEHEEWN TRLYIQDWDK ETKEGFKNSN
301: LENQCTHRYK IYIEGWAWSV SEKYIMACDS MTLYVKPRFY DFYIRGMMPL QHYWPIRDDS KCTSLKFAVH WGNTHEDKAR EIGEVGSRFI REEVNMQYVY
401: DYMFHLLKEY ATLLKFKPEI PLDAEEITPD SMGCPATERW RDFKAESMII SPSEESPCEM LPPYDPLALK EVLERKANLT RQVELWENQY FQNLTNKP
101: FRWIHEDLRP WKQTGITRGM IEEASRTAHF RLVIRNGKAY VKRYKKSIQT RDEFTLWGIL QLLRWYPGKL PDLELMFDAD DRPVVRSVDF IGQQKEPPPV
201: FRYCSDDASL DIVFPDWSFW GWAEVNVKPW GKSLEAIKEG NSMTQWKDRV AYAYWRGNPY VDPGRGDLLK CNATEHEEWN TRLYIQDWDK ETKEGFKNSN
301: LENQCTHRYK IYIEGWAWSV SEKYIMACDS MTLYVKPRFY DFYIRGMMPL QHYWPIRDDS KCTSLKFAVH WGNTHEDKAR EIGEVGSRFI REEVNMQYVY
401: DYMFHLLKEY ATLLKFKPEI PLDAEEITPD SMGCPATERW RDFKAESMII SPSEESPCEM LPPYDPLALK EVLERKANLT RQVELWENQY FQNLTNKP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.