Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- endoplasmic reticulum 2
- extracellular 1
- golgi 2
- plasma membrane 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031558.1-P | Field mustard | endoplasmic reticulum, golgi, mitochondrion | 86.59 | 86.93 |
| CDY09932 | Canola | endoplasmic reticulum, golgi | 86.19 | 86.71 |
| CDY59071 | Canola | endoplasmic reticulum, golgi, vacuole | 86.59 | 86.42 |
| Bra015563.1-P | Field mustard | mitochondrion | 85.21 | 85.71 |
| CDY06688 | Canola | mitochondrion | 85.21 | 85.71 |
| CDY10259 | Canola | mitochondrion | 85.01 | 85.69 |
| GSMUA_Achr7P06580_001 | Banana | cytosol | 40.24 | 65.18 |
| KRG98287 | Soybean | endoplasmic reticulum, golgi, vacuole | 58.58 | 64.01 |
| PGSC0003DMT400078044 | Potato | endoplasmic reticulum, golgi, mitochondrion | 58.19 | 63.71 |
| Solyc06g076980.2.1 | Tomato | unclear | 57.79 | 63.28 |
| KRH30306 | Soybean | plastid | 58.58 | 59.88 |
| VIT_06s0004g06630.t01 | Wine grape | plasma membrane | 53.85 | 58.84 |
| Os05t0149500-01 | Rice | extracellular | 30.57 | 52.36 |
| TraesCS1B01G117800.1 | Wheat | mitochondrion | 48.52 | 50.72 |
| TraesCS1A01G089800.1 | Wheat | endoplasmic reticulum, golgi, plastid | 48.32 | 50.41 |
| Zm00001d024854_P001 | Maize | mitochondrion | 47.34 | 50.0 |
| TraesCS1D01G098300.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 47.73 | 49.79 |
| EES17717 | Sorghum | mitochondrion | 48.32 | 49.3 |
| HORVU1Hr1G020420.2 | Barley | mitochondrion, plastid | 48.92 | 48.34 |
| AT3G61290.1 | Thale cress | cytosol | 35.5 | 39.56 |
| AT5G23850.1 | Thale cress | endoplasmic reticulum, mitochondrion, peroxisome, plastid | 42.01 | 39.3 |
| AT3G61270.1 | Thale cress | cytosol, golgi, plasma membrane | 36.69 | 37.35 |
| AT3G48980.2 | Thale cress | plastid | 39.65 | 36.88 |
| AT1G63420.1 | Thale cress | mitochondrion | 41.42 | 36.33 |
| AT2G45830.1 | Thale cress | mitochondrion | 37.48 | 36.33 |
| AT2G45840.1 | Thale cress | plasma membrane | 36.49 | 35.37 |
| AT3G61280.1 | Thale cress | plasma membrane | 36.88 | 34.89 |
Protein Annotations
| MapMan:35.2 | EntrezGene:837233 | ProteinID:AAF82198.1 | ProteinID:AEE28094.1 | ArrayExpress:AT1G07220 | EnsemblPlantsGene:AT1G07220 |
| RefSeq:AT1G07220 | TAIR:AT1G07220 | RefSeq:AT1G07220-TAIR-G | EnsemblPlants:AT1G07220.1 | TAIR:AT1G07220.1 | Unigene:At.48162 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0006629 | GO:GO:0006664 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0012505 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016740 | GO:GO:0046527 | EMBL:KJ139025 | InterPro:LipoPS_modifying | RefSeq:NP_172202.1 | PFAM:PF05686 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR12203 | PANTHER:PTHR12203:SF59 | UniProt:Q9LML4 | SMART:SM00672 | TMHMM:TMhelix | UniParc:UPI00000A4172 |
| SEG:seg | : | : | : | : | : |
Description
F10K1.7 protein [Source:UniProtKB/TrEMBL;Acc:Q9LML4]
Coordinates
chr1:-:2216925..2219649
Molecular Weight (calculated)
59238.1 Da
IEP (calculated)
9.193
GRAVY (calculated)
-0.503
Length
507 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLRLRLRLP HKSSPRSPSY LLLCVLALSF FSFTALLFYK VDDFIAQTKT LAGHNLEPTP WHIFPRKSFS AATKHSQAYR ILQCSYFSCP YKAVVQPKSL
101: HSESGSGRQT HQPQCPDFFR WIHRDLEPWA KTGVTKEHVK RAKANAAFRV VILSGKLYVD LYYACVQSRM MFTIWGILQL LTKYPGMVPD VDMMFDCMDK
201: PIINQTEYQS FPVPLFRYCT NEAHLDIPFP DWSFWGWSET NLRPWEEEFG DIKQGSRRRS WYNKQPRAYW KGNPDVVSPI RLELMKCNHS RLWGAQIMRQ
301: DWAEEAKGGF EQSKLSNQCN HRYKIYAEGY AWSVSLKYIL SCGSMTLIIS PEYEDFFSRG LLPKENYWPI SPTDLCRSIK YAVDWGNSNP SEAETIGKRG
401: QGYMESLSMN RVYDYMFHLI TEYSKLQKFK PEKPASANEV CAGSLLCIAE QKERELLERS RVVPSLDQPC KFPVEDRNRL EWLIQQKNKT IENVRYMEMT
501: RTQRGSK
101: HSESGSGRQT HQPQCPDFFR WIHRDLEPWA KTGVTKEHVK RAKANAAFRV VILSGKLYVD LYYACVQSRM MFTIWGILQL LTKYPGMVPD VDMMFDCMDK
201: PIINQTEYQS FPVPLFRYCT NEAHLDIPFP DWSFWGWSET NLRPWEEEFG DIKQGSRRRS WYNKQPRAYW KGNPDVVSPI RLELMKCNHS RLWGAQIMRQ
301: DWAEEAKGGF EQSKLSNQCN HRYKIYAEGY AWSVSLKYIL SCGSMTLIIS PEYEDFFSRG LLPKENYWPI SPTDLCRSIK YAVDWGNSNP SEAETIGKRG
401: QGYMESLSMN RVYDYMFHLI TEYSKLQKFK PEKPASANEV CAGSLLCIAE QKERELLERS RVVPSLDQPC KFPVEDRNRL EWLIQQKNKT IENVRYMEMT
501: RTQRGSK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.