Factsheet for HORVU1Hr1G020420.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G117800.1	Wheat	mitochondrion	91.03	96.29
TraesCS1A01G089800.1	Wheat	endoplasmic reticulum, golgi, plastid	89.67	94.65
TraesCS1D01G098300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	84.41	89.09
Zm00001d024854_P001	Maize	mitochondrion	73.68	78.75
EES17717	Sorghum	mitochondrion	75.05	77.46
Os05t0149500-01	Rice	extracellular	43.66	75.68
GSMUA_Achr7P06580_001	Banana	cytosol	37.82	61.98
KRG98287	Soybean	endoplasmic reticulum, golgi, vacuole	50.1	55.39
Solyc06g076980.2.1	Tomato	unclear	48.73	54.0
PGSC0003DMT400078044	Potato	endoplasmic reticulum, golgi, mitochondrion	48.15	53.35
VIT_06s0004g06630.t01	Wine grape	plasma membrane	46.59	51.51
KRH30306	Soybean	plastid	49.32	51.01
CDY10259	Canola	mitochondrion	49.12	50.1
Bra015563.1-P	Field mustard	mitochondrion	48.93	49.8
CDY06688	Canola	mitochondrion	48.93	49.8
Bra031558.1-P	Field mustard	endoplasmic reticulum, golgi, mitochondrion	48.34	49.11
AT1G07220.1	Thale cress	mitochondrion	48.34	48.92
CDY59071	Canola	endoplasmic reticulum, golgi, vacuole	48.34	48.82
CDY09932	Canola	endoplasmic reticulum, golgi	47.95	48.81
HORVU6Hr1G060750.4	Barley	cytosol, peroxisome	37.82	39.03
HORVU2Hr1G091800.9	Barley	cytosol	22.03	38.44
HORVU0Hr1G021480.1	Barley	cytosol, golgi, nucleus	36.84	33.45

Protein Annotations

EnsemblPlants:HORVU1Hr1G020420.2	EnsemblPlantsGene:HORVU1Hr1G020420	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:LipoPS_modifying
PANTHER:PTHR12203	PANTHER:PTHR12203:SF28	PFAM:PF05686	SEG:seg	SMART:SM00672	TMHMM:TMhelix
UniParc:UPI000B472400	UniProt:A0A287EUE1	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:80476089..80478256

Molecular Weight (calculated)

57417.6 Da

IEP (calculated)

9.029

GRAVY (calculated)

-0.354

Length

513 amino acids

Sequence
(BLAST)

001: LVTSHFLFHL HSRDVRSFRR LRPPACSMGG FTPEGGGVRA ARAGRYPPLA SLVVSTIAAF SAVIVIAVLH SAYDDALSRT RTLLGHNLEP TPWHPFPHDK
101: GRPPPRAALR CASYLSCLPP LSQPKPAAAA AANASRPRQC PSYFAAIRRD LAPWRRRDGG GGGITRALLE SARFRASMRV TITGGGTRLH VDLYYACVQS
201: RALFTVWSLL QLMRRYPGRV PDVDLMFDCM DRPAINRTEH SGDGAPPPPP LFRYCTTRDH LDIPFPDWSF WGWPETHIEP WSREFRSIKQ GSRRVKWPDR
301: VPTAYWKGNP DVASPLRLAL LACNDTNLWR AEIMRQNWEE EAKSGYQNSK LSSQCTHRYK IYAEGFAWSV SLKYILSCGS MALLIDPLYQ DFFSRGLEPR
401: VNHWPVTAAG MCESIRDAVE WGNAHPEEAE RVGKRGQRLM QELGMDTVYD YMLHLLTEYA GLLDFRPAPP RAAQEACAGS VLCLADDRQR RFLEASAASP
501: ATAEPCSMPP SDG

Best Arabidopsis Sequence Match ( AT1G07220.1 )
(BLAST)

001: MGLRLRLRLP HKSSPRSPSY LLLCVLALSF FSFTALLFYK VDDFIAQTKT LAGHNLEPTP WHIFPRKSFS AATKHSQAYR ILQCSYFSCP YKAVVQPKSL
101: HSESGSGRQT HQPQCPDFFR WIHRDLEPWA KTGVTKEHVK RAKANAAFRV VILSGKLYVD LYYACVQSRM MFTIWGILQL LTKYPGMVPD VDMMFDCMDK
201: PIINQTEYQS FPVPLFRYCT NEAHLDIPFP DWSFWGWSET NLRPWEEEFG DIKQGSRRRS WYNKQPRAYW KGNPDVVSPI RLELMKCNHS RLWGAQIMRQ
301: DWAEEAKGGF EQSKLSNQCN HRYKIYAEGY AWSVSLKYIL SCGSMTLIIS PEYEDFFSRG LLPKENYWPI SPTDLCRSIK YAVDWGNSNP SEAETIGKRG
401: QGYMESLSMN RVYDYMFHLI TEYSKLQKFK PEKPASANEV CAGSLLCIAE QKERELLERS RVVPSLDQPC KFPVEDRNRL EWLIQQKNKT IENVRYMEMT
501: RTQRGSK

Arabidopsis Description

F10K1.7 protein [Source:UniProtKB/TrEMBL;Acc:Q9LML4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.