Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- golgi 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES17717 | Sorghum | mitochondrion | 88.12 | 85.11 |
| TraesCS1B01G117800.1 | Wheat | mitochondrion | 78.12 | 77.32 |
| TraesCS1A01G089800.1 | Wheat | endoplasmic reticulum, golgi, plastid | 77.29 | 76.34 |
| HORVU1Hr1G020420.2 | Barley | mitochondrion, plastid | 78.75 | 73.68 |
| TraesCS1D01G098300.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 72.71 | 71.81 |
| Os05t0149500-01 | Rice | extracellular | 43.96 | 71.28 |
| GSMUA_Achr7P06580_001 | Banana | cytosol | 39.17 | 60.06 |
| KRG98287 | Soybean | endoplasmic reticulum, golgi, vacuole | 52.29 | 54.09 |
| Solyc06g076980.2.1 | Tomato | unclear | 50.62 | 52.48 |
| PGSC0003DMT400078044 | Potato | endoplasmic reticulum, golgi, mitochondrion | 50.42 | 52.27 |
| VIT_06s0004g06630.t01 | Wine grape | plasma membrane | 49.17 | 50.86 |
| KRH30306 | Soybean | plastid | 51.88 | 50.2 |
| CDY10259 | Canola | mitochondrion | 51.25 | 48.91 |
| Bra015563.1-P | Field mustard | mitochondrion | 51.04 | 48.61 |
| CDY06688 | Canola | mitochondrion | 51.04 | 48.61 |
| Bra031558.1-P | Field mustard | endoplasmic reticulum, golgi, mitochondrion | 50.83 | 48.32 |
| CDY59071 | Canola | endoplasmic reticulum, golgi, vacuole | 50.83 | 48.03 |
| CDY09932 | Canola | endoplasmic reticulum, golgi | 50.0 | 47.62 |
| AT1G07220.1 | Thale cress | mitochondrion | 50.0 | 47.34 |
| Zm00001d025933_P001 | Maize | mitochondrion, plastid | 41.04 | 38.78 |
| Zm00001d002836_P006 | Maize | plastid | 41.04 | 36.41 |
| Zm00001d045318_P001 | Maize | cytosol | 9.58 | 35.94 |
| Zm00001d051287_P001 | Maize | plastid | 40.42 | 35.21 |
| Zm00001d052744_P001 | Maize | cytosol | 38.33 | 30.72 |
Protein Annotations
| EMBL:BT042848 | EnsemblPlants:Zm00001d024854_P001 | EnsemblPlants:Zm00001d024854_T001 | EnsemblPlantsGene:Zm00001d024854 | EntrezGene:100285208 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | InterPro:LipoPS_modifying | PANTHER:PTHR12203 | PANTHER:PTHR12203:SF28 | PFAM:PF05686 |
| ProteinID:AQK42181.1 | SEG:seg | SMART:SM00672 | TMHMM:TMhelix | UniParc:UPI00017B800C | UniProt:B4G0G0 |
| MapMan:35.2 | : | : | : | : | : |
Description
Lipopolysaccharide-modifying protein
Coordinates
chr10:+:90669584..90671414
Molecular Weight (calculated)
54030.5 Da
IEP (calculated)
8.786
GRAVY (calculated)
-0.427
Length
480 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAEGAGGRG RAMRYPPLSA LVVSAIAAFS AVIVLAVVHS AYDDAMSRTR TLLGHNLEPT PWHPFPHDKG RPPARAALRC APSIACLPPL SSSSSSPQPQ
101: GNKKKKQKQC PAYFAAIHRD LAPWRGQGRG VTRALLDEAR RRASMRVTIT GGGRRLHVDL YYACVQSRAL FTVWSLLQLM RRYPGRVPDV DLMFDCMDRP
201: AINRTEHGDG ALPPPPLFRY CTTRDHFDIP FPDWSFWGWP ETNIEPWNHE FKNIRAGARA TRWADRVPTA YWKGNPDVAS PLREALLGCN DTALWRAEIM
301: RQNWDDEARS GYQHSRLSAQ CTHRYKIYAE GFAWSVSLKY ILSCGSMALL IEPRYQDFFS RGLEPRVNYW PVAALGMCES IRDAVDWGNA NPDEAERVGR
401: RGQRLVQDLR MHAVYDYMLH LLTEYARLLI DQDHGLSPPP HAQEACEASL LCLADDKQRR FLHASKADPA PGDPCVLPPP
101: GNKKKKQKQC PAYFAAIHRD LAPWRGQGRG VTRALLDEAR RRASMRVTIT GGGRRLHVDL YYACVQSRAL FTVWSLLQLM RRYPGRVPDV DLMFDCMDRP
201: AINRTEHGDG ALPPPPLFRY CTTRDHFDIP FPDWSFWGWP ETNIEPWNHE FKNIRAGARA TRWADRVPTA YWKGNPDVAS PLREALLGCN DTALWRAEIM
301: RQNWDDEARS GYQHSRLSAQ CTHRYKIYAE GFAWSVSLKY ILSCGSMALL IEPRYQDFFS RGLEPRVNYW PVAALGMCES IRDAVDWGNA NPDEAERVGR
401: RGQRLVQDLR MHAVYDYMLH LLTEYARLLI DQDHGLSPPP HAQEACEASL LCLADDKQRR FLHASKADPA PGDPCVLPPP
001: MGLRLRLRLP HKSSPRSPSY LLLCVLALSF FSFTALLFYK VDDFIAQTKT LAGHNLEPTP WHIFPRKSFS AATKHSQAYR ILQCSYFSCP YKAVVQPKSL
101: HSESGSGRQT HQPQCPDFFR WIHRDLEPWA KTGVTKEHVK RAKANAAFRV VILSGKLYVD LYYACVQSRM MFTIWGILQL LTKYPGMVPD VDMMFDCMDK
201: PIINQTEYQS FPVPLFRYCT NEAHLDIPFP DWSFWGWSET NLRPWEEEFG DIKQGSRRRS WYNKQPRAYW KGNPDVVSPI RLELMKCNHS RLWGAQIMRQ
301: DWAEEAKGGF EQSKLSNQCN HRYKIYAEGY AWSVSLKYIL SCGSMTLIIS PEYEDFFSRG LLPKENYWPI SPTDLCRSIK YAVDWGNSNP SEAETIGKRG
401: QGYMESLSMN RVYDYMFHLI TEYSKLQKFK PEKPASANEV CAGSLLCIAE QKERELLERS RVVPSLDQPC KFPVEDRNRL EWLIQQKNKT IENVRYMEMT
501: RTQRGSK
101: HSESGSGRQT HQPQCPDFFR WIHRDLEPWA KTGVTKEHVK RAKANAAFRV VILSGKLYVD LYYACVQSRM MFTIWGILQL LTKYPGMVPD VDMMFDCMDK
201: PIINQTEYQS FPVPLFRYCT NEAHLDIPFP DWSFWGWSET NLRPWEEEFG DIKQGSRRRS WYNKQPRAYW KGNPDVVSPI RLELMKCNHS RLWGAQIMRQ
301: DWAEEAKGGF EQSKLSNQCN HRYKIYAEGY AWSVSLKYIL SCGSMTLIIS PEYEDFFSRG LLPKENYWPI SPTDLCRSIK YAVDWGNSNP SEAETIGKRG
401: QGYMESLSMN RVYDYMFHLI TEYSKLQKFK PEKPASANEV CAGSLLCIAE QKERELLERS RVVPSLDQPC KFPVEDRNRL EWLIQQKNKT IENVRYMEMT
501: RTQRGSK
Arabidopsis Description
F10K1.7 protein [Source:UniProtKB/TrEMBL;Acc:Q9LML4]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.