Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G369000.1 | Wheat | golgi | 80.95 | 51.63 |
| TraesCS2D01G365700.1 | Wheat | golgi | 81.29 | 51.51 |
| Os04t0534000-01 | Rice | mitochondrion | 69.73 | 40.35 |
| GSMUA_Achr1P06820_001 | Banana | mitochondrion | 43.88 | 40.19 |
| GSMUA_Achr2P03920_001 | Banana | mitochondrion | 50.0 | 39.3 |
| KXG26784 | Sorghum | mitochondrion | 67.35 | 39.05 |
| Zm00001d025933_P001 | Maize | mitochondrion, plastid | 67.35 | 38.98 |
| GSMUA_Achr2P03930_001 | Banana | cytosol | 47.28 | 37.57 |
| GSMUA_Achr4P05440_001 | Banana | nucleus | 52.04 | 35.09 |
| HORVU6Hr1G060750.4 | Barley | cytosol, peroxisome | 52.72 | 31.19 |
| GSMUA_Achr4P11970_001 | Banana | golgi, nucleus, plasma membrane | 51.02 | 28.46 |
| HORVU0Hr1G021480.1 | Barley | cytosol, golgi, nucleus | 48.98 | 25.49 |
| GSMUA_Achr1P06810_001 | Banana | mitochondrion | 47.28 | 25.23 |
| GSMUA_Achr2P03940_001 | Banana | mitochondrion | 47.62 | 23.29 |
| HORVU1Hr1G020420.2 | Barley | mitochondrion, plastid | 38.44 | 22.03 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G091800.9 | EnsemblPlantsGene:HORVU2Hr1G091800 | InterPro:LipoPS_modifying | PANTHER:PTHR12203 | PANTHER:PTHR12203:SF30 | PFAM:PF05686 |
| SEG:seg | SMART:SM00672 | UniParc:UPI000B461A0F | UniProt:A0A287IXK5 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chrchr2H:+:649534582..649537574
Molecular Weight (calculated)
32178.2 Da
IEP (calculated)
9.835
GRAVY (calculated)
-0.606
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: XXXXXXXXXX XXXGHRLPGL VLLGPELNIK PWEALRREIK EANAALDWTR RAPYAYWKGN PAVAAARREL LKCNVSGKRD WNARIYAQDW RTEVRGGFRE
101: SDLAKQCTHR YKMYVEGRGW SVSEKYILAC DSVALVVRPR FHDFFSRGLV PLQHYWPVRG DRGQCRSIKF AVDWGNSHPH KAREIGENAS RFVQEELTMD
201: RVYDYMYHLL SEYARLLRYT PTVPGGAVEV TARSMARGRR GLEREFMVGT AVDAPGSAEP CELPSPFGPE ELEALRRRNA DAVSGWRRGR SGEN
101: SDLAKQCTHR YKMYVEGRGW SVSEKYILAC DSVALVVRPR FHDFFSRGLV PLQHYWPVRG DRGQCRSIKF AVDWGNSHPH KAREIGENAS RFVQEELTMD
201: RVYDYMYHLL SEYARLLRYT PTVPGGAVEV TARSMARGRR GLEREFMVGT AVDAPGSAEP CELPSPFGPE ELEALRRRNA DAVSGWRRGR SGEN
001: MLEKARRTAH FRVVILDGRV YVKKYRKSIQ TRDVFTLWGI VQLLRWYPGR LPDLELMFDP DDRPTVRSKD FQGQQHPAPP PLFRYCSDDA SLDIVFPDWS
101: FWGWAEVNIK PWDKSLVAIE EGNKMTQWKD RVAYAYWRGN PNVAPTRRDL LRCNVSAQED WNTRLYIQDW DRESREGFKN SNLENQCTHR YKIYIEGWAW
201: SVSEKYIMAC DSMTLYVRPM FYDFYVRGMM PLQHYWPIRD TSKCTSLKFA VHWGNTHLDQ ASKIGEEGSR FIREEVKMEY VYDYMFHLMN EYAKLLKFKP
301: EIPWGATEIT PDIMGCSATG RWRDFMEESM VMFPSEESPC EMPSPFNPHD LKEILERKTN LTRQVEWWED QYFHDLANIK KP
101: FWGWAEVNIK PWDKSLVAIE EGNKMTQWKD RVAYAYWRGN PNVAPTRRDL LRCNVSAQED WNTRLYIQDW DRESREGFKN SNLENQCTHR YKIYIEGWAW
201: SVSEKYIMAC DSMTLYVRPM FYDFYVRGMM PLQHYWPIRD TSKCTSLKFA VHWGNTHLDQ ASKIGEEGSR FIREEVKMEY VYDYMFHLMN EYAKLLKFKP
301: EIPWGATEIT PDIMGCSATG RWRDFMEESM VMFPSEESPC EMPSPFNPHD LKEILERKTN LTRQVEWWED QYFHDLANIK KP
Arabidopsis Description
DTA2Downstream target of AGL15 2 [Source:UniProtKB/TrEMBL;Acc:F4IH50]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.