Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G365700.1 | Wheat | golgi | 96.53 | 95.91 |
| HORVU2Hr1G091800.9 | Barley | cytosol | 51.63 | 80.95 |
| Os04t0534000-01 | Rice | mitochondrion | 77.44 | 70.28 |
| KXG26784 | Sorghum | mitochondrion | 71.8 | 65.29 |
| Zm00001d025933_P001 | Maize | mitochondrion, plastid | 70.07 | 63.58 |
| GSMUA_Achr2P03920_001 | Banana | mitochondrion | 45.99 | 56.68 |
| GSMUA_Achr2P03930_001 | Banana | cytosol | 43.6 | 54.32 |
| GSMUA_Achr4P05440_001 | Banana | nucleus | 49.67 | 52.52 |
| GSMUA_Achr1P06820_001 | Banana | mitochondrion | 35.57 | 51.09 |
| GSMUA_Achr4P11970_001 | Banana | golgi, nucleus, plasma membrane | 52.71 | 46.11 |
| TraesCS6A01G237500.1 | Wheat | cytosol, mitochondrion | 46.2 | 45.42 |
| TraesCS2A01G368900.2 | Wheat | plastid | 51.84 | 43.06 |
| TraesCS7A01G328500.1 | Wheat | cytosol | 50.11 | 40.81 |
| TraesCS7A01G328300.1 | Wheat | endoplasmic reticulum | 37.31 | 40.09 |
| GSMUA_Achr1P06810_001 | Banana | mitochondrion | 46.85 | 39.2 |
| GSMUA_Achr2P03940_001 | Banana | mitochondrion | 48.59 | 37.27 |
| TraesCS1A01G089800.1 | Wheat | endoplasmic reticulum, golgi, plastid | 38.83 | 36.83 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G369000.1 | EnsemblPlantsGene:TraesCS2A01G369000 | InterPro:LipoPS_modifying | ncoils:Coil | PANTHER:PTHR12203 | PANTHER:PTHR12203:SF30 |
| PFAM:PF05686 | SEG:seg | SMART:SM00672 | TMHMM:TMhelix | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr2A:-:612091224..612093666
Molecular Weight (calculated)
52324.4 Da
IEP (calculated)
9.659
GRAVY (calculated)
-0.355
Length
461 amino acids
Sequence
(BLAST)
(BLAST)
001: MQPPAKAGRL TRSLVVNGGV FIFIAAIVAG AFVSAYWISA SARVASIIPA GWGPLPPQQP PAPAPDAAEP ATTACPAYFR WIHEDLRPWR ATGITRETLE
101: GARRYGAKFR VTVLAGRLYV ARYGRCFQTR DVFTQWGILQ LLRRYAGRLP DLDLMFNCQD LPVVNAGDHA PPPLFRYCGS EPTLDIAFPD WSFWGWPELN
201: IKPWEALRRE ISEANAALDW TRRTPYAYWK GNPTVGAARR ELLKCNVSRE RDWNARIYAQ DWRTEVRDGF RASDLAKQCT HRYKMYVEGR GWSVSEKYIL
301: ACDSVALVVR PRFHDFFSRG LVPLRHYWPV RGQCRSIKFA VDWGNSHPGK ARVIGGNASR FVQEELTMDN VYDYMFHLLS EYARLLRYKP TVPGGAVEVT
401: VQSMARGRRG LEREFMAGTA VNVSGSAEPC ELPSPFGSEE LESLRRRKAD AARQVETWEE R
101: GARRYGAKFR VTVLAGRLYV ARYGRCFQTR DVFTQWGILQ LLRRYAGRLP DLDLMFNCQD LPVVNAGDHA PPPLFRYCGS EPTLDIAFPD WSFWGWPELN
201: IKPWEALRRE ISEANAALDW TRRTPYAYWK GNPTVGAARR ELLKCNVSRE RDWNARIYAQ DWRTEVRDGF RASDLAKQCT HRYKMYVEGR GWSVSEKYIL
301: ACDSVALVVR PRFHDFFSRG LVPLRHYWPV RGQCRSIKFA VDWGNSHPGK ARVIGGNASR FVQEELTMDN VYDYMFHLLS EYARLLRYKP TVPGGAVEVT
401: VQSMARGRRG LEREFMAGTA VNVSGSAEPC ELPSPFGSEE LESLRRRKAD AARQVETWEE R
001: MLQRKSMKRN NNNLLTNKNK YVYLKTASHP AKSIAKATLF LVTSLFISAG LLDLLGCFDF TTFTGLKQVT TSIRKSPITS QRFPNQCGVV QNQTQLFPQN
101: GSSRNNDKPR SSHSRISTCP SYFRWIHEDL RPWKETGVTR GMLEKARRTA HFRVVILDGR VYVKKYRKSI QTRDVFTLWG IVQLLRWYPG RLPDLELMFD
201: PDDRPTVRSK DFQGQQHPAP PPLFRYCSDD ASLDIVFPDW SFWGWAEVNI KPWDKSLVAI EEGNKMTQWK DRVAYAYWRG NPNVAPTRRD LLRCNVSAQE
301: DWNTRLYIQD WDRESREGFK NSNLENQCTH RYKIYIEGWA WSVSEKYIMA CDSMTLYVRP MFYDFYVRGM MPLQHYWPIR DTSKCTSLKF AVHWGNTHLD
401: QASKIGEEGS RFIREEVKME YVYDYMFHLM NEYAKLLKFK PEIPWGATEI TPDIMGCSAT GRWRDFMEES MVMFPSEESP CEMPSPFNPH DLKEILERKT
501: NLTRQVEWWE DQYFHDLANI KKP
101: GSSRNNDKPR SSHSRISTCP SYFRWIHEDL RPWKETGVTR GMLEKARRTA HFRVVILDGR VYVKKYRKSI QTRDVFTLWG IVQLLRWYPG RLPDLELMFD
201: PDDRPTVRSK DFQGQQHPAP PPLFRYCSDD ASLDIVFPDW SFWGWAEVNI KPWDKSLVAI EEGNKMTQWK DRVAYAYWRG NPNVAPTRRD LLRCNVSAQE
301: DWNTRLYIQD WDRESREGFK NSNLENQCTH RYKIYIEGWA WSVSEKYIMA CDSMTLYVRP MFYDFYVRGM MPLQHYWPIR DTSKCTSLKF AVHWGNTHLD
401: QASKIGEEGS RFIREEVKME YVYDYMFHLM NEYAKLLKFK PEIPWGATEI TPDIMGCSAT GRWRDFMEES MVMFPSEESP CEMPSPFNPH DLKEILERKT
501: NLTRQVEWWE DQYFHDLANI KKP
Arabidopsis Description
DTA2Downstream target of AGL15 2 [Source:UniProtKB/TrEMBL;Acc:F4IH50]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.