Factsheet for GSMUA_Achr1P06810_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
golgi 1
nucleus 2
cytosol 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P06820_001	Banana	mitochondrion	41.38	71.03
GSMUA_Achr2P03940_001	Banana	mitochondrion	74.05	67.89
GSMUA_Achr2P03930_001	Banana	cytosol	42.47	63.24
GSMUA_Achr2P03920_001	Banana	mitochondrion	42.47	62.57
GSMUA_Achr4P05440_001	Banana	nucleus	43.92	55.5
GSMUA_Achr4P11970_001	Banana	golgi, nucleus, plasma membrane	52.81	55.22
GSMUA_Achr5P12260_001	Banana	mitochondrion	37.21	53.95
TraesCS7D01G325300.1	Wheat	cytosol	29.58	51.75
Zm00001d045318_P001	Maize	cytosol	11.62	50.0
HORVU2Hr1G091800.9	Barley	cytosol	25.23	47.28
TraesCS2A01G369000.1	Wheat	golgi	39.2	46.85
TraesCS2D01G365700.1	Wheat	golgi	38.84	46.12
GSMUA_Achr7P06580_001	Banana	cytosol	24.68	43.45
Zm00001d025933_P001	Maize	mitochondrion, plastid	39.38	42.72
Os04t0534000-01	Rice	mitochondrion	38.84	42.13
EER87863	Sorghum	cytosol, peroxisome, vacuole	41.56	41.49
KXG26784	Sorghum	mitochondrion	37.93	41.22
TraesCS7A01G328500.1	Wheat	cytosol	41.2	40.11
HORVU0Hr1G021480.1	Barley	cytosol, golgi, nucleus	40.65	39.65
TraesCS7D01G410200.1	Wheat	cytosol, extracellular, golgi	38.11	39.03
TraesCS7B01G229100.2	Wheat	cytosol, endoplasmic reticulum, plastid	41.02	38.83
TraesCS7D01G325000.2	Wheat	cytosol	38.84	38.77
TraesCS7B01G317100.1	Wheat	endoplasmic reticulum	37.93	38.56
Os06t0152700-01	Rice	cytosol, endoplasmic reticulum, plastid	37.39	37.66
Os08t0101800-01	Rice	cytosol	39.38	37.48
TraesCS7A01G328300.1	Wheat	endoplasmic reticulum	29.04	37.3
Zm00001d052744_P001	Maize	cytosol	39.75	36.56
EES13178	Sorghum	nucleus	39.2	36.36

Protein Annotations

EnsemblPlants:GSMUA_Achr1P06810_001	EnsemblPlants:GSMUA_Achr1T06810_001	EnsemblPlantsGene:GSMUA_Achr1G06810_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:LipoPS_modifying	ncoils:Coil	PANTHER:PTHR12203	PANTHER:PTHR12203:SF59	PFAM:PF05686	SEG:seg
SMART:SM00672	TMHMM:TMhelix	UniParc:UPI000295290D	UniProt:M0RXN9	MapMan:35.2	:

Description

DTA2, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G06810_001]

Coordinates

chr1:-:5406811..5411328

Molecular Weight (calculated)

63454.3 Da

IEP (calculated)

6.779

GRAVY (calculated)

-0.553

Length

551 amino acids

Sequence
(BLAST)

001: MAMRARLGRL WDGSQVRSES SESKGRSGMA SKSSPIKLVV ALFVALLVLV FFISNSTTVN WSEQGVDSQS LKTKGEQGVD PQSLNKQNEQ GVDPKSLNKQ
101: DEQGVDPQSL NSQPSKAQSV HITLSCPNQN AAVCQRSTLA SALSLTTSQN SATCPEYFRW IHEDLRHWKS TGITKETVES AKKFATFRLV VLDGRVYVEE
201: YFGHLMARNV FTLWGILQLV NRYPGRVPDL DLMFNCMDQP AIKSAEYKSS TLPPVFHYCN NDQTSDILFP DWSFWGWPET NIKPWVPLMK EMKEANEEIK
301: WTDREPYAFW KGNPLMGRNR HELLKCNMTN EQDWNARIYT QDWKQEEKQG FQHSNLARQC SHRQVLMDRY RIYVDGLAWS VSQKYIMACN SPTLFVNTPW
401: YEFFQRGLIP GRHYWPIPEN NMCRAIKLAV DWGNEHQQEA QTMGKASSDF FQEEVKMDFV YDYMLHVLTE YAKLLRYKPT IPEKATEFCL ESIACPAPGD
501: VKKFLLDSME KSTHDAEPCK LPPPFTPEEL QQLLENKANA VKQVEMWVQN T

Best Arabidopsis Sequence Match ( AT5G23850.1 )
(BLAST)

001: MRNSPSKNGS AGGHSRTYTD TIWSPFVKSG LGISPNRSYA LVSLLILLIV GAFISTRLLL DTTVLLEKKA ATTTTTKTQT QTITPKYPRP TTVITQSPKP
101: EFTLHCSANE TTASCPSNKY PTTTSFEDDD TNHPPTATCP DYFRWIHEDL RPWSRTGITR EALERAKKTA TFRLAIVGGK IYVEKFQDAF QTRDVFTIWG
201: FLQLLRKYPG KIPDLELMFD CVDWPVVRAT EFAGANAPSP PPLFRYCGNE ETLDIVFPDW SFWGWAEVNI KPWESLLKEL REGNERTKWI NREPYAYWKG
301: NPMVAETRQD LMKCNVSEEH EWNARLYAQD WIKESKEGYK QSDLASQCHH RYKIYIEGSA WSVSEKYILA CDSVTLLVKP HYYDFFTRGL LPAHHYWPVR
401: EHDKCRSIKF AVDWGNSHIQ KAQDIGKAAS DFIQQDLKMD YVYDYMYHLL TEYSKLLQFK PEIPRNAVEI CSETMACLRS GNERKFMTES LVKQPADSGP
501: CAMPPPYDPA TYYEVVKRKQ STNMRILQWE MKYWSKQNQT GS

Arabidopsis Description

At5g23850 [Source:UniProtKB/TrEMBL;Acc:Q9FF95]
SUBAcon: [mitochondrion,endoplasmic reticulum,plastid,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.