Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 3
- extracellular 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G410200.1 | Wheat | cytosol, extracellular, golgi | 92.44 | 93.12 |
| TraesCS7A01G328300.1 | Wheat | endoplasmic reticulum | 56.27 | 71.1 |
| TraesCS7B01G229100.2 | Wheat | cytosol, endoplasmic reticulum, plastid | 63.47 | 59.11 |
| GSMUA_Achr2P03930_001 | Banana | cytosol | 36.9 | 54.05 |
| EES13178 | Sorghum | nucleus | 57.75 | 52.69 |
| GSMUA_Achr2P03920_001 | Banana | mitochondrion | 35.98 | 52.14 |
| Os08t0101800-01 | Rice | cytosol | 54.06 | 50.6 |
| Zm00001d052744_P001 | Maize | cytosol | 55.35 | 50.08 |
| GSMUA_Achr1P06820_001 | Banana | mitochondrion | 29.52 | 49.84 |
| GSMUA_Achr4P05440_001 | Banana | nucleus | 37.45 | 46.56 |
| GSMUA_Achr4P11970_001 | Banana | golgi, nucleus, plasma membrane | 41.88 | 43.07 |
| TraesCS2B01G093400.1 | Wheat | golgi, mitochondrion, plastid | 38.75 | 41.83 |
| GSMUA_Achr1P06810_001 | Banana | mitochondrion | 38.56 | 37.93 |
| TraesCS2B01G386200.1 | Wheat | plastid | 38.38 | 37.61 |
| GSMUA_Achr2P03940_001 | Banana | mitochondrion | 40.59 | 36.61 |
| TraesCS6B01G266000.1 | Wheat | plastid | 40.41 | 35.84 |
| TraesCS1B01G117800.1 | Wheat | mitochondrion | 31.0 | 34.64 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G317100.1 | EnsemblPlantsGene:TraesCS7B01G317100 | InterPro:LipoPS_modifying | PANTHER:PTHR12203 | PANTHER:PTHR12203:SF31 | PFAM:PF05686 |
| SEG:seg | SMART:SM00672 | TMHMM:TMhelix | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr7B:+:567541597..567547802
Molecular Weight (calculated)
61775.6 Da
IEP (calculated)
7.625
GRAVY (calculated)
-0.418
Length
542 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLVLCVTSW MKGCSPAADE ERAAMVPLPS PAGDEIVDKD LAAMHTKRCW TATARGGVGV AMAIFVLLAL LLQTKWINLD AAYYTFSPAG TGFSQHGRGH
101: SYTAPLIPIP LSCSNDTDTS SSTTAPPPAP SSSSNKRRYY PGVPPPLCPD YFRHIHTDME PWRATGIARD AVERAQPHAQ FRLVVLSGRA YVEKYRDSFQ
201: TRDVFTQWGI LQLLARYPGR VPDVDIMFST LDSPRVLAAD YPSRSAAPPL FRYCKEESRE LAILFPDWSF WGWPEVNVRP WAPLMEELVR ENARLPWPER
301: EPYAFWKGNP DVSEVRQDLF RCNNDTAAGK EWNARLFKQD WDAAGRNGFR DSDLTKQCRY RYKIYVQGHT WSVSEKYILA CDSPMLAIDT PFRDFFSRGL
401: VAGKHYWLID PANKCRAVKF AVDWGNAHPA QARRMGEEGS GFTREEMGMD YVYEYMLNVL RQYSALLRYT PTVPERAVEV SLESMACPRR GREREFMMES
501: REKCVAVDEP CTLPPPFTVD QVREMAVRDE QVRSKLLQMV RH
101: SYTAPLIPIP LSCSNDTDTS SSTTAPPPAP SSSSNKRRYY PGVPPPLCPD YFRHIHTDME PWRATGIARD AVERAQPHAQ FRLVVLSGRA YVEKYRDSFQ
201: TRDVFTQWGI LQLLARYPGR VPDVDIMFST LDSPRVLAAD YPSRSAAPPL FRYCKEESRE LAILFPDWSF WGWPEVNVRP WAPLMEELVR ENARLPWPER
301: EPYAFWKGNP DVSEVRQDLF RCNNDTAAGK EWNARLFKQD WDAAGRNGFR DSDLTKQCRY RYKIYVQGHT WSVSEKYILA CDSPMLAIDT PFRDFFSRGL
401: VAGKHYWLID PANKCRAVKF AVDWGNAHPA QARRMGEEGS GFTREEMGMD YVYEYMLNVL RQYSALLRYT PTVPERAVEV SLESMACPRR GREREFMMES
501: REKCVAVDEP CTLPPPFTVD QVREMAVRDE QVRSKLLQMV RH
001: MLQRKSMKRN NNNLLTNKNK YVYLKTASHP AKSIAKATLF LVTSLFISAG LLDLLGCFDF TTFTGLKQVT TSIRKSPITS QRFPNQCGVV QNQTQLFPQN
101: GSSRNNDKPR SSHSRISTCP SYFRWIHEDL RPWKETGVTR GMLEKARRTA HFRVVILDGR VYVKKYRKSI QTRDVFTLWG IVQLLRWYPG RLPDLELMFD
201: PDDRPTVRSK DFQGQQHPAP PPLFRYCSDD ASLDIVFPDW SFWGWAEVNI KPWDKSLVAI EEGNKMTQWK DRVAYAYWRG NPNVAPTRRD LLRCNVSAQE
301: DWNTRLYIQD WDRESREGFK NSNLENQCTH RYKIYIEGWA WSVSEKYIMA CDSMTLYVRP MFYDFYVRGM MPLQHYWPIR DTSKCTSLKF AVHWGNTHLD
401: QASKIGEEGS RFIREEVKME YVYDYMFHLM NEYAKLLKFK PEIPWGATEI TPDIMGCSAT GRWRDFMEES MVMFPSEESP CEMPSPFNPH DLKEILERKT
501: NLTRQVEWWE DQYFHDLANI KKP
101: GSSRNNDKPR SSHSRISTCP SYFRWIHEDL RPWKETGVTR GMLEKARRTA HFRVVILDGR VYVKKYRKSI QTRDVFTLWG IVQLLRWYPG RLPDLELMFD
201: PDDRPTVRSK DFQGQQHPAP PPLFRYCSDD ASLDIVFPDW SFWGWAEVNI KPWDKSLVAI EEGNKMTQWK DRVAYAYWRG NPNVAPTRRD LLRCNVSAQE
301: DWNTRLYIQD WDRESREGFK NSNLENQCTH RYKIYIEGWA WSVSEKYIMA CDSMTLYVRP MFYDFYVRGM MPLQHYWPIR DTSKCTSLKF AVHWGNTHLD
401: QASKIGEEGS RFIREEVKME YVYDYMFHLM NEYAKLLKFK PEIPWGATEI TPDIMGCSAT GRWRDFMEES MVMFPSEESP CEMPSPFNPH DLKEILERKT
501: NLTRQVEWWE DQYFHDLANI KKP
Arabidopsis Description
DTA2Downstream target of AGL15 2 [Source:UniProtKB/TrEMBL;Acc:F4IH50]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.