Factsheet for TraesCS2B01G386200.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
endoplasmic reticulum 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G365600.1	Wheat	plastid	94.39	94.05
TraesCS2A01G368900.2	Wheat	plastid	92.22	91.89
Os04t0534100-01	Rice	mitochondrion	59.13	74.66
Zm00001d002836_P006	Maize	plastid	72.88	74.49
EES11181	Sorghum	plastid	73.96	73.69
TraesCS2B01G093400.1	Wheat	golgi, mitochondrion, plastid	61.3	67.53
GSMUA_Achr5P12260_001	Banana	mitochondrion	46.29	67.37
VIT_16s0050g00190.t01	Wine grape	nucleus	34.0	67.14
VIT_02s0025g03710.t01	Wine grape	cytosol	30.38	61.76
KRH08971	Soybean	cytosol	26.22	60.67
TraesCS6B01G266000.1	Wheat	plastid	66.0	59.74
VIT_16s0050g00160.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	53.89	59.72
VIT_15s0046g03110.t01	Wine grape	cytosol	39.6	58.24
KRH65106	Soybean	cytosol	17.9	57.23
PGSC0003DMT400000701	Potato	mitochondrion	7.96	57.14
KRH09038	Soybean	cytosol	27.67	56.67
VIT_15s0046g03120.t01	Wine grape	cytosol	43.22	55.45
VIT_15s0046g03080.t01	Wine grape	cytosol	41.77	54.61
VIT_15s0046g03140.t01	Wine grape	cytosol	22.78	54.08
KRH09051	Soybean	cytosol, nucleus, plasma membrane	26.4	54.07
KRH08981	Soybean	plastid	37.07	53.95
VIT_15s0046g03050.t01	Wine grape	cytosol	41.23	53.9
CDY69828	Canola	mitochondrion	37.25	53.65
PGSC0003DMT400037089	Potato	endoplasmic reticulum, golgi, vacuole	49.73	53.5
Solyc03g025760.2.1	Tomato	endoplasmic reticulum, golgi	49.01	52.72
Solyc03g025780.2.1	Tomato	golgi	48.1	52.47
Solyc03g025770.2.1	Tomato	endoplasmic reticulum, golgi, vacuole	46.84	52.01
KRH09010	Soybean	cytosol, peroxisome, plasma membrane	48.82	51.43
VIT_15s0046g03100.t01	Wine grape	mitochondrion	11.75	50.78
KRH09011	Soybean	cytosol	48.46	50.19
AT5G23850.1	Thale cress	endoplasmic reticulum, mitochondrion, peroxisome, plastid	49.19	50.18
Bra009709.1-P	Field mustard	plastid	48.1	49.81
Solyc01g094390.2.1	Tomato	endoplasmic reticulum, golgi, vacuole	42.5	49.79
KRH08953	Soybean	cytosol, extracellular, nucleus	13.02	49.66
VIT_15s0046g03150.t01	Wine grape	golgi	46.47	49.52
CDX88050	Canola	plastid	47.74	49.44
CDX80388	Canola	plastid	47.56	49.16
KRH65107	Soybean	cytosol	13.56	49.02
Bra007592.1-P	Field mustard	cytosol	29.48	48.66
Bra018021.1-P	Field mustard	golgi	47.2	48.33
CDX71752	Canola	cytosol	37.43	48.14
Bra007591.1-P	Field mustard	cytosol	37.43	48.14
CDY48932	Canola	endoplasmic reticulum	42.68	48.07
CDY08097	Canola	plastid	47.38	47.9
CDX71753	Canola	endoplasmic reticulum	42.5	47.86
Bra007590.1-P	Field mustard	cytosol	42.5	47.86
VIT_15s0046g03070.t01	Wine grape	golgi	45.39	47.81
CDY45704	Canola	endoplasmic reticulum, golgi	43.04	47.79
VIT_15s0046g03130.t01	Wine grape	cytosol	19.17	47.75
CDY05887	Canola	golgi	47.2	47.71
AT3G48980.2	Thale cress	plastid	47.02	47.71
KRH48182	Soybean	cytosol, golgi, plasma membrane	43.76	47.45
KRG88606	Soybean	cytosol	18.44	47.44
CDY58789	Canola	endoplasmic reticulum, golgi	42.68	47.39
KRH65090	Soybean	extracellular	40.69	47.27
Bra003444.1-P	Field mustard	endoplasmic reticulum, golgi	42.5	47.19
KRG88612	Soybean	cytosol	23.87	47.14
KRH77521	Soybean	endoplasmic reticulum, nucleus, plasma membrane, plastid	44.48	47.13
KRH08960	Soybean	plastid	17.72	46.89
AT3G61270.1	Thale cress	cytosol, golgi, plasma membrane	41.95	46.59
CDY37069	Canola	golgi	43.76	46.27
AT2G45830.1	Thale cress	mitochondrion	43.4	45.89
CDY18897	Canola	golgi, mitochondrion, plastid, vacuole	42.13	45.6
KRH40487	Soybean	cytosol	28.57	45.53
CDY27355	Canola	golgi, mitochondrion, nucleus, plasma membrane, plastid	43.4	45.45
KRH38478	Soybean	cytosol	48.1	45.32
AT3G61290.1	Thale cress	cytosol	37.07	45.05
KRH65092	Soybean	endoplasmic reticulum, plasma membrane, vacuole	39.6	43.8
KRH48168	Soybean	plasma membrane	39.24	43.66
VIT_15s0046g03090.t01	Wine grape	cytoskeleton, golgi, nucleus	42.13	43.39
AT1G63420.1	Thale cress	mitochondrion	45.21	43.25
Bra027639.1-P	Field mustard	mitochondrion	45.03	43.08
CDY25494	Canola	mitochondrion	45.03	43.01
PGSC0003DMT400055754	Potato	nucleus	11.75	42.76
Solyc01g094380.2.1	Tomato	cytosol, extracellular, golgi, plastid	39.6	42.69
CDX89107	Canola	mitochondrion	34.9	42.14
VIT_15s0046g03060.t01	Wine grape	cytosol	9.04	42.02
CDX71750	Canola	plasma membrane	39.24	41.73
KRH00707	Soybean	cytosol	27.49	41.53
Bra039310.1-P	Field mustard	golgi, mitochondrion	32.37	41.44
AT2G45840.1	Thale cress	plasma membrane	39.06	41.3
TraesCS1B01G117800.1	Wheat	mitochondrion	35.8	40.82
CDX71749	Canola	cytosol, golgi, plasma membrane	32.01	40.78
CDY18896	Canola	golgi, plasma membrane, plastid	28.93	40.61
Bra007593.1-P	Field mustard	endoplasmic reticulum, nucleus, plasma membrane	38.52	40.19
CDY48930	Canola	plasma membrane	38.52	40.19
AT3G61280.1	Thale cress	plasma membrane	38.88	40.11
KRG88496	Soybean	cytosol	12.66	40.0
Solyc05g048800.1.1	Tomato	cytosol	17.54	39.92
TraesCS7B01G317100.1	Wheat	endoplasmic reticulum	37.61	38.38
TraesCS7B01G229100.2	Wheat	cytosol, endoplasmic reticulum, plastid	40.33	38.32
VIT_02s0025g03720.t01	Wine grape	endoplasmic reticulum, extracellular, plasma membrane	15.01	37.56
KRH09043	Soybean	cytosol, golgi, mitochondrion, plastid	12.12	36.81
CDY48931	Canola	plasma membrane	21.7	36.59
Bra004942.1-P	Field mustard	mitochondrion, peroxisome, plasma membrane, plastid	40.14	34.8
CDX74769	Canola	mitochondrion, peroxisome, plasma membrane, plastid	39.78	34.48
PGSC0003DMT400000098	Potato	cytosol	42.68	27.22
CDY42493	Canola	cytosol	34.9	22.31

Protein Annotations

EnsemblPlants:TraesCS2B01G386200.1	EnsemblPlantsGene:TraesCS2B01G386200	InterPro:LipoPS_modifying	ncoils:Coil	PANTHER:PTHR12203	PANTHER:PTHR12203:SF33
PFAM:PF05686	SEG:seg	SMART:SM00672	TMHMM:TMhelix	MapMan:35.2	:

Description

No Description!

Coordinates

chr2B:-:549306250..549311936

Molecular Weight (calculated)

62547.6 Da

IEP (calculated)

9.475

GRAVY (calculated)

-0.331

Length

553 amino acids

Sequence
(BLAST)

001: MAMAVAAAGA VEGQRSSKLV AALSRTSAAF LFFSVVVVGA VAVSTRWITT TTTLQVSFPT AAAIPAAAAV LHPETQHPNP SPQSTSTPPR PPPAAYSISC
101: PTPPVRRNIS HTTKASKSSQ TLALALSSSS SCRSAPDLLP ATATAARSPS YSSCPSYFRF IHEDLRPWRA AGGVTRAMLA RARATASFRL VVLNGRAFVQ
201: RFRPAFQTRD LFTIWGILQL LRRYPGRVPD LDLMFDCVDW PVVRTHLYRG EHALFMPPLF RYCGDDRTLD IVFPDWSFWG WPEINIKPWD ALHKDLKDGN
301: SKVRWFSREP YAYWKGNAAV ATSRQELVKC NVSSTQDWNA RIYTQDWFKE SKEGYKTSNL ESQCTHRYKI YIEGSAWSIS QKYILACDSM TLLVTPKYYD
401: FFSRSLMPLQ HYWPVRNENK CASIQYAVDW GNSHKQLAQR IGKEASDFVQ QEVNMDHVYD YMLHLLTEYA KLLKFKPTKP PEAVEVCPES LVCQAEGTEK
501: KFLMESMVKS AYDSGPCDLP PPFNPQELTM LKQRKENSIR QVEMWERRAS TTR

Best Arabidopsis Sequence Match ( AT2G45830.1 )
(BLAST)

001: MLQRKSMKRN NNNLLTNKNK YVYLKTASHP AKSIAKATLF LVTSLFISAG LLDLLGCFDF TTFTGLKQVT TSIRKSPITS QRFPNQCGVV QNQTQLFPQN
101: GSSRNNDKPR SSHSRISTCP SYFRWIHEDL RPWKETGVTR GMLEKARRTA HFRVVILDGR VYVKKYRKSI QTRDVFTLWG IVQLLRWYPG RLPDLELMFD
201: PDDRPTVRSK DFQGQQHPAP PPLFRYCSDD ASLDIVFPDW SFWGWAEVNI KPWDKSLVAI EEGNKMTQWK DRVAYAYWRG NPNVAPTRRD LLRCNVSAQE
301: DWNTRLYIQD WDRESREGFK NSNLENQCTH RYKIYIEGWA WSVSEKYIMA CDSMTLYVRP MFYDFYVRGM MPLQHYWPIR DTSKCTSLKF AVHWGNTHLD
401: QASKIGEEGS RFIREEVKME YVYDYMFHLM NEYAKLLKFK PEIPWGATEI TPDIMGCSAT GRWRDFMEES MVMFPSEESP CEMPSPFNPH DLKEILERKT
501: NLTRQVEWWE DQYFHDLANI KKP

Arabidopsis Description

DTA2Downstream target of AGL15 2 [Source:UniProtKB/TrEMBL;Acc:F4IH50]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.