CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plasma membrane 1
plastid 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH09011	Soybean	cytosol	79.9	87.83
KRH08971	Soybean	cytosol	35.09	86.19
KRH09038	Soybean	cytosol	38.16	82.96
KRH09010	Soybean	cytosol, peroxisome, plasma membrane	72.91	81.52
KRH08981	Soybean	plastid	51.62	79.74
KRH09051	Soybean	cytosol, nucleus, plasma membrane	36.29	78.89
KRH08953	Soybean	cytosol, extracellular, nucleus	19.25	77.93
KRH08960	Soybean	plastid	27.26	76.56
KRG88606	Soybean	cytosol	27.26	74.42
VIT_16s0050g00190.t01	Wine grape	nucleus	34.24	71.79
KRG88612	Soybean	cytosol	32.37	67.86
GSMUA_Achr5P12260_001	Banana	mitochondrion	43.44	67.11
VIT_16s0050g00160.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	56.9	66.93
KRH65106	Soybean	cytosol	18.4	62.43
PGSC0003DMT400037089	Potato	endoplasmic reticulum, golgi, vacuole	53.32	60.89
AT5G23850.1	Thale cress	endoplasmic reticulum, mitochondrion, peroxisome, plastid	56.22	60.89
CDX88050	Canola	plastid	55.2	60.67
Bra009709.1-P	Field mustard	plastid	54.86	60.3
CDX80388	Canola	plastid	54.86	60.19
Solyc03g025760.2.1	Tomato	endoplasmic reticulum, golgi	52.13	59.53
Bra018021.1-P	Field mustard	golgi	54.17	58.89
AT3G48980.2	Thale cress	plastid	54.34	58.53
CDY08097	Canola	plastid	54.34	58.32
CDY05887	Canola	golgi	54.34	58.32
KRG88496	Soybean	cytosol	17.21	57.71
KRH09043	Soybean	cytosol, golgi, mitochondrion, plastid	17.55	56.59
Solyc03g025770.2.1	Tomato	endoplasmic reticulum, golgi, vacuole	47.36	55.82
Os02t0642700-01	Rice	plastid	44.12	54.64
HORVU6Hr1G060750.4	Barley	cytosol, peroxisome	45.14	53.32
KRH48182	Soybean	cytosol, golgi, plasma membrane	46.0	52.94
TraesCS2B01G093400.1	Wheat	golgi, mitochondrion, plastid	44.8	52.39
KRH65107	Soybean	cytosol	13.46	51.63
KRH77521	Soybean	endoplasmic reticulum, nucleus, plasma membrane, plastid	45.66	51.34
TraesCS6A01G237500.1	Wheat	cytosol, mitochondrion	40.2	50.32
KRH65090	Soybean	extracellular	40.72	50.21
KRH40487	Soybean	cytosol	29.64	50.14
Zm00001d051287_P001	Maize	plastid	46.85	49.91
TraesCS6D01G220200.2	Wheat	cytosol, mitochondrion	40.37	49.48
EES07545	Sorghum	plastid	46.51	49.46
Zm00001d002836_P006	Maize	plastid	45.32	49.17
KRH48168	Soybean	plasma membrane	41.57	49.09
TraesCSU01G025200.1	Wheat	plastid	47.02	49.02
EES11181	Sorghum	plastid	46.17	48.83
TraesCS2D01G365600.1	Wheat	plastid	45.83	48.47
TraesCS2B01G386200.1	Wheat	plastid	45.32	48.1
Os04t0534100-01	Rice	mitochondrion	35.6	47.72
TraesCS2A01G368900.2	Wheat	plastid	44.63	47.21
KRH65092	Soybean	endoplasmic reticulum, plasma membrane, vacuole	40.03	47.0
TraesCS6B01G266000.1	Wheat	plastid	48.21	46.32
KRH00707	Soybean	cytosol	28.62	45.9
KRG98287	Soybean	endoplasmic reticulum, golgi, vacuole	31.18	39.44
KRH30306	Soybean	plastid	30.66	36.29

Protein Annotations

MapMan:35.2	EMBL:ACUP02005818	EnsemblPlantsGene:GLYMA_09G138300	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005623	GO:GO:0006629	GO:GO:0006664	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0012505	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0046527	UniProt:K7LDT0
EnsemblPlants:KRH38478	ProteinID:KRH38478	ProteinID:KRH38478.1	InterPro:LipoPS_modifying	PFAM:PF05686	PANTHER:PTHR12203
PANTHER:PTHR12203:SF59	SMART:SM00672	TMHMM:TMhelix	UniParc:UPI0002954615	:	:

Description

hypothetical protein

Coordinates

chr9:-:34373444..34384563

Molecular Weight (calculated)

67933.8 Da

IEP (calculated)

8.332

GRAVY (calculated)

-0.568

Length

587 amino acids

Sequence
(BLAST)

001: MRKNNEVQEV VVITPRQEEI QGSGGHIRNS KDGIWWPVTK TLPRSTAVLL FPVVLIIAAL AYTRTLDTHR SLTVTVELYR HRMTDPKTGK NSLDPLQFTR
101: GTSHRPILSF SGRTHYCMLF FGFPRNWRVT QENNPSDKRP TSKRTSSPPI EIPLNCSAYN LTGTCPTNQS PIPENDQSRP SSATCPEYFR WIHEDLRPWA
201: RTGITQEMVE RAKQTANFKL VILKGKAYLE TYEKAYQTRD VFSIWGILQL LRRYPGKIPD LELMFDCVDW PVLLVDRYNG PNTEQPPPLF RYCGNDATLD
301: IVFPDWSFWG WAEVNIKPWE ILLGELKEGT KRIPWLNREP YAYWKGNPVV AETRLDLMKC NVSENQDWNA RLYAQDWGRE SQEGYKKSDL ASQCTHRYKV
401: YIEGSAWSVS EKYILACDSP TLLVKPHYYD FFTRGLIPGH HYWPIKEDDK CRSIKFAVDW GNSHKQRAHQ IGKAASDFIQ EEVKMDYVYD YMFHLLNSYA
501: KLFRYKPSLS ANATEICAES MVCGAEGPVK KFMMESLVKV PANTDPCSMP APYDPPTLHA QLKRKESSIQ QVDSWEKSYW ENQTITS

Best Arabidopsis Sequence Match ( AT5G23850.1 )
(BLAST)

001: MRNSPSKNGS AGGHSRTYTD TIWSPFVKSG LGISPNRSYA LVSLLILLIV GAFISTRLLL DTTVLLEKKA ATTTTTKTQT QTITPKYPRP TTVITQSPKP
101: EFTLHCSANE TTASCPSNKY PTTTSFEDDD TNHPPTATCP DYFRWIHEDL RPWSRTGITR EALERAKKTA TFRLAIVGGK IYVEKFQDAF QTRDVFTIWG
201: FLQLLRKYPG KIPDLELMFD CVDWPVVRAT EFAGANAPSP PPLFRYCGNE ETLDIVFPDW SFWGWAEVNI KPWESLLKEL REGNERTKWI NREPYAYWKG
301: NPMVAETRQD LMKCNVSEEH EWNARLYAQD WIKESKEGYK QSDLASQCHH RYKIYIEGSA WSVSEKYILA CDSVTLLVKP HYYDFFTRGL LPAHHYWPVR
401: EHDKCRSIKF AVDWGNSHIQ KAQDIGKAAS DFIQQDLKMD YVYDYMYHLL TEYSKLLQFK PEIPRNAVEI CSETMACLRS GNERKFMTES LVKQPADSGP
501: CAMPPPYDPA TYYEVVKRKQ STNMRILQWE MKYWSKQNQT GS

Arabidopsis Description

At5g23850 [Source:UniProtKB/TrEMBL;Acc:Q9FF95]
SUBAcon: [mitochondrion,endoplasmic reticulum,plastid,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.