CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plasma membrane 1
plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH08971	Soybean	cytosol	38.95	87.03
KRH08960	Soybean	plastid	33.52	85.65
KRH09010	Soybean	cytosol, peroxisome, plasma membrane	83.33	84.76
KRH09038	Soybean	cytosol	42.51	84.07
KRH08981	Soybean	plastid	59.74	83.95
KRH09051	Soybean	cytosol, nucleus, plasma membrane	40.45	80.0
KRH38478	Soybean	cytosol	87.83	79.9
KRH08953	Soybean	cytosol, extracellular, nucleus	21.16	77.93
KRG88606	Soybean	cytosol	30.52	75.81
VIT_16s0050g00190.t01	Wine grape	nucleus	38.2	72.86
KRG88612	Soybean	cytosol	35.77	68.21
VIT_16s0050g00160.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	63.11	67.54
GSMUA_Achr5P12260_001	Banana	mitochondrion	47.38	66.58
KRH65106	Soybean	cytosol	20.04	61.85
AT5G23850.1	Thale cress	endoplasmic reticulum, mitochondrion, peroxisome, plastid	61.8	60.89
CDX88050	Canola	plastid	60.49	60.49
Bra009709.1-P	Field mustard	plastid	60.3	60.3
CDX80388	Canola	plastid	60.11	60.0
PGSC0003DMT400037089	Potato	endoplasmic reticulum, golgi, vacuole	57.49	59.73
KRG88496	Soybean	cytosol	19.48	59.43
Bra018021.1-P	Field mustard	golgi	59.36	58.7
Solyc03g025760.2.1	Tomato	endoplasmic reticulum, golgi	56.18	58.37
CDY08097	Canola	plastid	59.55	58.14
CDY05887	Canola	golgi	59.55	58.14
AT3G48980.2	Thale cress	plastid	59.18	57.98
KRH09043	Soybean	cytosol, golgi, mitochondrion, plastid	19.66	57.69
Solyc03g025770.2.1	Tomato	endoplasmic reticulum, golgi, vacuole	52.43	56.22
Os02t0642700-01	Rice	plastid	49.06	55.27
HORVU6Hr1G060750.4	Barley	cytosol, peroxisome	50.0	53.72
TraesCS2B01G093400.1	Wheat	golgi, mitochondrion, plastid	49.44	52.59
KRH48182	Soybean	cytosol, golgi, plasma membrane	50.0	52.35
KRH65107	Soybean	cytosol	14.98	52.29
KRH77521	Soybean	endoplasmic reticulum, nucleus, plasma membrane, plastid	50.37	51.53
TraesCS6A01G237500.1	Wheat	cytosol, mitochondrion	44.94	51.17
KRH40487	Soybean	cytosol	32.96	50.72
KRH65090	Soybean	extracellular	44.94	50.42
TraesCS6D01G220200.2	Wheat	cytosol, mitochondrion	45.13	50.31
Zm00001d051287_P001	Maize	plastid	51.5	49.91
EES07545	Sorghum	plastid	51.31	49.64
Zm00001d002836_P006	Maize	plastid	50.0	49.35
KRH48168	Soybean	plasma membrane	45.32	48.69
TraesCSU01G025200.1	Wheat	plastid	51.31	48.67
TraesCS2D01G365600.1	Wheat	plastid	50.56	48.65
EES11181	Sorghum	plastid	50.56	48.65
TraesCS2B01G386200.1	Wheat	plastid	50.19	48.46
TraesCS2A01G368900.2	Wheat	plastid	49.44	47.57
KRH65092	Soybean	endoplasmic reticulum, plasma membrane, vacuole	44.38	47.4
Os04t0534100-01	Rice	mitochondrion	38.58	47.03
KRH00707	Soybean	cytosol	31.65	46.17
TraesCS6B01G266000.1	Wheat	plastid	52.81	46.15
KRG98287	Soybean	endoplasmic reticulum, golgi, vacuole	34.83	40.09
KRH30306	Soybean	plastid	34.27	36.9

Protein Annotations

EntrezGene:100800365	MapMan:35.2	EMBL:ACUP02010263	EnsemblPlantsGene:GLYMA_16G189000	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005623	GO:GO:0006629	GO:GO:0006664	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0012505	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0046527
UniProt:K7MIC4	EnsemblPlants:KRH09011	ProteinID:KRH09011	ProteinID:KRH09011.1	ProteinID:KRH09012.1	ProteinID:KRH09013.1
InterPro:LipoPS_modifying	PFAM:PF05686	PANTHER:PTHR12203	PANTHER:PTHR12203:SF59	SMART:SM00672	TMHMM:TMhelix
UniParc:UPI00023D6C60	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr16:-:35160485..35167548

Molecular Weight (calculated)

61576.9 Da

IEP (calculated)

6.570

GRAVY (calculated)

-0.479

Length

534 amino acids

Sequence
(BLAST)

001: MRENNNEVVI TAGEEENHVS GGHLRHSRDG IWWSVAKSLP RSTAVLIFPV MLIIGALTYT RTLDTHPLFS GASSTKSALS TTPYNTGPFT VSIRKPIEIP
101: LNCTAYNLTR TCSTNQFPIP ENDQSHPSSA TCPEYFRWIH EDLRPWARTG ITQDMVERAK ETANFKLVIL KGKAYLETYE KAYQTRDVFS IWGILQLLRR
201: YPGKIPDLEL MFDCVDWPVV LSDRYNGPNV EQPPPLFRYC GNDATLDIVF PDWSFWGWAE VNIKPWEILL TELKEGTKRI PWLNREPYAY WKGNPVVAET
301: RQDLMKCNVS ENQDWNARLY VQDWGRESQE GYKNSDLASQ CTHRYKVYIE GSAWSVSEKY ILACDSPTLL VKPHYYDFFT RGLIPVHHYW PIKEDDKCRS
401: IKFAVDWGNS HKQRAHQIGK AASDFIQEEL KMDYVYDYMF HLLNSYAKLF RYKPSISANA TEICVESMVC GAEGPVKKFM MESLVKVPAN TDPCTMPAPF
501: DPPSLNAQLQ RKESSIQQVD SWEKSYWENQ TITS

Best Arabidopsis Sequence Match ( AT5G23850.1 )
(BLAST)

001: MRNSPSKNGS AGGHSRTYTD TIWSPFVKSG LGISPNRSYA LVSLLILLIV GAFISTRLLL DTTVLLEKKA ATTTTTKTQT QTITPKYPRP TTVITQSPKP
101: EFTLHCSANE TTASCPSNKY PTTTSFEDDD TNHPPTATCP DYFRWIHEDL RPWSRTGITR EALERAKKTA TFRLAIVGGK IYVEKFQDAF QTRDVFTIWG
201: FLQLLRKYPG KIPDLELMFD CVDWPVVRAT EFAGANAPSP PPLFRYCGNE ETLDIVFPDW SFWGWAEVNI KPWESLLKEL REGNERTKWI NREPYAYWKG
301: NPMVAETRQD LMKCNVSEEH EWNARLYAQD WIKESKEGYK QSDLASQCHH RYKIYIEGSA WSVSEKYILA CDSVTLLVKP HYYDFFTRGL LPAHHYWPVR
401: EHDKCRSIKF AVDWGNSHIQ KAQDIGKAAS DFIQQDLKMD YVYDYMYHLL TEYSKLLQFK PEIPRNAVEI CSETMACLRS GNERKFMTES LVKQPADSGP
501: CAMPPPYDPA TYYEVVKRKQ STNMRILQWE MKYWSKQNQT GS

Arabidopsis Description

At5g23850 [Source:UniProtKB/TrEMBL;Acc:Q9FF95]
SUBAcon: [mitochondrion,endoplasmic reticulum,plastid,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.