Factsheet for PGSC0003DMT400037089

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 6
plasma membrane 5
golgi 6
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g025760.2.1	Tomato	endoplasmic reticulum, golgi	95.14	95.14
VIT_16s0050g00190.t01	Wine grape	nucleus	40.27	73.93
VIT_16s0050g00160.t01	Wine grape	endoplasmic reticulum, golgi, vacuole	66.54	68.54
GSMUA_Achr5P12260_001	Banana	mitochondrion	50.0	67.63
KRH08971	Soybean	cytosol	29.96	64.44
KRH09038	Soybean	cytosol	31.71	60.37
PGSC0003DMT400000701	Potato	mitochondrion	8.95	59.74
KRH08981	Soybean	plastid	43.77	59.21
KRH09011	Soybean	cytosol	59.73	57.49
KRH09051	Soybean	cytosol, nucleus, plasma membrane	29.96	57.04
Os02t0642700-01	Rice	plastid	52.14	56.54
KRH09010	Soybean	cytosol, peroxisome, plasma membrane	57.2	56.0
HORVU6Hr1G060750.4	Barley	cytosol, peroxisome	53.31	55.13
AT5G23850.1	Thale cress	endoplasmic reticulum, mitochondrion, peroxisome, plastid	57.59	54.61
KRH08960	Soybean	plastid	22.18	54.55
KRH08953	Soybean	cytosol, extracellular, nucleus	15.37	54.48
CDX88050	Canola	plastid	56.23	54.12
Bra009709.1-P	Field mustard	plastid	56.03	53.93
CDX80388	Canola	plastid	55.64	53.46
KRH38478	Soybean	cytosol	60.89	53.32
TraesCS6A01G237500.1	Wheat	cytosol, mitochondrion	48.44	53.09
AT3G48980.2	Thale cress	plastid	56.03	52.84
TraesCS2B01G093400.1	Wheat	golgi, mitochondrion, plastid	51.36	52.59
TraesCS6D01G220200.2	Wheat	cytosol, mitochondrion	48.64	52.19
Bra018021.1-P	Field mustard	golgi	54.67	52.04
PGSC0003DMT400055754	Potato	nucleus	15.37	51.97
KRG88606	Soybean	cytosol	21.6	51.63
CDY08097	Canola	plastid	54.86	51.55
CDY05887	Canola	golgi	54.47	51.19
Zm00001d002836_P006	Maize	plastid	53.5	50.83
EES11181	Sorghum	plastid	54.47	50.45
TraesCS2D01G365600.1	Wheat	plastid	54.09	50.09
Zm00001d051287_P001	Maize	plastid	53.5	49.91
TraesCS2B01G386200.1	Wheat	plastid	53.5	49.73
EES07545	Sorghum	plastid	53.11	49.46
TraesCS2A01G368900.2	Wheat	plastid	53.31	49.37
KRG88612	Soybean	cytosol	26.85	49.29
TraesCSU01G025200.1	Wheat	plastid	53.5	48.85
Os04t0534100-01	Rice	mitochondrion	39.69	46.58
TraesCS6B01G266000.1	Wheat	plastid	54.67	45.99
PGSC0003DMT400078044	Potato	endoplasmic reticulum, golgi, mitochondrion	39.3	43.63
KRG88496	Soybean	cytosol	13.42	39.43
KRH09043	Soybean	cytosol, golgi, mitochondrion, plastid	13.42	37.91
PGSC0003DMT400000098	Potato	cytosol	51.17	30.33

Protein Annotations

EnsemblPlants:PGSC0003DMT400037089	EnsemblPlantsGene:PGSC0003DMG400014295	EntrezGene:102594681	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:LipoPS_modifying	PANTHER:PTHR12203	PANTHER:PTHR12203:SF59	PFAM:PF05686	PGSC:PGSC0003DMG400014295	RefSeq:XP_006353301.2
SEG:seg	SMART:SM00672	TMHMM:TMhelix	UniParc:UPI000294F991	UniProt:M1B4S8	MapMan:35.2

Description

KDEL motif-containing protein 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400014295]

Coordinates

chr3:+:43004464..43009428

Molecular Weight (calculated)

59874.5 Da

IEP (calculated)

8.771

GRAVY (calculated)

-0.561

Length

514 amino acids

Sequence
(BLAST)

001: MATKTTALRS SLTLFASLLL FIGAIFSTHF LYSPFDNSTT GYSPRKTILT PVTRHNHTDA TPAVPLKKLE IQLNCTLGNL TRTCPASYYP LKFTEQNEAS
101: TSSPPPPTCP DYFRWIYDDL WHWRETGITK EMVMRAKRTA DFRLVIVNGR AYVETYHKAF QSRDTFTLWG ILQMLRRYPG KLPDLDLMFD CVDWPVLKTE
201: FYRHPKAPAP PPLFRYCGND SSLDIVFPDW SFWGWPEINI KPWETLSKDL KKGNEKMKWT DREPYAYWKG NPVVAETRRD LLKCNVSEKQ DWNARVYAQD
301: WGQEEKQGYK KSDLASQCIH RYKIYVEGSA WSVSEKYILA CDSVTLLIKP QYYDFYTRGL MPLQHYWPVK DKDKCRSIKH AVDWGNTHEQ EAQAIGKAAS
401: DFIQEQLKMD YVYDYMFHLL SEYAKLLKYK PTVPRKAVEL CSEAMACPAE GLTKKFMLES MVEGPSDAIP CNMPPPFAPA GLHSILDRKE NSIKQVDSWE
501: QQYWKNKSKQ QRRF

Best Arabidopsis Sequence Match ( AT5G23850.1 )
(BLAST)

001: MRNSPSKNGS AGGHSRTYTD TIWSPFVKSG LGISPNRSYA LVSLLILLIV GAFISTRLLL DTTVLLEKKA ATTTTTKTQT QTITPKYPRP TTVITQSPKP
101: EFTLHCSANE TTASCPSNKY PTTTSFEDDD TNHPPTATCP DYFRWIHEDL RPWSRTGITR EALERAKKTA TFRLAIVGGK IYVEKFQDAF QTRDVFTIWG
201: FLQLLRKYPG KIPDLELMFD CVDWPVVRAT EFAGANAPSP PPLFRYCGNE ETLDIVFPDW SFWGWAEVNI KPWESLLKEL REGNERTKWI NREPYAYWKG
301: NPMVAETRQD LMKCNVSEEH EWNARLYAQD WIKESKEGYK QSDLASQCHH RYKIYIEGSA WSVSEKYILA CDSVTLLVKP HYYDFFTRGL LPAHHYWPVR
401: EHDKCRSIKF AVDWGNSHIQ KAQDIGKAAS DFIQQDLKMD YVYDYMYHLL TEYSKLLQFK PEIPRNAVEI CSETMACLRS GNERKFMTES LVKQPADSGP
501: CAMPPPYDPA TYYEVVKRKQ STNMRILQWE MKYWSKQNQT GS

Arabidopsis Description

At5g23850 [Source:UniProtKB/TrEMBL;Acc:Q9FF95]
SUBAcon: [mitochondrion,endoplasmic reticulum,plastid,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.