Factsheet for Solyc03g025780.2.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 2
mitochondrion 2
golgi 4
cytosol 2
extracellular 2
plasma membrane 2
endoplasmic reticulum 2
vacuole 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	cytosol, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P12260_001	Banana	mitochondrion	50.69	67.63
Solyc03g025760.2.1	Tomato	endoplasmic reticulum, golgi	57.99	57.2
Solyc03g025770.2.1	Tomato	endoplasmic reticulum, golgi, vacuole	55.62	56.63
Os02t0642700-01	Rice	plastid	52.47	56.12
HORVU6Hr1G060750.4	Barley	cytosol, peroxisome	52.66	53.72
TraesCS2B01G093400.1	Wheat	golgi, mitochondrion, plastid	52.86	53.39
Solyc01g094390.2.1	Tomato	endoplasmic reticulum, golgi, vacuole	49.51	53.18
TraesCS6A01G237500.1	Wheat	cytosol, mitochondrion	47.93	51.81
TraesCS6D01G220200.2	Wheat	cytosol, mitochondrion	47.93	50.73
Zm00001d002836_P006	Maize	plastid	52.27	48.98
Zm00001d051287_P001	Maize	plastid	52.86	48.64
EES07545	Sorghum	plastid	52.66	48.37
TraesCSU01G025200.1	Wheat	plastid	53.65	48.31
Solyc01g094380.2.1	Tomato	cytosol, extracellular, golgi, plastid	48.72	48.15
TraesCS2B01G386200.1	Wheat	plastid	52.47	48.1
EES11181	Sorghum	plastid	52.47	47.93
TraesCS2D01G365600.1	Wheat	plastid	52.47	47.93
TraesCS2A01G368900.2	Wheat	plastid	52.27	47.75
Os04t0534100-01	Rice	mitochondrion	39.84	46.12
TraesCS6B01G266000.1	Wheat	plastid	53.65	44.52
Solyc05g048800.1.1	Tomato	cytosol	21.3	44.44
Solyc06g076980.2.1	Tomato	unclear	37.28	40.82

Protein Annotations

MapMan:35.2	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0006629	GO:GO:0006664	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0012505
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0046527	UniProt:K4BF51	InterPro:LipoPS_modifying
PFAM:PF05686	PANTHER:PTHR12203	PANTHER:PTHR12203:SF59	SMART:SM00672	EnsemblPlantsGene:Solyc03g025780.2	EnsemblPlants:Solyc03g025780.2.1
TMHMM:TMhelix	UniParc:UPI0002768E91	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3:-:3170370..3174154

Molecular Weight (calculated)

60003.6 Da

IEP (calculated)

7.951

GRAVY (calculated)

-0.556

Length

507 amino acids

Sequence
(BLAST)

001: MEIGYQRVGN QRRSIESFLL PCYINKPFAK YFLLFFIFLL LIGSYLWTTL LDTNSNELQS RRGKFPLNCS SGNNTRTCPV NYYPADYKFV NDNPSSSSPN
101: CPHYFHWIHE DLKPWRETGI TEEMVERANR TANFRLVILN GRAYVETYEK GFQTRDVFTL WGILQLLRRY PGKIPDLDMM FDCVDWPVVR SSDFAGENAV
201: APPPLFRYCG DNETLDIVFP DWSFWGWAEI NIKPWQDLLK DLDKGNRMQR WQNRAPYAYW KGNPEVAEKR MELVKCNVTE NQEWNARIYV QDWKEEIKQG
301: FKHSDLGNQC HHRYKIYIEG SAWSVSEKYI LACDSVSLLV TPHYYDFFSR SLLPLVHYWP INEDDKCASI KFAVDWGNKY KKKVQRIGRE ASDFIQEDLK
401: MDYVYDYMFH LLNEYAKLLR YKPKVPKSAS ELCSEIMACP AEGTEKKLMM ESMVNWPIDD SPCKMPIPFD KLSLDSYYKR KQNSIKEVRT LERDYLREQR
501: VKTKILG

Best Arabidopsis Sequence Match ( AT5G23850.1 )
(BLAST)

001: MRNSPSKNGS AGGHSRTYTD TIWSPFVKSG LGISPNRSYA LVSLLILLIV GAFISTRLLL DTTVLLEKKA ATTTTTKTQT QTITPKYPRP TTVITQSPKP
101: EFTLHCSANE TTASCPSNKY PTTTSFEDDD TNHPPTATCP DYFRWIHEDL RPWSRTGITR EALERAKKTA TFRLAIVGGK IYVEKFQDAF QTRDVFTIWG
201: FLQLLRKYPG KIPDLELMFD CVDWPVVRAT EFAGANAPSP PPLFRYCGNE ETLDIVFPDW SFWGWAEVNI KPWESLLKEL REGNERTKWI NREPYAYWKG
301: NPMVAETRQD LMKCNVSEEH EWNARLYAQD WIKESKEGYK QSDLASQCHH RYKIYIEGSA WSVSEKYILA CDSVTLLVKP HYYDFFTRGL LPAHHYWPVR
401: EHDKCRSIKF AVDWGNSHIQ KAQDIGKAAS DFIQQDLKMD YVYDYMYHLL TEYSKLLQFK PEIPRNAVEI CSETMACLRS GNERKFMTES LVKQPADSGP
501: CAMPPPYDPA TYYEVVKRKQ STNMRILQWE MKYWSKQNQT GS

Arabidopsis Description

At5g23850 [Source:UniProtKB/TrEMBL;Acc:Q9FF95]
SUBAcon: [plastid,endoplasmic reticulum,peroxisome,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.