Factsheet for Solyc01g094390.2.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, endoplasmic reticulum, vacuole

Predictor Summary:

plastid 2
extracellular 3
golgi 4
plasma membrane 3
endoplasmic reticulum 4
vacuole 4
cytosol 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, vacuole
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol, nucleus, plastid
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_15s0046g03080.t01	Wine grape	cytosol	51.06	56.97
VIT_15s0046g03050.t01	Wine grape	cytosol	50.85	56.74
VIT_15s0046g03120.t01	Wine grape	cytosol	51.06	55.92
GSMUA_Achr5P12260_001	Banana	mitochondrion	44.49	55.26
Solyc03g025760.2.1	Tomato	endoplasmic reticulum, golgi	55.3	50.78
PGSC0003DMT400000098	Potato	cytosol	91.74	49.94
Solyc03g025770.2.1	Tomato	endoplasmic reticulum, golgi, vacuole	52.33	49.6
Solyc03g025780.2.1	Tomato	golgi	53.18	49.51
Os02t0642700-01	Rice	plastid	49.58	49.37
VIT_15s0046g03070.t01	Wine grape	golgi	52.75	47.43
HORVU6Hr1G060750.4	Barley	cytosol, peroxisome	48.73	46.28
TraesCS2B01G093400.1	Wheat	golgi, mitochondrion, plastid	48.94	46.02
TraesCS6A01G237500.1	Wheat	cytosol, mitochondrion	43.64	43.92
TraesCS6D01G220200.2	Wheat	cytosol, mitochondrion	44.07	43.42
Solyc01g094380.2.1	Tomato	cytosol, extracellular, golgi, plastid	47.03	43.27
VIT_15s0046g03090.t01	Wine grape	cytoskeleton, golgi, nucleus	49.15	43.2
TraesCS2B01G386200.1	Wheat	plastid	49.79	42.5
Zm00001d051287_P001	Maize	plastid	49.58	42.47
EES07545	Sorghum	plastid	49.58	42.39
TraesCS2D01G365600.1	Wheat	plastid	49.79	42.34
TraesCSU01G025200.1	Wheat	plastid	50.42	42.27
TraesCS2A01G368900.2	Wheat	plastid	49.36	41.98
Zm00001d002836_P006	Maize	plastid	47.67	41.59
EES11181	Sorghum	plastid	48.52	41.26
Os04t0534100-01	Rice	mitochondrion	37.71	40.64
Solyc05g048800.1.1	Tomato	cytosol	20.34	39.51
Solyc06g076980.2.1	Tomato	unclear	37.5	38.23
TraesCS6B01G266000.1	Wheat	plastid	49.36	38.13

Protein Annotations

MapMan:35.2	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0006629	GO:GO:0006664	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0012505
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0046527	UniProt:K4AZI0	InterPro:LipoPS_modifying
PFAM:PF05686	PANTHER:PTHR12203	PANTHER:PTHR12203:SF59	SMART:SM00672	EnsemblPlantsGene:Solyc01g094390.2	EnsemblPlants:Solyc01g094390.2.1
TMHMM:TMhelix	UniParc:UPI0002768972	:	:	:	:

Description

No Description!

Coordinates

chr1:+:85898960..85901034

Molecular Weight (calculated)

55122.4 Da

IEP (calculated)

9.347

GRAVY (calculated)

-0.436

Length

472 amino acids

Sequence
(BLAST)

001: MFTRQRITSS IKTTIGFCII LLSILALTIQ WMNISVETGS LEKSNKVNIF PEVSCSIKCP RVSPRKPKFM SSSESCPEYF RWIHEDLRPW KETGITRKMV
101: EKAREVAHFR VVVVNGRVYF EKYKATFQKR DIVTLWGILQ LLSFYPGMLP DLDLVFECGD QPVTQRSDYG KSKESVPPPL FHYCGNRSSF DIVFPDWSFW
201: GWPELSIRPW DKLEKDLQHS NEMIKWTERE PYAYWKGNAV LGEARRDLMK CNVSGKQDWN ARIYGLQWAL ERKQGYKTSD LAAQCTHRYK IYVEGLAWSV
301: SQKYILACDS VALLINPHYY DFYTRSLLPT VHYWPINEKD KCKSIKFAVD WGNKNAKKAQ EIGKTGSKFV HEELQMKYIY DYMFHLLTEY SKLLKYKPTI
401: PKDAVEVCSD TLICSTKGIR KKFRVHSRIN NVSSSEPCTM PPSWSPADLQ NFIDRKQNLT KQVELWEAAQ SI

Best Arabidopsis Sequence Match ( AT5G23850.1 )
(BLAST)

001: MRNSPSKNGS AGGHSRTYTD TIWSPFVKSG LGISPNRSYA LVSLLILLIV GAFISTRLLL DTTVLLEKKA ATTTTTKTQT QTITPKYPRP TTVITQSPKP
101: EFTLHCSANE TTASCPSNKY PTTTSFEDDD TNHPPTATCP DYFRWIHEDL RPWSRTGITR EALERAKKTA TFRLAIVGGK IYVEKFQDAF QTRDVFTIWG
201: FLQLLRKYPG KIPDLELMFD CVDWPVVRAT EFAGANAPSP PPLFRYCGNE ETLDIVFPDW SFWGWAEVNI KPWESLLKEL REGNERTKWI NREPYAYWKG
301: NPMVAETRQD LMKCNVSEEH EWNARLYAQD WIKESKEGYK QSDLASQCHH RYKIYIEGSA WSVSEKYILA CDSVTLLVKP HYYDFFTRGL LPAHHYWPVR
401: EHDKCRSIKF AVDWGNSHIQ KAQDIGKAAS DFIQQDLKMD YVYDYMYHLL TEYSKLLQFK PEIPRNAVEI CSETMACLRS GNERKFMTES LVKQPADSGP
501: CAMPPPYDPA TYYEVVKRKQ STNMRILQWE MKYWSKQNQT GS

Arabidopsis Description

At5g23850 [Source:UniProtKB/TrEMBL;Acc:Q9FF95]
SUBAcon: [plastid,endoplasmic reticulum,peroxisome,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.