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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, cytoskeleton, nucleus

Predictor Summary:
  • nucleus 2
  • golgi 2
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • cytoskeleton 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_15s0046g03080.t01 Wine grape cytosol 49.16 62.41
VIT_15s0046g03050.t01 Wine grape cytosol 48.6 61.7
VIT_15s0046g03120.t01 Wine grape cytosol 48.6 60.56
VIT_16s0050g00190.t01 Wine grape nucleus 30.91 59.29
GSMUA_Achr5P12260_001 Banana mitochondrion 41.71 58.95
VIT_02s0025g03710.t01 Wine grape cytosol 29.61 58.46
VIT_15s0046g03140.t01 Wine grape cytosol 24.02 55.36
VIT_15s0046g03070.t01 Wine grape golgi 52.51 53.71
VIT_15s0046g03110.t01 Wine grape cytosol 37.24 53.19
VIT_15s0046g03100.t01 Wine grape mitochondrion 12.66 53.12
VIT_16s0050g00160.t01 Wine grape endoplasmic reticulum, golgi, vacuole 48.23 51.9
Solyc01g094390.2.1 Tomato endoplasmic reticulum, golgi, vacuole 43.2 49.15
Os02t0642700-01 Rice plastid 43.02 48.73
VIT_15s0046g03150.t01 Wine grape golgi 46.0 47.59
VIT_15s0046g03130.t01 Wine grape cytosol 19.55 47.3
TraesCS2B01G093400.1 Wheat golgi, mitochondrion, plastid 43.76 46.81
HORVU6Hr1G060750.4 Barley cytosol, peroxisome 42.27 45.67
TraesCS6A01G237500.1 Wheat cytosol, mitochondrion 39.66 45.42
TraesCS6D01G220200.2 Wheat cytosol, mitochondrion 39.85 44.68
VIT_15s0046g03060.t01 Wine grape cytosol 9.87 44.54
Zm00001d002836_P006 Maize plastid 43.76 43.44
Os04t0534100-01 Rice mitochondrion 35.38 43.38
EES07545 Sorghum plastid 44.32 43.12
EES11181 Sorghum plastid 44.51 43.06
Zm00001d051287_P001 Maize plastid 44.13 43.01
TraesCSU01G025200.1 Wheat plastid 44.69 42.63
VIT_02s0025g03720.t01 Wine grape endoplasmic reticulum, extracellular, plasma membrane 17.5 42.53
TraesCS2D01G365600.1 Wheat plastid 43.58 42.16
TraesCS2B01G386200.1 Wheat plastid 43.39 42.13
TraesCS2A01G368900.2 Wheat plastid 42.83 41.44
TraesCS6B01G266000.1 Wheat plastid 44.13 38.79
VIT_06s0004g06630.t01 Wine grape plasma membrane 31.28 36.21
PGSC0003DMT400000098 Potato cytosol 43.58 26.99
Protein Annotations
EntrezGene:100263719wikigene:100263719MapMan:35.2ProteinID:CCB62396ProteinID:CCB62396.1ncoils:Coil
UniProt:F6I600EMBL:FN596755GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005623
GO:GO:0006629GO:GO:0006664GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0012505
GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0046527EntrezGene:LOC100263719wikigene:LOC100263719
InterPro:LipoPS_modifyingPFAM:PF05686PANTHER:PTHR12203PANTHER:PTHR12203:SF59SMART:SM00672TIGR:TC54368
TMHMM:TMhelixUniParc:UPI000210AB51ArrayExpress:VIT_15s0046g03090EnsemblPlantsGene:VIT_15s0046g03090EnsemblPlants:VIT_15s0046g03090.t01unigene:Vvi.2935
RefSeq:XP_002271353RefSeq:XP_002271353.2RefSeq:XP_010661757.1SEG:seg::
Description
No Description!
Coordinates
chr15:-:19702407..19708708
Molecular Weight (calculated)
61442.8 Da
IEP (calculated)
7.490
GRAVY (calculated)
-0.593
Length
537 amino acids
Sequence
(BLAST)
001: MAASKADYEA VAHEELQKEE EGGGGGGGGG GEQEESVDEG GVEHGFWSHG SKLLSDLPES VGRQFKRGAS TTVPLFFVLL FIGAFFFIRW FDVSLFSGTS
101: LEKAFSTFQT TEENCTKENT TCSTKQHPLS GNACPDYFRW IYEDLRPWAE TGITQEMMEA AKDPAFFRLV ILDGKVYMEK YKGAFQTRDV FTIWGILQLL
201: KLYPGKVPDL ELMFECGDRP RIKATDYGGR KGKKKVPPLF HYCASDDTLD IVFPDWSFWG WPEINIKPWN SLRKELEEGN NRTKWMDREP YAYWKGNIRT
301: SGNRQALFKC RPSNNHDWNA RVYDMDWGRE SHEGFKDSNL ASQCTHKYKI YMEGIAWSVS EKYILACDSM SLVPRSRYYD FFTRSLQPTI HYWPIQQNDI
401: CRSVKYAVDW GNKHPQKAQK IGKAASNFVL EELKMNYVYD YMFHLLSEYA KLFKYKPTVP PGAIEIVPET MANTGGDLEK IYKNESSVKG PATTSPCTMP
501: PPYDPKALKA FLKRKDKVTR KVEKLEASGN LNKDISP
Best Arabidopsis Sequence Match ( AT5G23850.1 )
(BLAST)
001: MRNSPSKNGS AGGHSRTYTD TIWSPFVKSG LGISPNRSYA LVSLLILLIV GAFISTRLLL DTTVLLEKKA ATTTTTKTQT QTITPKYPRP TTVITQSPKP
101: EFTLHCSANE TTASCPSNKY PTTTSFEDDD TNHPPTATCP DYFRWIHEDL RPWSRTGITR EALERAKKTA TFRLAIVGGK IYVEKFQDAF QTRDVFTIWG
201: FLQLLRKYPG KIPDLELMFD CVDWPVVRAT EFAGANAPSP PPLFRYCGNE ETLDIVFPDW SFWGWAEVNI KPWESLLKEL REGNERTKWI NREPYAYWKG
301: NPMVAETRQD LMKCNVSEEH EWNARLYAQD WIKESKEGYK QSDLASQCHH RYKIYIEGSA WSVSEKYILA CDSVTLLVKP HYYDFFTRGL LPAHHYWPVR
401: EHDKCRSIKF AVDWGNSHIQ KAQDIGKAAS DFIQQDLKMD YVYDYMYHLL TEYSKLLQFK PEIPRNAVEI CSETMACLRS GNERKFMTES LVKQPADSGP
501: CAMPPPYDPA TYYEVVKRKQ STNMRILQWE MKYWSKQNQT GS
Arabidopsis Description
At5g23850 [Source:UniProtKB/TrEMBL;Acc:Q9FF95]
SUBAcon: [mitochondrion,endoplasmic reticulum,plastid,peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.