Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- golgi 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_15s0046g03110.t01 | Wine grape | cytosol | 68.98 | 95.21 |
| KRH65106 | Soybean | cytosol | 23.51 | 70.52 |
| VIT_02s0025g03710.t01 | Wine grape | cytosol | 35.07 | 66.91 |
| KRH65107 | Soybean | cytosol | 19.46 | 66.01 |
| CDY69828 | Canola | mitochondrion | 47.78 | 64.58 |
| VIT_15s0046g03140.t01 | Wine grape | cytosol | 28.71 | 63.95 |
| KRH48182 | Soybean | cytosol, golgi, plasma membrane | 62.43 | 63.53 |
| GSMUA_Achr5P12260_001 | Banana | mitochondrion | 46.44 | 63.42 |
| VIT_16s0050g00190.t01 | Wine grape | nucleus | 33.91 | 62.86 |
| Solyc01g094380.2.1 | Tomato | cytosol, extracellular, golgi, plastid | 59.92 | 60.62 |
| VIT_15s0046g03100.t01 | Wine grape | mitochondrion | 14.84 | 60.16 |
| PGSC0003DMT400055754 | Potato | nucleus | 17.53 | 59.87 |
| VIT_16s0050g00160.t01 | Wine grape | endoplasmic reticulum, golgi, vacuole | 56.84 | 59.12 |
| VIT_15s0046g03130.t01 | Wine grape | cytosol | 25.24 | 59.01 |
| AT3G61270.1 | Thale cress | cytosol, golgi, plasma membrane | 56.26 | 58.63 |
| CDY58789 | Canola | endoplasmic reticulum, golgi | 56.26 | 58.63 |
| CDX71753 | Canola | endoplasmic reticulum | 55.3 | 58.45 |
| Bra003444.1-P | Field mustard | endoplasmic reticulum, golgi | 56.07 | 58.43 |
| CDY48932 | Canola | endoplasmic reticulum | 55.11 | 58.25 |
| Bra007590.1-P | Field mustard | cytosol | 54.91 | 58.04 |
| CDY45704 | Canola | endoplasmic reticulum, golgi | 55.49 | 57.83 |
| AT2G45830.1 | Thale cress | mitochondrion | 57.61 | 57.17 |
| CDY37069 | Canola | golgi | 57.23 | 56.79 |
| VIT_15s0046g03080.t01 | Wine grape | cytosol | 46.24 | 56.74 |
| CDY27355 | Canola | golgi, mitochondrion, nucleus, plasma membrane, plastid | 57.03 | 56.06 |
| CDY18897 | Canola | golgi, mitochondrion, plastid, vacuole | 54.72 | 55.58 |
| VIT_15s0046g03050.t01 | Wine grape | cytosol | 45.09 | 55.32 |
| VIT_15s0046g03120.t01 | Wine grape | cytosol | 45.66 | 54.99 |
| Solyc05g048800.1.1 | Tomato | cytosol | 25.63 | 54.73 |
| VIT_02s0025g03720.t01 | Wine grape | endoplasmic reticulum, extracellular, plasma membrane | 23.12 | 54.3 |
| Os02t0642700-01 | Rice | plastid | 49.52 | 54.22 |
| Bra039310.1-P | Field mustard | golgi, mitochondrion | 44.12 | 53.01 |
| HORVU6Hr1G060750.4 | Barley | cytosol, peroxisome | 50.1 | 52.31 |
| TraesCS2B01G093400.1 | Wheat | golgi, mitochondrion, plastid | 49.9 | 51.59 |
| VIT_15s0046g03070.t01 | Wine grape | golgi | 50.29 | 49.71 |
| TraesCS6A01G237500.1 | Wheat | cytosol, mitochondrion | 43.93 | 48.61 |
| Zm00001d002836_P006 | Maize | plastid | 50.48 | 48.43 |
| TraesCS6D01G220200.2 | Wheat | cytosol, mitochondrion | 44.32 | 48.02 |
| Zm00001d051287_P001 | Maize | plastid | 50.87 | 47.91 |
| EES07545 | Sorghum | plastid | 50.48 | 47.46 |
| TraesCSU01G025200.1 | Wheat | plastid | 51.45 | 47.42 |
| EES11181 | Sorghum | plastid | 50.67 | 47.39 |
| TraesCS2D01G365600.1 | Wheat | plastid | 49.9 | 46.67 |
| TraesCS2A01G368900.2 | Wheat | plastid | 49.71 | 46.49 |
| TraesCS2B01G386200.1 | Wheat | plastid | 49.52 | 46.47 |
| VIT_15s0046g03090.t01 | Wine grape | cytoskeleton, golgi, nucleus | 47.59 | 46.0 |
| Os04t0534100-01 | Rice | mitochondrion | 38.15 | 45.21 |
| TraesCS6B01G266000.1 | Wheat | plastid | 51.64 | 43.86 |
| CDX74769 | Canola | mitochondrion, peroxisome, plasma membrane, plastid | 52.79 | 42.95 |
| Bra004942.1-P | Field mustard | mitochondrion, peroxisome, plasma membrane, plastid | 52.41 | 42.63 |
| VIT_15s0046g03060.t01 | Wine grape | cytosol | 9.63 | 42.02 |
| VIT_06s0004g06630.t01 | Wine grape | plasma membrane | 35.65 | 39.87 |
Protein Annotations
| EntrezGene:100243078 | wikigene:100243078 | MapMan:35.2 | ProteinID:CCB62391 | ProteinID:CCB62391.1 | ncoils:Coil |
| UniProt:F6I5Z5 | EMBL:FN596755 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 |
| GO:GO:0004000 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0006139 | GO:GO:0006396 |
| GO:GO:0006629 | GO:GO:0006664 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0012505 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016787 | GO:GO:0046527 | EntrezGene:LOC100243078 |
| wikigene:LOC100243078 | InterPro:LipoPS_modifying | PFAM:PF05686 | PANTHER:PTHR12203 | PANTHER:PTHR12203:SF28 | SMART:SM00672 |
| TMHMM:TMhelix | UniParc:UPI000210AB4D | ArrayExpress:VIT_15s0046g03150 | EnsemblPlantsGene:VIT_15s0046g03150 | EnsemblPlants:VIT_15s0046g03150.t01 | RefSeq:XP_002273091 |
| RefSeq:XP_002273091.2 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr15:-:19747879..19751398
Molecular Weight (calculated)
60963.6 Da
IEP (calculated)
8.706
GRAVY (calculated)
-0.612
Length
519 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKNTENWSY IFWHGAGPHR HFPGSLKRGG ATSITTTVLF FVFLFIFVGA LVYTGWIDAS IFPGDPSQKS LLSFTKAPIR LEYPLNCSAG NLTKTCPGNY
101: PTKHNPTNPD HSSTNMTCPD YFRWIHQDLL PWKQTGITRD MVDRAQRTAH FRLVIIDGKA YVEKFRKSIQ TRDMFTLWGI LQLLRWYPGR LPDLELMFDC
201: DDRPVVRMRD FRGPNAAPPP LFRYCGDDWS LDIVFPDWSF WGWAETNIKP WRNVLKDIKE GNRRTKWKDR VPLAYWRGNP HVAPTRGDLL KCNVSDKADW
301: NTRLYLQDWG QQSKIGYRQS NLEDQCTHRY KIYIEGWAWS VSEKYILACD SMTLLIRPRY HDFFIRGLVP LQHYWPIRDN NKCRDLRFAV EWGNNHTDKA
401: QTMGETTSKF IQEDLKMDYV YDYMFHLLNE YAKLLKFKPT IPPGAVEVCA ETMACPAEGA WRKFMEESLE KNPTDTTPCS LPPPYDPPGF HDFIERKANA
501: TRQVELWENE YWDKQNKKQ
101: PTKHNPTNPD HSSTNMTCPD YFRWIHQDLL PWKQTGITRD MVDRAQRTAH FRLVIIDGKA YVEKFRKSIQ TRDMFTLWGI LQLLRWYPGR LPDLELMFDC
201: DDRPVVRMRD FRGPNAAPPP LFRYCGDDWS LDIVFPDWSF WGWAETNIKP WRNVLKDIKE GNRRTKWKDR VPLAYWRGNP HVAPTRGDLL KCNVSDKADW
301: NTRLYLQDWG QQSKIGYRQS NLEDQCTHRY KIYIEGWAWS VSEKYILACD SMTLLIRPRY HDFFIRGLVP LQHYWPIRDN NKCRDLRFAV EWGNNHTDKA
401: QTMGETTSKF IQEDLKMDYV YDYMFHLLNE YAKLLKFKPT IPPGAVEVCA ETMACPAEGA WRKFMEESLE KNPTDTTPCS LPPPYDPPGF HDFIERKANA
501: TRQVELWENE YWDKQNKKQ
001: MLQRKSMKRN NNNLLTNKNK YVYLKTASHP AKSIAKATLF LVTSLFISAG LLDLLGCFDF TTFTGLKQVT TSIRKSPITS QRFPNQCGVV QNQTQLFPQN
101: GSSRNNDKPR SSHSRISTCP SYFRWIHEDL RPWKETGVTR GMLEKARRTA HFRVVILDGR VYVKKYRKSI QTRDVFTLWG IVQLLRWYPG RLPDLELMFD
201: PDDRPTVRSK DFQGQQHPAP PPLFRYCSDD ASLDIVFPDW SFWGWAEVNI KPWDKSLVAI EEGNKMTQWK DRVAYAYWRG NPNVAPTRRD LLRCNVSAQE
301: DWNTRLYIQD WDRESREGFK NSNLENQCTH RYKIYIEGWA WSVSEKYIMA CDSMTLYVRP MFYDFYVRGM MPLQHYWPIR DTSKCTSLKF AVHWGNTHLD
401: QASKIGEEGS RFIREEVKME YVYDYMFHLM NEYAKLLKFK PEIPWGATEI TPDIMGCSAT GRWRDFMEES MVMFPSEESP CEMPSPFNPH DLKEILERKT
501: NLTRQVEWWE DQYFHDLANI KKP
101: GSSRNNDKPR SSHSRISTCP SYFRWIHEDL RPWKETGVTR GMLEKARRTA HFRVVILDGR VYVKKYRKSI QTRDVFTLWG IVQLLRWYPG RLPDLELMFD
201: PDDRPTVRSK DFQGQQHPAP PPLFRYCSDD ASLDIVFPDW SFWGWAEVNI KPWDKSLVAI EEGNKMTQWK DRVAYAYWRG NPNVAPTRRD LLRCNVSAQE
301: DWNTRLYIQD WDRESREGFK NSNLENQCTH RYKIYIEGWA WSVSEKYIMA CDSMTLYVRP MFYDFYVRGM MPLQHYWPIR DTSKCTSLKF AVHWGNTHLD
401: QASKIGEEGS RFIREEVKME YVYDYMFHLM NEYAKLLKFK PEIPWGATEI TPDIMGCSAT GRWRDFMEES MVMFPSEESP CEMPSPFNPH DLKEILERKT
501: NLTRQVEWWE DQYFHDLANI KKP
Arabidopsis Description
DTA2Downstream target of AGL15 2 [Source:UniProtKB/TrEMBL;Acc:F4IH50]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.