Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- golgi 1
- nucleus 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37069 | Canola | golgi | 81.45 | 81.45 |
| CDY27355 | Canola | golgi, mitochondrion, nucleus, plasma membrane, plastid | 82.22 | 81.44 |
| CDY18897 | Canola | golgi, mitochondrion, plastid, vacuole | 78.39 | 80.23 |
| Bra039310.1-P | Field mustard | golgi, mitochondrion | 66.16 | 80.09 |
| AT3G61270.1 | Thale cress | cytosol, golgi, plasma membrane | 70.75 | 74.3 |
| KRH65106 | Soybean | cytosol | 21.8 | 65.9 |
| VIT_15s0046g03110.t01 | Wine grape | cytosol | 46.85 | 65.16 |
| GSMUA_Achr5P12260_001 | Banana | mitochondrion | 43.79 | 60.26 |
| VIT_15s0046g03150.t01 | Wine grape | golgi | 57.17 | 57.61 |
| CDX74769 | Canola | mitochondrion, peroxisome, plasma membrane, plastid | 69.41 | 56.9 |
| Bra004942.1-P | Field mustard | mitochondrion, peroxisome, plasma membrane, plastid | 69.41 | 56.9 |
| KRH48182 | Soybean | cytosol, golgi, plasma membrane | 54.68 | 56.08 |
| KRH65107 | Soybean | cytosol | 16.25 | 55.56 |
| Solyc01g094380.2.1 | Tomato | cytosol, extracellular, golgi, plastid | 51.05 | 52.05 |
| PGSC0003DMT400055754 | Potato | nucleus | 14.72 | 50.66 |
| Os02t0642700-01 | Rice | plastid | 44.36 | 48.95 |
| AT3G61290.1 | Thale cress | cytosol | 42.06 | 48.35 |
| AT2G45840.1 | Thale cress | plasma membrane | 47.23 | 47.23 |
| HORVU6Hr1G060750.4 | Barley | cytosol, peroxisome | 44.55 | 46.88 |
| TraesCS2B01G093400.1 | Wheat | golgi, mitochondrion, plastid | 44.93 | 46.81 |
| Solyc05g048800.1.1 | Tomato | cytosol | 21.41 | 46.09 |
| AT3G48980.2 | Thale cress | plastid | 47.8 | 45.87 |
| AT5G23850.1 | Thale cress | endoplasmic reticulum, mitochondrion, peroxisome, plastid | 47.42 | 45.76 |
| TraesCS6A01G237500.1 | Wheat | cytosol, mitochondrion | 39.58 | 44.14 |
| AT3G61280.1 | Thale cress | plasma membrane | 44.93 | 43.84 |
| TraesCS2D01G365600.1 | Wheat | plastid | 46.27 | 43.6 |
| Zm00001d002836_P006 | Maize | plastid | 44.93 | 43.44 |
| TraesCS6D01G220200.2 | Wheat | cytosol, mitochondrion | 39.77 | 43.42 |
| TraesCS2B01G386200.1 | Wheat | plastid | 45.89 | 43.4 |
| TraesCS2A01G368900.2 | Wheat | plastid | 45.7 | 43.06 |
| EES11181 | Sorghum | plastid | 45.51 | 42.88 |
| Zm00001d051287_P001 | Maize | plastid | 44.74 | 42.47 |
| EES07545 | Sorghum | plastid | 44.74 | 42.39 |
| TraesCSU01G025200.1 | Wheat | plastid | 45.51 | 42.27 |
| AT1G63420.1 | Thale cress | mitochondrion | 46.65 | 42.21 |
| Os04t0534100-01 | Rice | mitochondrion | 35.18 | 42.01 |
| TraesCS6B01G266000.1 | Wheat | plastid | 44.55 | 38.13 |
| AT1G07220.1 | Thale cress | mitochondrion | 36.33 | 37.48 |
Protein Annotations
| MapMan:35.2 | EntrezGene:819191 | ProteinID:AEC10607.1 | ProteinID:ANM61843.1 | ArrayExpress:AT2G45830 | EnsemblPlantsGene:AT2G45830 |
| RefSeq:AT2G45830 | TAIR:AT2G45830 | RefSeq:AT2G45830-TAIR-G | EnsemblPlants:AT2G45830.1 | TAIR:AT2G45830.1 | Unigene:At.36585 |
| ncoils:Coil | Symbol:DTA2 | UniProt:F4IH50 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0006629 | GO:GO:0006664 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0012505 | GO:GO:0016740 | GO:GO:0046527 | EMBL:KJ138853 | InterPro:LipoPS_modifying | RefSeq:NP_001324038.1 |
| RefSeq:NP_182107.3 | PFAM:PF05686 | PO:PO:0000293 | PO:PO:0009005 | PO:PO:0009047 | PO:PO:0020100 |
| PANTHER:PTHR12203 | PANTHER:PTHR12203:SF28 | SMART:SM00672 | TMHMM:TMhelix | UniParc:UPI000034EE99 | SEG:seg |
Description
DTA2Downstream target of AGL15 2 [Source:UniProtKB/TrEMBL;Acc:F4IH50]
Coordinates
chr2:+:18865923..18868542
Molecular Weight (calculated)
61779.7 Da
IEP (calculated)
9.159
GRAVY (calculated)
-0.631
Length
523 amino acids
Sequence
(BLAST)
(BLAST)
001: MLQRKSMKRN NNNLLTNKNK YVYLKTASHP AKSIAKATLF LVTSLFISAG LLDLLGCFDF TTFTGLKQVT TSIRKSPITS QRFPNQCGVV QNQTQLFPQN
101: GSSRNNDKPR SSHSRISTCP SYFRWIHEDL RPWKETGVTR GMLEKARRTA HFRVVILDGR VYVKKYRKSI QTRDVFTLWG IVQLLRWYPG RLPDLELMFD
201: PDDRPTVRSK DFQGQQHPAP PPLFRYCSDD ASLDIVFPDW SFWGWAEVNI KPWDKSLVAI EEGNKMTQWK DRVAYAYWRG NPNVAPTRRD LLRCNVSAQE
301: DWNTRLYIQD WDRESREGFK NSNLENQCTH RYKIYIEGWA WSVSEKYIMA CDSMTLYVRP MFYDFYVRGM MPLQHYWPIR DTSKCTSLKF AVHWGNTHLD
401: QASKIGEEGS RFIREEVKME YVYDYMFHLM NEYAKLLKFK PEIPWGATEI TPDIMGCSAT GRWRDFMEES MVMFPSEESP CEMPSPFNPH DLKEILERKT
501: NLTRQVEWWE DQYFHDLANI KKP
101: GSSRNNDKPR SSHSRISTCP SYFRWIHEDL RPWKETGVTR GMLEKARRTA HFRVVILDGR VYVKKYRKSI QTRDVFTLWG IVQLLRWYPG RLPDLELMFD
201: PDDRPTVRSK DFQGQQHPAP PPLFRYCSDD ASLDIVFPDW SFWGWAEVNI KPWDKSLVAI EEGNKMTQWK DRVAYAYWRG NPNVAPTRRD LLRCNVSAQE
301: DWNTRLYIQD WDRESREGFK NSNLENQCTH RYKIYIEGWA WSVSEKYIMA CDSMTLYVRP MFYDFYVRGM MPLQHYWPIR DTSKCTSLKF AVHWGNTHLD
401: QASKIGEEGS RFIREEVKME YVYDYMFHLM NEYAKLLKFK PEIPWGATEI TPDIMGCSAT GRWRDFMEES MVMFPSEESP CEMPSPFNPH DLKEILERKT
501: NLTRQVEWWE DQYFHDLANI KKP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.