Factsheet for AT3G61280.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plasma membrane, plastid
BaCelLo:	plastid
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007592.1-P	Field mustard	cytosol	55.41	88.66
CDX71750	Canola	plasma membrane	83.21	85.77
CDY48931	Canola	plasma membrane	51.31	83.84
AT3G61290.1	Thale cress	cytosol	65.49	77.14
AT2G45840.1	Thale cress	plasma membrane	60.45	61.95
VIT_15s0046g03100.t01	Wine grape	mitochondrion	13.81	57.81
VIT_15s0046g03140.t01	Wine grape	cytosol	23.88	54.94
KRH40487	Soybean	cytosol	34.7	53.6
GSMUA_Achr5P12260_001	Banana	mitochondrion	37.13	52.37
KRH00707	Soybean	cytosol	33.02	48.36
KRH65090	Soybean	extracellular	41.23	46.43
VIT_15s0046g03130.t01	Wine grape	cytosol	19.22	46.4
Os02t0642700-01	Rice	plastid	40.67	45.99
KRH48168	Soybean	plasma membrane	42.16	45.47
AT3G61270.1	Thale cress	cytosol, golgi, plasma membrane	41.79	44.98
AT2G45830.1	Thale cress	mitochondrion	43.84	44.93
KRH65092	Soybean	endoplasmic reticulum, plasma membrane, vacuole	41.23	44.2
AT3G48980.2	Thale cress	plastid	44.78	44.04
AT5G23850.1	Thale cress	endoplasmic reticulum, mitochondrion, peroxisome, plastid	44.03	43.54
HORVU6Hr1G060750.4	Barley	cytosol, peroxisome	39.74	42.86
EES07545	Sorghum	plastid	43.47	42.21
Zm00001d051287_P001	Maize	plastid	43.1	41.92
TraesCS2B01G093400.1	Wheat	golgi, mitochondrion, plastid	39.18	41.83
Os04t0534100-01	Rice	mitochondrion	33.77	41.32
TraesCS6A01G237500.1	Wheat	cytosol, mitochondrion	35.82	40.94
Zm00001d002836_P006	Maize	plastid	41.23	40.85
TraesCS6D01G220200.2	Wheat	cytosol, mitochondrion	36.19	40.5
EES11181	Sorghum	plastid	41.23	39.82
AT1G63420.1	Thale cress	mitochondrion	42.72	39.62
TraesCS2B01G386200.1	Wheat	plastid	40.11	38.88
TraesCS2A01G368900.2	Wheat	plastid	40.11	38.74
TraesCSU01G025200.1	Wheat	plastid	40.67	38.72
TraesCS2D01G365600.1	Wheat	plastid	39.93	38.56
AT1G07220.1	Thale cress	mitochondrion	34.89	36.88
TraesCS6B01G266000.1	Wheat	plastid	41.98	36.82

Protein Annotations

MapMan:35.2	EntrezGene:825300	ProteinID:AEE80182.1	EMBL:AK229790	ArrayExpress:AT3G61280	EnsemblPlantsGene:AT3G61280
RefSeq:AT3G61280	TAIR:AT3G61280	RefSeq:AT3G61280-TAIR-G	EnsemblPlants:AT3G61280.1	TAIR:AT3G61280.1	EMBL:AY800630
EMBL:AY954856	Unigene:At.51230	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005623	GO:GO:0006629	GO:GO:0006664	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0012505	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0046527	EMBL:KJ138780
InterPro:LipoPS_modifying	RefSeq:NP_191687.2	PFAM:PF05686	PO:PO:0000293	PANTHER:PTHR12203	PANTHER:PTHR12203:SF28
UniProt:Q5Q0C1	SMART:SM00672	TMHMM:TMhelix	UniParc:UPI000048E7BD	SEG:seg	:

Description

Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:Q5Q0C1]

Coordinates

chr3:+:22680960..22683769

Molecular Weight (calculated)

63161.0 Da

IEP (calculated)

9.433

GRAVY (calculated)

-0.539

Length

536 amino acids

Sequence
(BLAST)

001: MRENTQVAQF TEDHHQRHQT PITCLSSKLA KIWTLFTTKI FIFVLFIILL SASVSWMYAF VLGENKFQVT SIFTRNTKKS TPTKTTTTTD IPKIAIKIPL
101: NCTSLNSNTT QTCPSNYPTK FEPAISSSET CPDYFKWIHR DLKVWQKTGI TRETLERARP NAHFRIVIKS GRLYVHQYEK AFQTRDVFTI WGILQLLRMY
201: PGQIPDLELL FLCHDRPAIW KRDLKKKRKD TWPPPPLFHY CGHRDAYDIV FPDWSFWGWP ELNIKEWNKL SVALKEGNKK VKWEDRVPYA YWKGNPHVSP
301: IRGDLMRCNF SDKYDPMVRL YVQDWRSEIE AGFRGSNLED QCTHRYKIYI EGNAWSVSEK YILSCDSMTL LVKPEYYDFF FRSMVPMKHF WPIRQNNKCG
401: DLKFAVEWGN NNTEKAQIIG RQGSEYMMKN LKMKYVYDYM LYVLQGYGKL MKLDVTVPEN ATEVCSETMA CSITDGGRIR QCMDDSLVMS PSVKAACDLP
501: PSYGDYELKK FRKKQESAER KVEQWTNKYW NLRDPK

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.