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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 5
  • plasma membrane 1
  • vacuole 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra027639.1-P Field mustard mitochondrion 84.95 84.95
CDY25494 Canola mitochondrion 84.95 84.8
VIT_02s0025g03710.t01 Wine grape cytosol 29.07 61.76
GSMUA_Achr5P12260_001 Banana mitochondrion 38.75 58.95
PGSC0003DMT400000701 Potato mitochondrion 7.44 55.84
KRH77521 Soybean endoplasmic reticulum, nucleus, plasma membrane, plastid 48.1 53.26
VIT_02s0025g03720.t01 Wine grape endoplasmic reticulum, extracellular, plasma membrane 19.2 50.23
Os02t0642700-01 Rice plastid 41.18 50.21
AT3G61270.1 Thale cress cytosol, golgi, plasma membrane 41.7 48.39
TraesCS2B01G093400.1 Wheat golgi, mitochondrion, plastid 41.87 48.21
HORVU6Hr1G060750.4 Barley cytosol, peroxisome 40.83 47.48
AT3G61290.1 Thale cress cytosol 36.85 46.81
AT5G23850.1 Thale cress endoplasmic reticulum, mitochondrion, peroxisome, plastid 43.77 46.68
AT2G45830.1 Thale cress mitochondrion 42.21 46.65
TraesCS6A01G237500.1 Wheat cytosol, mitochondrion 37.37 46.06
TraesCS2D01G365600.1 Wheat plastid 43.94 45.77
TraesCS2B01G386200.1 Wheat plastid 43.25 45.21
TraesCS6D01G220200.2 Wheat cytosol, mitochondrion 37.2 44.89
AT2G45840.1 Thale cress plasma membrane 40.48 44.74
Zm00001d002836_P006 Maize plastid 41.87 44.73
Zm00001d051287_P001 Maize plastid 42.56 44.65
EES07545 Sorghum plastid 42.56 44.57
AT3G48980.2 Thale cress plastid 41.87 44.4
TraesCS2A01G368900.2 Wheat plastid 42.56 44.32
EES11181 Sorghum plastid 42.39 44.14
TraesCSU01G025200.1 Wheat plastid 42.21 43.34
AT3G61280.1 Thale cress plasma membrane 39.62 42.72
Os04t0534100-01 Rice mitochondrion 31.83 42.01
AT1G07220.1 Thale cress mitochondrion 36.33 41.42
TraesCS6B01G266000.1 Wheat plastid 42.73 40.43
Protein Annotations
MapMan:35.2EntrezGene:842648ProteinID:AEE34097.1ArrayExpress:AT1G63420EnsemblPlantsGene:AT1G63420RefSeq:AT1G63420
TAIR:AT1G63420RefSeq:AT1G63420-TAIR-GEnsemblPlants:AT1G63420.1TAIR:AT1G63420.1UniProt:F4I232GO:GO:0003674
GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005768
GO:GO:0005794GO:GO:0005802GO:GO:0006629GO:GO:0006664GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0012505GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0046527
EMBL:KJ138955InterPro:LipoPS_modifyingRefSeq:NP_176531.1PFAM:PF05686PO:PO:0000013PO:PO:0000037
PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185
PO:PO:0004507PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115
PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006
PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031
PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038
PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025281PANTHER:PTHR12203PANTHER:PTHR12203:SF59
SMART:SM00672TMHMM:TMhelixUniParc:UPI00001631EFSEG:seg::
Description
Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:F4I232]
Coordinates
chr1:+:23515680..23518944
Molecular Weight (calculated)
67062.1 Da
IEP (calculated)
9.105
GRAVY (calculated)
-0.557
Length
578 amino acids
Sequence
(BLAST)
001: MTSLFSKPRA LTSHITNFKT YRPVIGKLHV ATLTLLLFLI AAGIAVTSSL WLNKTTKAFD RPTLVATKPE PELEPPHETG VLVNCTSFLN QNRSGSCSRT
101: PLLNKKKPSH RPTITTIKPV PVRVSEKKSP EETGSSVDCS SFLNQNRSGS CSRTLQSGYN QNQTESNRSC PDYFKWIHED LKPWRETGIT KEMVERGKTT
201: AHFRLVILNG KVFVENYKKS IQTRDAFTLW GILQLLRKYP GKLPDVDLMF DCDDRPVIRS DGYNILNRTV ENAPPPLFRY CGDRWTVDIV FPDWSFWGWQ
301: EINIREWSKV LKEMEEGKKK KKFMERDAYA YWKGNPFVAS PSREDLLTCN LSSLHDWNAR IFIQDWISEG QRGFENSNVA NQCTYRYKIY IEGYAWSVSE
401: KYILACDSVT LMVKPYYYDF FSRTLQPLQH YWPIRDKDKC RSIKFAVDWL NNHTQKAQEI GREASEFMQR DLSMENVYDY MFHLLNEYSK LLKYKPQVPK
501: NSVELCTEAL VCPSEGEDVN GVDKKFMIGS LVSRPHASGP CSLPPPFDSN GLEKFHRKKL NLIRQVEKWE DSYWQKVL
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.