CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 1
mitochondrion 1
endoplasmic reticulum 3
extracellular 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	endoplasmic reticulum, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48932	Canola	endoplasmic reticulum	98.98	98.98
Bra007590.1-P	Field mustard	cytosol	97.96	97.96
CDY69828	Canola	mitochondrion	75.56	96.61
CDY58789	Canola	endoplasmic reticulum, golgi	84.11	82.93
CDY45704	Canola	endoplasmic reticulum, golgi	83.91	82.73
AT3G61270.1	Thale cress	cytosol, golgi, plasma membrane	83.91	82.73
CDY18897	Canola	golgi, mitochondrion, plastid, vacuole	70.67	67.91
CDY37069	Canola	golgi	71.28	66.92
CDY27355	Canola	golgi, mitochondrion, nucleus, plasma membrane, plastid	71.28	66.29
KRH65106	Soybean	cytosol	23.22	65.9
VIT_15s0046g03110.t01	Wine grape	cytosol	48.88	63.83
GSMUA_Achr5P12260_001	Banana	mitochondrion	46.64	60.26
KRH65107	Soybean	cytosol	17.92	57.52
VIT_15s0046g03150.t01	Wine grape	golgi	58.45	55.3
KRH48182	Soybean	cytosol, golgi, plasma membrane	57.23	55.1
CDX71752	Canola	cytosol	45.62	52.09
Solyc01g094380.2.1	Tomato	cytosol, extracellular, golgi, plastid	53.16	50.88
PGSC0003DMT400055754	Potato	nucleus	15.68	50.66
Os02t0642700-01	Rice	plastid	47.25	48.95
CDX74769	Canola	mitochondrion, peroxisome, plasma membrane, plastid	61.3	47.18
CDX89107	Canola	mitochondrion	43.79	46.94
HORVU6Hr1G060750.4	Barley	cytosol, peroxisome	47.25	46.68
CDX71749	Canola	cytosol, golgi, plasma membrane	40.94	46.31
CDX88050	Canola	plastid	49.9	45.88
TraesCS2B01G093400.1	Wheat	golgi, mitochondrion, plastid	46.84	45.82
Solyc05g048800.1.1	Tomato	cytosol	22.4	45.27
CDX80388	Canola	plastid	49.29	45.23
CDY48930	Canola	plasma membrane	48.47	44.91
CDX71750	Canola	plasma membrane	47.05	44.42
TraesCS6A01G237500.1	Wheat	cytosol, mitochondrion	42.16	44.14
Zm00001d002836_P006	Maize	plastid	48.27	43.81
CDY08097	Canola	plastid	48.27	43.33
EES11181	Sorghum	plastid	48.88	43.24
TraesCS6D01G220200.2	Wheat	cytosol, mitochondrion	42.16	43.22
CDY05887	Canola	golgi	47.86	42.96
EES07545	Sorghum	plastid	48.07	42.75
TraesCS2A01G368900.2	Wheat	plastid	48.27	42.7
TraesCS2D01G365600.1	Wheat	plastid	48.07	42.52
TraesCS2B01G386200.1	Wheat	plastid	47.86	42.5
Zm00001d051287_P001	Maize	plastid	47.66	42.47
CDY18896	Canola	golgi, plasma membrane, plastid	33.6	41.88
CDY25494	Canola	mitochondrion	49.29	41.8
Os04t0534100-01	Rice	mitochondrion	37.27	41.78
TraesCSU01G025200.1	Wheat	plastid	47.45	41.39
CDY09932	Canola	endoplasmic reticulum, golgi	40.53	39.48
CDY06688	Canola	mitochondrion	40.12	39.09
CDY48931	Canola	plasma membrane	26.07	39.02
CDY59071	Canola	endoplasmic reticulum, golgi, vacuole	40.33	38.98
CDY10259	Canola	mitochondrion	39.92	38.97
TraesCS6B01G266000.1	Wheat	plastid	47.45	38.13
CDY42493	Canola	cytosol	43.18	24.51

Protein Annotations

EnsemblPlants:CDX71753	EnsemblPlantsGene:GSBRNA2T00155451001	GO:A0A078C9Q9	InterPro:LipoPS_modifying	ncoils:Coil	PANTHER:PTHR12203
PANTHER:PTHR12203:SF28	PFAM:PF05686	ProteinID:CDX71753	ProteinID:CDX71753.1	SMART:SM00672	TMHMM:TMhelix
UniParc:UPI0004EE34B8	MapMan:35.2	:	:	:	:

Description

BnaC08g31210D

Coordinates

chrLK031795:-:321109..323040

Molecular Weight (calculated)

57906.1 Da

IEP (calculated)

7.569

GRAVY (calculated)

-0.582

Length

491 amino acids

Sequence
(BLAST)

001: MKLNNNDEQH KVVSLLGKNV VKATVFIVVS LFILGYLHFN DSADFKLITK INVPKFPNQC GAVQNQSHQV HISQNLASRL NLNRSKQTTC PSYFRWIHED
101: LRPWKATGIT RDMVEKAGRT AHFRLVIHGG KAYVKRYKKS IQTRADFTLW GILQLLRWYP GRLPDLELMF DADDRPIVRS DDFKGQNMDP PPLFRYCSDD
201: ASLDIVFPDW SFWGWAEINI EPWGKSLEAI KKGNNITQWK DRVAYAYWKG NPDVDPGRKD LLRCNVSEHE DWNTRLYIQD WDKESKEGFK NSNLENQCTH
301: RYKIYIEGWA WSVSEKYIMA CDSMTLYVKP RFYDFYIRGM MPLQHYWPIR DDSKCTSLKF AVHWGNTHVD KAREIGEVGS RFIREEVNMK YVYDYMFHLL
401: NEYAKLLKFK PEIPLDAEEI TPDNMGCPAT ERWRDFMAES MVMSPSEELP CEMLPPYDRL ALKEVLEKKA NLTRQVELWE DQYFHDLTNK P

Best Arabidopsis Sequence Match ( AT3G61270.1 )
(BLAST)

001: MKMNNNDGQH NKTVTFPRKS IVKATVFIVV LFISAAILDL LGYLDFNAFA GLKLTTKTKE PNPYGCDFVQ NQSSQTPISQ NRKSRLNPNN SSKSSTCPSY
101: FRWIHEDLRP WKQTGITRGM IEEASRTAHF RLVIRNGKAY VKRYKKSIQT RDEFTLWGIL QLLRWYPGKL PDLELMFDAD DRPVVRSVDF IGQQKEPPPV
201: FRYCSDDASL DIVFPDWSFW GWAEVNVKPW GKSLEAIKEG NSMTQWKDRV AYAYWRGNPY VDPGRGDLLK CNATEHEEWN TRLYIQDWDK ETKEGFKNSN
301: LENQCTHRYK IYIEGWAWSV SEKYIMACDS MTLYVKPRFY DFYIRGMMPL QHYWPIRDDS KCTSLKFAVH WGNTHEDKAR EIGEVGSRFI REEVNMQYVY
401: DYMFHLLKEY ATLLKFKPEI PLDAEEITPD SMGCPATERW RDFKAESMII SPSEESPCEM LPPYDPLALK EVLERKANLT RQVELWENQY FQNLTNKP

Arabidopsis Description

Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:Q9M2D7]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.