Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G328500.1 | Wheat | cytosol | 97.78 | 54.42 |
| TraesCS7B01G229100.2 | Wheat | cytosol, endoplasmic reticulum, plastid | 97.78 | 52.92 |
| HORVU0Hr1G021480.1 | Barley | cytosol, golgi, nucleus | 93.97 | 52.39 |
| GSMUA_Achr1P06820_001 | Banana | mitochondrion | 49.52 | 48.6 |
| GSMUA_Achr2P03930_001 | Banana | cytosol | 54.92 | 46.76 |
| GSMUA_Achr2P03920_001 | Banana | mitochondrion | 52.7 | 44.38 |
| TraesCS7D01G410200.1 | Wheat | cytosol, extracellular, golgi | 75.24 | 44.05 |
| TraesCS7D01G325000.2 | Wheat | cytosol | 76.19 | 43.48 |
| GSMUA_Achr4P05440_001 | Banana | nucleus | 57.46 | 41.51 |
| Os08t0101800-01 | Rice | cytosol | 67.62 | 36.79 |
| EES13178 | Sorghum | nucleus | 69.21 | 36.7 |
| Zm00001d052744_P001 | Maize | cytosol | 67.94 | 35.73 |
| TraesCS2D01G365700.1 | Wheat | golgi | 52.38 | 35.56 |
| GSMUA_Achr4P11970_001 | Banana | golgi, nucleus, plasma membrane | 58.41 | 34.91 |
| TraesCS6D01G220200.2 | Wheat | cytosol, mitochondrion | 51.43 | 33.82 |
| GSMUA_Achr1P06810_001 | Banana | mitochondrion | 51.75 | 29.58 |
| GSMUA_Achr2P03940_001 | Banana | mitochondrion | 53.65 | 28.12 |
| TraesCS2D01G365600.1 | Wheat | plastid | 49.52 | 28.11 |
| TraesCS1D01G098300.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 40.32 | 26.13 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G325300.1 | EnsemblPlantsGene:TraesCS7D01G325300 | InterPro:LipoPS_modifying | PANTHER:PTHR12203 | PANTHER:PTHR12203:SF31 | PFAM:PF05686 |
| SEG:seg | SMART:SM00672 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr7D:-:415681977..415682924
Molecular Weight (calculated)
36359.1 Da
IEP (calculated)
5.899
GRAVY (calculated)
-0.603
Length
315 amino acids
Sequence
(BLAST)
(BLAST)
001: MFNCEDMPEL RAADYPDTSA APPLFRYCKD GTSVEVLFPD WSFWGWPEVN IRPWGPLMKE IAKENARLPW PDREPYAFWK GNRGVSEARR DLFRCSNDSA
101: AGKDWNARLF ALDWGAANRN GFKGSNLAEQ CRYRYKIYVQ GRSWSVSEKY ILACDSPMLA IDTPFEDFFS RGLVAGRHYW PVDPKDKCRA VKFAVDWGNA
201: HPALAQRMGK EGSGFAREEM SMDYVYDYML HVLTQYAALL RYKPTVPENA VELCPESMAC SAQGRDREFM MESREMYVAG YEPCTLPPPF TAEEEREMAA
301: REEDVRRKVV KMKGR
101: AGKDWNARLF ALDWGAANRN GFKGSNLAEQ CRYRYKIYVQ GRSWSVSEKY ILACDSPMLA IDTPFEDFFS RGLVAGRHYW PVDPKDKCRA VKFAVDWGNA
201: HPALAQRMGK EGSGFAREEM SMDYVYDYML HVLTQYAALL RYKPTVPENA VELCPESMAC SAQGRDREFM MESREMYVAG YEPCTLPPPF TAEEEREMAA
301: REEDVRRKVV KMKGR
001: MLEKARRTAH FRVVILDGRV YVKKYRKSIQ TRDVFTLWGI VQLLRWYPGR LPDLELMFDP DDRPTVRSKD FQGQQHPAPP PLFRYCSDDA SLDIVFPDWS
101: FWGWAEVNIK PWDKSLVAIE EGNKMTQWKD RVAYAYWRGN PNVAPTRRDL LRCNVSAQED WNTRLYIQDW DRESREGFKN SNLENQCTHR YKIYIEGWAW
201: SVSEKYIMAC DSMTLYVRPM FYDFYVRGMM PLQHYWPIRD TSKCTSLKFA VHWGNTHLDQ ASKIGEEGSR FIREEVKMEY VYDYMFHLMN EYAKLLKFKP
301: EIPWGATEIT PDIMGCSATG RWRDFMEESM VMFPSEESPC EMPSPFNPHD LKEILERKTN LTRQVEWWED QYFHDLANIK KP
101: FWGWAEVNIK PWDKSLVAIE EGNKMTQWKD RVAYAYWRGN PNVAPTRRDL LRCNVSAQED WNTRLYIQDW DRESREGFKN SNLENQCTHR YKIYIEGWAW
201: SVSEKYIMAC DSMTLYVRPM FYDFYVRGMM PLQHYWPIRD TSKCTSLKFA VHWGNTHLDQ ASKIGEEGSR FIREEVKMEY VYDYMFHLMN EYAKLLKFKP
301: EIPWGATEIT PDIMGCSATG RWRDFMEESM VMFPSEESPC EMPSPFNPHD LKEILERKTN LTRQVEWWED QYFHDLANIK KP
Arabidopsis Description
DTA2Downstream target of AGL15 2 [Source:UniProtKB/TrEMBL;Acc:F4IH50]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.