Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY15855 | Canola | cytosol | 66.06 | 96.23 |
| AT5G44220.1 | Thale cress | plastid | 31.35 | 41.02 |
| Bra030272.1-P | Field mustard | plastid | 16.32 | 38.18 |
| Bra006410.1-P | Field mustard | cytosol | 34.46 | 35.37 |
| Bra010723.1-P | Field mustard | cytosol | 21.76 | 35.0 |
| Bra038513.1-P | Field mustard | nucleus | 26.17 | 34.47 |
| Bra030237.1-P | Field mustard | cytosol | 35.75 | 33.99 |
| Bra006409.1-P | Field mustard | cytosol | 31.61 | 33.24 |
Protein Annotations
| Gene3D:1.20.1280.50 | MapMan:35.1 | EnsemblPlantsGene:Bra030271 | EnsemblPlants:Bra030271.1 | EnsemblPlants:Bra030271.1-P | InterPro:F-box-assoc_dom_typ3 |
| InterPro:F-box-assoc_interact_dom | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:Gal_Oxase/kelch_b-propeller | InterPro:IPR001810 | UniProt:M4ENA1 | PFAM:PF00646 | PFAM:PF08268 | PANTHER:PTHR31790 |
| PANTHER:PTHR31790:SF10 | SMART:SM00256 | SUPFAM:SSF50965 | SUPFAM:SSF81383 | TIGRFAMs:TIGR01640 | UniParc:UPI000254400F |
Description
AT5G44220 (E=1e-039) | F-box family protein
Coordinates
chrA04:-:9462722..9463882
Molecular Weight (calculated)
43681.5 Da
IEP (calculated)
10.236
GRAVY (calculated)
-0.010
Length
386 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPTPPSLGV RKRRKKTISD LLPIDLVMQI FKRLPVKTLA RLICVSKLCA SIIRSRDFMK VFLTNRHGRL FFTFKRYKDS ILFTASLQTL NPCEASVAMT
101: HPAFDVDAKN CSYLHGLICY ASACASRVLV YNSSTRKLTT LPIFQPGTPV RNHFLGYDGI AGVYKVLCRT GPNPVFQIMT LGDGSSWKTV NVGQYSHFPL
201: KKHICIDGVL YYEACADKNL KGTAFIMRFD VRSESFERVK MSGDNVKCSA MVTYEGKLAI ISKVISADGG VVLWVLEDAV KHKWLKKVFV LPNSWTSLVQ
301: GQSTAAYWFH RFVDVNDAGE FVLAPSSVRI RHYVLFYDPK RNSMRKVAVN GIKVPIRYDS NRRFNRPDSC SLLHLFSSQV ESPMFL
101: HPAFDVDAKN CSYLHGLICY ASACASRVLV YNSSTRKLTT LPIFQPGTPV RNHFLGYDGI AGVYKVLCRT GPNPVFQIMT LGDGSSWKTV NVGQYSHFPL
201: KKHICIDGVL YYEACADKNL KGTAFIMRFD VRSESFERVK MSGDNVKCSA MVTYEGKLAI ISKVISADGG VVLWVLEDAV KHKWLKKVFV LPNSWTSLVQ
301: GQSTAAYWFH RFVDVNDAGE FVLAPSSVRI RHYVLFYDPK RNSMRKVAVN GIKVPIRYDS NRRFNRPDSC SLLHLFSSQV ESPMFL
001: MEKQRSKKTK ISDDLITCSG NSVQIPFDLI PEILKRLPVK TLARFLSVSK EYTSIIRNRD FMKSYLINSS TRPQSLIFTI AGGGIHCFFS LIDQGESTSS
101: SKPTYLMNCP HLQLKTFAPS VHGLICHGPP STLIVSSPRL IVSNPSTRRS IILPKIDANH ECIYHHMGYD PIDGDYKVLC MMKGMHVYQR RYLAKELQVF
201: TLRKGNSWRM VEDFPPHCLC HEDTPDLCIN GVLYYVAMLD TASNHAVMSF DVRSEKFDLI KGGPDGDLNP KLTRYEGKPA LLFPGSDYRI NLWVIEDAAK
301: HEWSKMSYDV SSTSLIRNPY FHHCVFCTND AGEIVLAPDF VRTKTFVVLY YHPKKNTMRS VVIKGIRDRK IPLWDEASYH RIISVFSGQV DNLMFL
101: SKPTYLMNCP HLQLKTFAPS VHGLICHGPP STLIVSSPRL IVSNPSTRRS IILPKIDANH ECIYHHMGYD PIDGDYKVLC MMKGMHVYQR RYLAKELQVF
201: TLRKGNSWRM VEDFPPHCLC HEDTPDLCIN GVLYYVAMLD TASNHAVMSF DVRSEKFDLI KGGPDGDLNP KLTRYEGKPA LLFPGSDYRI NLWVIEDAAK
301: HEWSKMSYDV SSTSLIRNPY FHHCVFCTND AGEIVLAPDF VRTKTFVVLY YHPKKNTMRS VVIKGIRDRK IPLWDEASYH RIISVFSGQV DNLMFL
Arabidopsis Description
F-box protein At2g21930 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ06]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.