Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY25598 | Canola | cytosol | 94.33 | 93.87 |
| Bra030272.1-P | Field mustard | plastid | 25.62 | 63.03 |
| AT2G21930.2 | Thale cress | cytosol | 48.77 | 50.0 |
| Bra010723.1-P | Field mustard | cytosol | 27.09 | 45.83 |
| Bra038513.1-P | Field mustard | nucleus | 31.28 | 43.34 |
| Bra006409.1-P | Field mustard | cytosol | 35.96 | 39.78 |
| Bra006410.1-P | Field mustard | cytosol | 35.47 | 38.3 |
| Bra030271.1-P | Field mustard | cytosol | 33.99 | 35.75 |
Protein Annotations
| MapMan:35.1 | EnsemblPlantsGene:Bra030237 | EnsemblPlants:Bra030237.1 | EnsemblPlants:Bra030237.1-P | InterPro:F-box-assoc_dom_typ3 | InterPro:F-box-assoc_interact_dom |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:Gal_Oxase/kelch_b-propeller |
| InterPro:IPR001810 | UniProt:M4EN67 | PFAM:PF08268 | PANTHER:PTHR31790 | PANTHER:PTHR31790:SF10 | SMART:SM00256 |
| SUPFAM:SSF50965 | SUPFAM:SSF81383 | TIGRFAMs:TIGR01640 | TMHMM:TMhelix | UniParc:UPI0002544203 | SEG:seg |
Description
AT2G21930 (E=2e-077) | F-box family protein
Coordinates
chrA04:-:9744618..9745838
Molecular Weight (calculated)
46174.5 Da
IEP (calculated)
9.496
GRAVY (calculated)
-0.376
Length
406 amino acids
Sequence
(BLAST)
(BLAST)
001: MERQKSKLAK NNNISDDVRT SGEGSITLDL IPEILKDLPV KTLARFLCVS KPWSSIIRNR DFVKSYLIKS TNHPQGLIFT FKSKRHGKHV FFSSSSQRQD
101: GGGESSLSCA ASYHMKCHSQ PYTAITPSVH GLICYGPPSK LMVYNPSTRR SIALPNVDAH RLRMYHYLGY DPIGGDYKML CMSRGMHARR GRGLAHKIQV
201: LTLVNGSSWR MIEDSPPPHS PESPHICIDG VLYYGGYLDT STRLLRKDHV VMSFDVRSEK FDMIKVPTER ATRFTRMTRY NGKLALMFTG YGGFGCGYSG
301: YIELWVLEDA ARHQWSNKNF VLPRLASRDT LFQVFCAIDG SGEFVLAPDT LHPPTFYVMY YDPNNNSMRR VDIEGIADKK LQFWDDDSDR RTISIFPGHV
401: ENLLFL
101: GGGESSLSCA ASYHMKCHSQ PYTAITPSVH GLICYGPPSK LMVYNPSTRR SIALPNVDAH RLRMYHYLGY DPIGGDYKML CMSRGMHARR GRGLAHKIQV
201: LTLVNGSSWR MIEDSPPPHS PESPHICIDG VLYYGGYLDT STRLLRKDHV VMSFDVRSEK FDMIKVPTER ATRFTRMTRY NGKLALMFTG YGGFGCGYSG
301: YIELWVLEDA ARHQWSNKNF VLPRLASRDT LFQVFCAIDG SGEFVLAPDT LHPPTFYVMY YDPNNNSMRR VDIEGIADKK LQFWDDDSDR RTISIFPGHV
401: ENLLFL
001: MEKQRSKKTK ISDDLITCSG NSVQIPFDLI PEILKRLPVK TLARFLSVSK EYTSIIRNRD FMKSYLINSS TRPQSLIFTI AGGGIHCFFS LIDQGESTSS
101: SKPTYLMNCP HLQLKTFAPS VHGLICHGPP STLIVSSPRL IVSNPSTRRS IILPKIDANH ECIYHHMGYD PIDGDYKVLC MMKGMHVYQR RYLAKELQVF
201: TLRKGNSWRM VEDFPPHCLC HEDTPDLCIN GVLYYVAMLD TASNHAVMSF DVRSEKFDLI KGGPDGDLNP KLTRYEGKPA LLFPGSDYRI NLWVIEDAAK
301: HEWSKMSYDV SSTSLIRNPY FHHCVFCTND AGEIVLAPDF VRTKTFVVLY YHPKKNTMRS VVIKGIRDRK IPLWDEASYH RIISVFSGQV DNLMFL
101: SKPTYLMNCP HLQLKTFAPS VHGLICHGPP STLIVSSPRL IVSNPSTRRS IILPKIDANH ECIYHHMGYD PIDGDYKVLC MMKGMHVYQR RYLAKELQVF
201: TLRKGNSWRM VEDFPPHCLC HEDTPDLCIN GVLYYVAMLD TASNHAVMSF DVRSEKFDLI KGGPDGDLNP KLTRYEGKPA LLFPGSDYRI NLWVIEDAAK
301: HEWSKMSYDV SSTSLIRNPY FHHCVFCTND AGEIVLAPDF VRTKTFVVLY YHPKKNTMRS VVIKGIRDRK IPLWDEASYH RIISVFSGQV DNLMFL
Arabidopsis Description
F-box protein At2g21930 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJ06]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.