Factsheet for Bra017181.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18439	Canola	nucleus	79.93	99.53
CDX93373	Canola	nucleus	77.68	95.11
AT2G37520.1	Thale cress	nucleus	81.67	79.01
AT3G53680.2	Thale cress	nucleus	72.82	69.28
PGSC0003DMT400028730	Potato	nucleus	39.53	61.67
KRH19715	Soybean	nucleus	59.6	53.77
KRH32312	Soybean	nucleus	59.48	53.54
VIT_08s0040g03340.t01	Wine grape	nucleus	57.86	52.91
Solyc10g084650.1.1	Tomato	nucleus	57.11	33.95
GSMUA_Achr6P33300_001	Banana	plastid	23.94	29.05
Bra011988.1-P	Field mustard	nucleus	33.42	26.72
Bra017226.1-P	Field mustard	nucleus	34.41	26.49
Zm00001d027880_P002	Maize	nucleus	15.71	25.87
Bra034381.1-P	Field mustard	nucleus	33.79	25.33
Bra010170.1-P	Field mustard	cytosol, mitochondrion, nucleus	8.1	22.81
Zm00001d028660_P013	Maize	endoplasmic reticulum	24.06	22.55
OQU93136	Sorghum	cytosol	19.58	22.27
TraesCS4B01G204700.1	Wheat	cytosol	27.06	21.4
HORVU4Hr1G059010.32	Barley	plastid	25.81	21.34
TraesCS4A01G099600.1	Wheat	cytosol	26.93	21.3
TraesCS4D01G205600.2	Wheat	cytosol	27.06	21.25
Bra024246.1-P	Field mustard	nucleus	12.47	21.23
OQU92810	Sorghum	cytosol	24.81	21.17
Bra002633.1-P	Field mustard	plastid	10.97	20.85
Os03t0278700-01	Rice	cytosol, nucleus	23.19	19.56
Bra020653.1-P	Field mustard	nucleus	14.21	19.22
Bra037758.1-P	Field mustard	nucleus	13.47	18.75
Bra035350.1-P	Field mustard	nucleus	16.71	12.75
Bra027290.1-P	Field mustard	nucleus	17.46	12.57
Bra002634.1-P	Field mustard	endoplasmic reticulum, vacuole	0.0	0.0

Protein Annotations

MapMan:15.5.30	Gene3D:3.30.40.10	Gene3D:3.40.630.30	InterPro:Acyl_CoA_acyltransferase	EnsemblPlantsGene:Bra017181	EnsemblPlants:Bra017181.1
EnsemblPlants:Bra017181.1-P	GO:GO:0003674	GO:GO:0005488	GO:GO:0046872	InterPro:IPR013083	InterPro:IPR019787
InterPro:Jas	UniProt:M4DL00	PFAM:PF00628	PFAM:PF16135	ScanProsite:PS01359	PFscan:PS50016
PANTHER:PTHR42672	PANTHER:PTHR42672:SF4	SMART:SM00249	SUPFAM:SSF55729	SUPFAM:SSF57903	UniParc:UPI000254460D
InterPro:Zinc_finger_PHD-type_CS	InterPro:Znf_FYVE_PHD	InterPro:Znf_PHD	InterPro:Znf_PHD-finger	InterPro:Znf_RING/FYVE/PHD	SEG:seg

Description

AT3G53680 (E=5e-271) | PHD finger transcription factor, putative

Coordinates

chrA04:-:16169755..16174196

Molecular Weight (calculated)

88522.2 Da

IEP (calculated)

7.037

GRAVY (calculated)

-0.407

Length

802 amino acids

Sequence
(BLAST)

001: MGEEEEEGAV SLEGAVLKRE RLCVEGEEEE SPNKKQAKEP SNDDIVSEIS NPVSSPVENT SRFHPVKSGS GDFGSEETVS DEERSGNEQF VLEIPKHLSS
101: TGVTRITFKL SKQKKEHAWD EKSPKLPKLP KKKVVASTSY PSNVKKLLAT GMLDGAPVKY ISLPRVRELQ GVIHSGGYLC GCTNCNFSKQ RVLSAYEFEL
201: HAGAKTKHPN NHIFLENGRA VYSIVQELKT APHGVFEDVI RNVAGSALCE EGLQAWKASF EQSNSISDRN RIMEHSSVSY NGQSHDESQN LTPCSLTPYS
301: LENHYYREKT YETDALYEPK RIAKKKVTSH VSGTGCHKKV TEGSNRKRDN DLHRLVFMPN GLPDGTELAY YVKTQKLLAG YKQGNGIVCS CCNKEISPSQ
401: FEAHAGMAGR RQPYRHIFIS SGLSLHDIAL SLANGQVITT GDSDDMCSIC GDGGDLLLCA GCPQAFHTAC LKFQSMPEGT WYCSSCSDGS VSSKKATANG
501: PSGNSKPILI RLSRVVKAPE SEIGGCVFCR SHDFSIGRFD ERTVILCDQC EKEYHVGCLR ENGLCDLKEI PQEKWFCCNG CSRIHTAVQS SVSCGPQTIP
601: GPLSEMIRRK DREKGIITED GDTVEWRILS GKSRYPEHLP LLSRAAVIFR ECFDPIVAKS GRDLIPVMVY GRNISGQEFG GMYCLVLIVN SLVVSAALLR
701: IFGQQVAELP MVATSREYQG RGYFQGLFAC VENLLSSLNV ENLVLPAAEE AESIWTNKFG FTKMTEQQLQ NYQKEVQLTV FKGTSMLEKK VPKSLSESTA
801: LI

Best Arabidopsis Sequence Match ( AT2G37520.1 )
(BLAST)

001: MGEGTICLEM PKEENGQLKR DRLDDDTDEG NKGDHFPSKK QAKEASNDDI TSEISNPVAS PVESTSLFRD VSSQPVKSGL VECSGSDFGS EETVSDDASV
101: VGSSQTEQSS DVLPSRFVLE IPKHLSSTGI TKITFKLSKP KKEFDDLPLI KDHTWDAGVV KMPKKKIVSL SYPSNVKKLL ETGILEGARV KYISTPPVRQ
201: LLGIIHSGGY LCGCTTCNFS KVLSAYEFEQ HAGAKTRHPN NHIFLENRRA VYNIVQELKT APRVVLEEVI RNVAGSALNE EGLRAWKASF QQSNSMSDRN
301: YITDHSTVSY LGPGLDESQS LTPCSVENHY FSEKTYAKDT LDEPKRIAKK LTSHVSGTGC HKKVSEGSNR KRDNDLHRLL FMPNGLPDGT ELAYYVKTQK
401: LLQGYKQGSG IVCSCCSREI SPSQFEAHAG MAARRQPYRH IFISSGLSLH DIAMSLANGH VITTGDSDDM CSICGDGGDL LLCAGCPQAF HTACLKFQSM
501: PEGTWYCSSC NDGPISSKKA TTTDPSGNAR PIVIRLSRVV KAPESDIGGC VFCRSHDFSI GKFDDRTVIL CDQCEKEYHV GCLRENGFCD LKEIPQEKWF
601: CCSNCSRIHT AVQNSVSCGP QTLPTPLLDM ICRKDREKGI FTDIGDTVEW RILSGKSRYP EHLPLLSRAA VIFRECFDPI VAKSGRDLIP VMVYGRNISG
701: QEFGGMYCLV LIVNSLVVSA ALLRIFGQEV AELPIVATSR EYQGRGYFQG LYACVENLLS SLNVENLVLP AAEEAESIWT KKFGFTKMSD QQLQEYQKEV
801: QLTIFKGTSM LEKKVPKATT GLSESTTLI

Arabidopsis Description

Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4IQY0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.