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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • plastid 1
  • mitochondrion 2
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d028660_P013 Maize endoplasmic reticulum 75.21 82.59
OQU93136 Sorghum cytosol 54.57 72.77
Os03t0278700-01 Rice cytosol, nucleus 55.64 54.99
TraesCS4D01G205600.2 Wheat cytosol 55.64 51.22
TraesCS4B01G204700.1 Wheat cytosol 55.21 51.18
TraesCS4A01G099600.1 Wheat cytosol 54.68 50.69
HORVU4Hr1G059010.32 Barley plastid 52.23 50.62
CDY18439 Canola nucleus 18.51 27.02
PGSC0003DMT400028730 Potato nucleus 14.47 26.46
CDX93373 Canola nucleus 18.4 26.41
Bra017181.1-P Field mustard nucleus 21.17 24.81
AT2G37520.1 Thale cress nucleus 21.38 24.25
KRH19715 Soybean nucleus 22.55 23.85
KRH32312 Soybean nucleus 22.45 23.68
AT3G53680.2 Thale cress nucleus 20.74 23.13
VIT_08s0040g03340.t01 Wine grape nucleus 20.85 22.35
GSMUA_Achr6P33300_001 Banana plastid 14.47 20.57
KXG20990 Sorghum nucleus 18.94 20.02
KXG19082 Sorghum nucleus 17.98 18.53
KXG31496 Sorghum cytosol, extracellular 1.81 16.19
Solyc10g084650.1.1 Tomato nucleus 23.09 16.09
OQU88240 Sorghum cytosol 5.21 13.07
OQU90556 Sorghum mitochondrion 10.11 11.96
KXG24184 Sorghum nucleus 10.64 9.79
KXG21396 Sorghum plastid 9.04 9.13
KXG39596 Sorghum plasma membrane 11.6 8.66
OQU90997 Sorghum nucleus 12.45 8.49
OQU82646 Sorghum nucleus 11.7 8.07
EES12185 Sorghum nucleus 11.28 7.69
EER95921 Sorghum nucleus 9.89 6.37
EER90748 Sorghum cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:OQU92810EnsemblPlantsGene:SORBI_3001G417500Gene3D:3.40.630.30GO:GO:0003674GO:GO:0003824GO:GO:0008080
GO:GO:0016740InterPro:Acyl_CoA_acyltransferaseInterPro:GNAT_domInterPro:IPR000182InterPro:JasPANTHER:PTHR42672
PANTHER:PTHR42672:SF12PFAM:PF16135PFscan:PS51186ProteinID:OQU92810ProteinID:OQU92810.1SEG:seg
SUPFAM:SSF55729UniParc:UPI000B8BA3F9UniProt:A0A1Z5SA38MapMan:15.5.30::
Description
hypothetical protein
Coordinates
chr1:-:69854058..69861695
Molecular Weight (calculated)
103785.0 Da
IEP (calculated)
6.914
GRAVY (calculated)
-0.391
Length
940 amino acids
Sequence
(BLAST)
001: MQKHQGDRSR STTSGVTINC VRDLLPFLYH VPVTYVSAKT DVSTSTTKPV DPVRVIRTSP LLLIAPLRSQ AWLDGFVTHG GYACACPASA RCGYRDKVLS
101: ALQFEKHAGS ESKNQNGHIL LLNGKSLYDL FHELRDVPAE AFAEEFRAAA GVPMTVPAAE ASSAPPSAHD WETDGVQFDG VTAEPPSAPS PGRGDVEMLT
201: EEMARLCPLG LGRENSSTTE SDTMYGVEGP AAEQIKDEAG SDHVMHDVKV GVTEIKYQLD SDLRNVRGLL STGLLEGFRV TYRKDEVENV GRINGQGYCC
301: GCPKCNYSSN IMNAREFEEH SGQSSHNRND HIFLDTGISL FRLVKELKPY KLNMLGDFIE EKIGFAPNFD EYNKWKASFQ KRKDKDYLDA VASGGCSAQS
401: SRGSAAGEMI YSLRSYLKES ASNTISNLNW SASKRRSGRQ FRQGGTETST PNFSGSPGKG VSGLSTGTSE KKGTEETCSE NTGGPLSIDG VKSDSPVPNV
501: VSPNYCKHDS TNGLSLSSPV TIVQGPLPNY SIGTKSKESK TRDTTLHPLI FKEGGLADNT LLTYKLKNGE VLKQGYKWGT GIICNCCSQE FAPSHFEEHA
601: GMGRRRQPYH NIYTPEGSTL HKLALQLQDH LNSNGFDNAS VSSFSDYPNL TSASGCGRQP STTSGPIVPL KRTLQGRVVE TESCYFCGYG HTTIGNIDPD
701: MIIFCNQCER PCHVKCYNNR VVKKKVPLEI LKEYVCFRFL CCQECQLLRD RLEEGLEKCE EIAFLRRIRS NICWRLLSGM DASRDVKLFM PQVIDIFKDA
801: FVESTDEHSD IFSDMVNCKN GDQEKDFRGM YCALLTASTH VVSAAILKVR MEQIAELVLI ATRRECRKKG YFILLLKSIE ANLRAWNVSL LTAPVDPEMA
901: QIWSEKLGFT ILSAEEKESV LESHPLVMFK NLVLVQKSLA
Best Arabidopsis Sequence Match ( AT2G37520.1 )
(BLAST)
001: MGEGTICLEM PKEENGQLKR DRLDDDTDEG NKGDHFPSKK QAKEASNDDI TSEISNPVAS PVESTSLFRD VSSQPVKSGL VECSGSDFGS EETVSDDASV
101: VGSSQTEQSS DVLPSRFVLE IPKHLSSTGI TKITFKLSKP KKEFDDLPLI KDHTWDAGVV KMPKKKIVSL SYPSNVKKLL ETGILEGARV KYISTPPVRQ
201: LLGIIHSGGY LCGCTTCNFS KVLSAYEFEQ HAGAKTRHPN NHIFLENRRA VYNIVQELKT APRVVLEEVI RNVAGSALNE EGLRAWKASF QQSNSMSDRN
301: YITDHSTVSY LGPGLDESQS LTPCSVENHY FSEKTYAKDT LDEPKRIAKK LTSHVSGTGC HKKVSEGSNR KRDNDLHRLL FMPNGLPDGT ELAYYVKTQK
401: LLQGYKQGSG IVCSCCSREI SPSQFEAHAG MAARRQPYRH IFISSGLSLH DIAMSLANGH VITTGDSDDM CSICGDGGDL LLCAGCPQAF HTACLKFQSM
501: PEGTWYCSSC NDGPISSKKA TTTDPSGNAR PIVIRLSRVV KAPESDIGGC VFCRSHDFSI GKFDDRTVIL CDQCEKEYHV GCLRENGFCD LKEIPQEKWF
601: CCSNCSRIHT AVQNSVSCGP QTLPTPLLDM ICRKDREKGI FTDIGDTVEW RILSGKSRYP EHLPLLSRAA VIFRECFDPI VAKSGRDLIP VMVYGRNISG
701: QEFGGMYCLV LIVNSLVVSA ALLRIFGQEV AELPIVATSR EYQGRGYFQG LYACVENLLS SLNVENLVLP AAEEAESIWT KKFGFTKMSD QQLQEYQKEV
801: QLTIFKGTSM LEKKVPKATT GLSESTTLI
Arabidopsis Description
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4IQY0]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.