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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 3
  • plastid 5
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d037529_P001 Maize nucleus 76.15 74.87
KXG31496 Sorghum cytosol, extracellular 7.52 66.67
OQU88240 Sorghum cytosol 26.32 65.33
Os01t0965700-00 Rice endoplasmic reticulum, extracellular 11.39 51.21
TraesCS3A01G416700.1 Wheat nucleus, plastid 33.62 44.65
TraesCS3B01G451700.2 Wheat nucleus 33.19 43.89
TraesCS3D01G412200.1 Wheat peroxisome 34.05 40.9
TraesCS3A01G514100.1 Wheat plastid 43.18 37.53
TraesCS3B01G582800.1 Wheat nucleus 42.53 36.87
KXG24184 Sorghum nucleus 18.69 17.04
OQU90556 Sorghum mitochondrion 14.5 17.0
OQU82646 Sorghum nucleus 19.87 13.57
KXG20990 Sorghum nucleus 12.46 13.05
OQU90997 Sorghum nucleus 19.23 12.99
EER95921 Sorghum nucleus 18.8 11.98
KXG19082 Sorghum nucleus 11.39 11.62
OQU93136 Sorghum cytosol 8.7 11.49
KXG39596 Sorghum plasma membrane 15.36 11.37
EES12185 Sorghum nucleus 16.22 10.96
OQU92810 Sorghum cytosol 9.13 9.04
EER90748 Sorghum cytosol 0.11 0.66
Protein Annotations
MapMan:15.5.30Gene3D:3.30.40.10UniProt:A0A1B6P6T3InterPro:Acyl_CoA_acyltransferasencoils:CoilGO:GO:0003674
GO:GO:0005488GO:GO:0046872InterPro:IPR013083InterPro:IPR019787InterPro:JasEnsemblPlants:KXG21396
ProteinID:KXG21396ProteinID:KXG21396.1PFAM:PF16135ScanProsite:PS01359PFscan:PS50016PANTHER:PTHR42672
PANTHER:PTHR42672:SF5SMART:SM00249EnsemblPlantsGene:SORBI_3009G056900SUPFAM:SSF55729SUPFAM:SSF57903UniParc:UPI00081ACF23
InterPro:Zinc_finger_PHD-type_CSInterPro:Znf_FYVE_PHDInterPro:Znf_PHDInterPro:Znf_PHD-fingerInterPro:Znf_RING/FYVE/PHDSEG:seg
Description
hypothetical protein
Coordinates
chr9:+:5816023..5832339
Molecular Weight (calculated)
97551.1 Da
IEP (calculated)
9.233
GRAVY (calculated)
-0.317
Length
931 amino acids
Sequence
(BLAST)
001: MPSSSSVPAR PDNVAEATAA TSNGLPVLNP TAALPSPAVR AIAGYGHPAT TGVAAANAMA VRAPGGEPGR NTLEMLLRFA RWNSHPPPPP WAQSFAAGMS
101: PRGQPLVHSP STTSPGWAPS SFASGTPAGP NGGGGSSSVG GRGAAAVAHW YDPGPGSSGA GRGKPQDARP LQITAAATAA TGSSSASKTK SPPLAGDSAQ
201: HERLAPVLAM PTTQGKVAAA ANGRARMRAP KADIGGSSSK PAPSRKPRQR AASKQRIGAG ASLAVVENQP AGPAKSGAST DAQSSGLQIV PVPPPAGNGR
301: KRKQNASAGP TRFSSLGARR SAVNAVAPPA PAPAKKHTIL TWLIDGGFLS DGETVYYVPG DSGGAGKEKI VSGAVTRAGV HCNCCDAVVP LPVFEVHAGR
401: VPGTGQQQQQ VAWEKLLLVS GDSLLQSMQE AWQNEKVRTF HAQAKVRAAL EQEEEKNSQA KRRLLAKHQK KGVVVERIMS PRMEKIKAGE KDSSDDACGV
501: CADGGELLCC DFCTSTFHPE CLAIEVPDGS WSCHYCRCTL CMSNDDQDLS TCQECACKYH ESCRPLLGNG RDIGAYCGEI CKKLSAKLSE VIGVMNSTED
601: GFSWSLLRIH EDEPASSQGM PAVLERNVKL AVALGVLNQC FNPVKDRRTK IDMLHQAVYS LGSQFKRLSY EGFYTMILEK DGEIVSTALL RIHGRKVAEM
701: PFAGTLPAYR KQGMMHRVVS AVEQVLASVQ VETLIIPAIA SMVDTWKRSF SFRPVDPQLR EELKRLSLVV ITGTTMLHKP VASPPPPPPP PLPLPLPQLL
801: PPSPQQAGSS EEWWRKYADP AARLTDDERA FLEMDPDTAP PFRYADLVRG NVSLHNFCRA GNSSSSACGA AVSPGGRSIS AALPAGPGGS AVQPGAGGGS
901: GWRSCGEAAS AMAPQPSYPR RDRSGLLHGM K
Best Arabidopsis Sequence Match ( AT1G05380.1 )
(BLAST)
0001: MEGGGGSGER SRIASNTPRS LKEKSDGVGR TVSSTETRQN YQKRSRMVVS DSESSDEFMK PPPRRSGVDR KTLGAKEKFV RKRDRVEHDR NGYVRRNNEA
0101: SGSFMKMNKL DIFEFDEYDG FDSANLMRKR FDNGSVGVRG RSSFASRRVD SSVGRSGSGR EGLFDRRRNT FVNGTCSASS QEDSSSESDS DEPMRVQGIN
0201: GVLKVKVNNK TNTLAASINP RDAEIYERPP SSRKAQRREN VVVKPPFRKS NNVDNNSESE ESDMSRKSKR KKSEYSKPKK EFNTKSKSTF PELVNPDVRE
0301: ERRGRRGGGT DKQRLRERIK GMLTDAGWTI DYKPRRNQSY LDAVYVNPSG TAYWSIIKAY DALLKQLKDE GVDARPRKDT AAVASVSEEI VNKLARKAKK
0401: TRSEMTKKWK QNSSGSDSEN KSEGGAYTDT SEERIRSSIK LGGKSTKKGR NGADWDELHK KSKRSLYYNN ARPSCGSDSH YLHGRKTKKI GRCTLLVRSS
0501: KDKKNPAING FNPYSGKRTL LSWLIESGVV QLRQKVQYMR RRGAKVMLEG WITREGIHCD CCSKILTVSR FEIHAGSKSC QPFQNIYLES GASLLQCQVR
0601: AWNMQKDATN LALHQVDTDG DDPNDDACGI CGDGGDLICC DGCPSTYHQN CLGMQVLPSG DWHCPNCTCK FCDAAVASGG KDGNFISLLS CGMCERRYHQ
0701: LCLNDEAHKV QSFGSASSFC GPKCLELFEK LQKYLGVKTE IEGGYSWSLI HRVDTDSDTN SQMSAQRIEN NSKLAVGLAI MDECFLPIVD RRSGVDLIRN
0801: VLYNCGSNFN RINYTGFYTA ILERGDEIIS AASLRFHGMQ LAEMPFIGTR HIYRRQGMCR RLFDAIESAM RSLKVEKLVI PAIPDFLHAW TGNFGFTPLD
0901: DSVRKEMRSL NTLVFPGIDM LQKPLLHEEN IIAPAAAGDA MISEVETEKK SEFTSSVEIG PYAVEGDEFV ADAANCYKDI LASDEDNILV SVETAMGTIC
1001: KPKDELSRHF RGEESGISSS PCQITLKSGT KHVLGHICDD TGSSCEDGLT DVNVEADASL LSQEIQQASA SFKVENNLSL SISGRGSSDL SSISQEVKSE
1101: QTSSNLDGVP SCKDYNILVP GAKLDKSKDD AFADGFLL
Arabidopsis Description
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein [Source:UniProtKB/TrEMBL;Acc:Q9ZW00]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.